Gasterosteus aculeatus (three-spined stickleback): 120816896
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Entry
120816896 CDS
T07457
Symbol
arhgef6
Name
(RefSeq) rho guanine nucleotide exchange factor 6 isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04518
Integrin signaling
gat04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
120816896 (arhgef6)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120816896 (arhgef6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120816896 (arhgef6)
Membrane trafficking [BR:
gat04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120816896 (arhgef6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
RhoGEF67_u1
SH3_1
SH3_9
CH
PH
SOS1_NGEF_PH
HAUS-augmin3
IcsB_M
DH_Alsin
Mis12
Motif
Other DBs
NCBI-GeneID:
120816896
NCBI-ProteinID:
XP_040028511
LinkDB
All DBs
Position
4:6124159..6143555
Genome browser
AA seq
777 aa
AA seq
DB search
MNPEEQTVTWLISLGVLSSPKKNVADPEEFLKTSLKDGVVLCKLAERLVPGFTPKYCQDP
RAEADCITNIKEFLKGCSSLKVEGFEPEWLYTGENFGKVLTTLLAFNFATQECAAERSCP
QSAAHSPRQSTSSHTLSSAKSKGSLRRRSKSVEMSENGGGGQLLVKARFNFKHNNEDELS
FNKGDLIHVMRQEDGGWWEGTLGGKTGWFPSNYVREIKPCEKPTSPKGTQLTKNYYSVVV
HDILEHEREFVKELQAVLNSYLRPLQASDKLSSADSVALGGNLEEILTFQQGLCVALEDC
TKVPEGQQRVAGCYLNLMCQIKNLYMAYCSSHPSAVCILTDHSEELDKFMESQGASSPGI
LTLTTSLSKPFMRLDKYPTLMQELERHVEEAHPDYADIVKASAAFRSLVTQCQELRKRKN
LELQILSEPVRGWEGDSMKSLGHVAYMSQVHVKNGSNEEKEERYVMLFPHVVVMLSASPR
MSGFIYQGKLPLTGTTVTRHAEDAENGHYALDITGSVVDRFTVFCSSAQELQEWLEHLQP
FTKGGSPVGTISKTVEGKPLSMVGGPTHASHLGSVSAASRGPLEPPKTSKPWSLSCLRPA
PPLKPSAALGYKERMSYIMKDSSKSPRPIKKFLPGNRKKERKPSDDEVQTRKSTAALEED
AQILRVIEAYCTGASLHQTTAGVRLSVRKECVPQVLLPEEEKIIVEEMKSNGQTVIEEKS
LVDAVYALKDEVHELKKESKWMKQFMEEEQKSRKDLERVVRKLAKQKNDLAWDDSGH
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaggagcagacggtgacctggttgatatcgctcggtgtgctcagctcgccc
aaaaagaacgtagcggacccggaggagttcctgaagacgtcgctgaaggatggggtcgtc
ctgtgcaagctcgcggagcggctcgtgcctggcttcactcccaagtattgccaggacccg
agagctgaagccgactgcattaccaatatcaaggagtttttaaaaggatgctcttccttg
aaagtggaggggtttgaaccagagtggctgtacactggtgaaaattttggcaaggtcctg
accacgttgctggcattcaactttgccacacaggaatgtgctgctgagagatcatgtccc
cagtccgccgctcactctcctcgccagtcgacgtcttctcacacgctctcctctgccaag
tccaaaggctctctgcgtagacgatccaaatcagtggagatgtctgagaacggaggaggc
gggcagctgctggtgaaggctcgcttcaacttcaagcacaacaatgaggatgagctgtcg
ttcaacaaaggcgacttgatccacgtgatgcggcaggaggacggcggctggtgggagggg
acgctcggcggcaagacgggctggttccccagcaactacgtgagggagatcaaaccctgc
gagaagccaacgtctcctaaaggcactcagctgaccaaaaactactacagtgtggtggtg
cacgacatcttggaacacgagcgggagtttgtcaaagaattgcaggcggtgctcaacagt
tatctacgacccctgcaagccagcgacaagctgagcagtgcagacagcgtcgccctcggt
ggaaacctggaggagatactcaccttccagcagggactgtgtgtggctttggaggactgt
accaaagtcccagagggccagcagcgagtggccggctgctatttaaacctcatgtgtcag
atcaagaacctgtacatggcttactgttccagccatccttcagctgtctgcatcctcact
gaccacagcgaggaactggacaagttcatggagagccaaggggccagttctccagggatc
ctgaccctgaccaccagtctcagcaagcccttcatgaggctggacaaataccccacgctg
atgcaggagctggagagacatgtggaggaagcccacccagactatgctgacattgtaaaa
gcttcagcagccttcaggagcctggtgacgcagtgccaggagctgcggaagcgcaagaac
ctggagctccagatcttgtcggagccggtgcgcggctgggagggagacagcatgaagagc
ctgggtcacgtggcctacatgtcccaggtccacgtgaaaaatggctccaacgaggaaaaa
gaggagcgttatgtgatgctcttccctcatgtggtagtcatgctgtccgccagtccccgt
atgagtggctttatttatcagggaaaactgccactgacaggcactacagtaacgagacat
gcagaggatgcagagaatggacactatgccttggacattacaggaagcgtcgtcgatcgt
tttacagtgttctgcagtagtgcccaggagttacaagaatggttagagcaccttcagccc
tttaccaaaggaggaagccctgtaggaaccatctcaaagacggtagaaggcaagccgctg
agcatggtcggcggccccacccacgcgtcccacctgggcagcgtcagcgccgccagccgc
ggccccctggagccgccgaagaccagcaagccgtggtccctcagctgtctgcgcccagcg
cctcccctcaaaccctccgccgcgctgggatacaaagagaggatgtcttatatcatgaag
gactccagcaagagcccgcggcccataaagaagttcctgccgggcaacaggaagaaagaa
cggaagccgtctgacgacgaagttcaaacgaggaaaagcacggcggcgctggaggaggac
gcccagattctgagggtgatcgaggcgtactgcacgggggccagcctgcatcaaaccacc
gcaggggtgcgtctatcggtgcggaaagagtgcgtccctcaggtgcttctgccagaggaa
gagaagatcattgtggaggagatgaagagcaacggccagacagttattgaggaaaagagc
ctggttgatgccgtgtacgctctgaaggacgaggttcacgaactgaagaaggagagtaag
tggatgaagcagtttatggaggaggagcagaagtctcgcaaagacctggagagggtggtt
cgaaaactggccaagcagaagaacgacttggcttgggacgacagcggccactga
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