Gasterosteus aculeatus (three-spined stickleback): 120816987
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Entry
120816987 CDS
T07457
Symbol
slit3
Name
(RefSeq) slit homolog 3 protein
KO
K06850
slit 3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gat00536
]
120816987 (slit3)
Glycosaminoglycan binding proteins [BR:
gat00536
]
Heparan sulfate / Heparin
Axon guidance molecules
120816987 (slit3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
Laminin_G_2
hEGF
Laminin_G_1
LRR_9
EGF_TEN
LRRCT
LRRNT
LRR_14
EGF_DL_JAG
EGF_Teneurin
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
120816987
NCBI-ProteinID:
XP_040028631
LinkDB
All DBs
Position
IV:1069934..1130080
Genome browser
AA seq
1494 aa
AA seq
DB search
MEPDSNVLIIVSTLTSNNPERWREGLLNSWSFNDRCGECERKCGCSQKENVKNLQLDSNH
IGCIEDGAFRALRDLEILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCQLSWLSD
WLRVRRGLAPFTQCMAPANMRGLNVPDVQKKDFLCTGPAQTEARTCVPQVAVCPPSCSCN
NNIVDCRRKSLTEIPANLPEAIVEIRLEQNLIKNVPAGAFSAYKKLKRIDLSKNQISDIA
DDAFSGLRSLTSLVLYGNKITELPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNL
LSLYDNKLQSISKGLFAPLRSIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHP
RRLANKRISQVKGKKFRCTGRRPARTRYGCRSLDKADVELPASRALFPLAQGIVGIDDRI
EKIHCSSPSSPLFSSKVCLIKGSAARHTSMVTKGLLTFMLSLHLVLFCLDGPVGSMFYNS
CPTKFLHHSPFRRLNDNEIAVLEPAGMFKKLPNLKKINLSNNKLRDVRDGAFDGAEGVSE
LLLTGNKLTGLQGRMCRGLSGLKTLMLRSNQLSCIDNGTFTGLSSVRLLSLYDNRISSIA
PGAFSTMHSLSTINLLSNPYVCDCHLAWLGQWLKKTRVVSGNPRCQKPAFLKEIPIQDVA
SPDFTCDGAEDNGCLPSSGCPDVCTCTDGVVRCSNRGLHSLPRGVPKDTTELYLEGNMLA
YVPKELAGLRQLSLVDLSNNSISILAPFTFSNMTQLATLILSYNQIRCIPVHAFDGLKSL
RLLTLHGNDLSTVPEGAFNHLTALSHLALGANPLYCNCELRWLSQWVKAGFKEPGIARCS
GPPDMADRLLLTTPLNRFQCKGPVDVSLMSKCAPCLALPCLNNGTCVAEAAGSYRCTCPY
GFKGQRCETPINACVSFPCSHGGTCHVPPGNEDHFSCVCPPGYEGQRCEMNPDDCEDNDC
ENNSTCIDGVNNYTCVCPPNYTGDLCDEVVDSCLRGFDPCQHDSKCVHVGRAYRCECLPG
YVGRHCEQDYNDCLENKCQHGAQCVDAVNGYTCVCKQGFSGLFCENPPPMILLQTSPCDQ
SDCQNGAQCLVVAGEPVCRCMPGFYGSKCDKIATVHFLGRDGYVELPSAKLRPTAHISLQ
VATDKDNGILLYKEDHDPLALELYQGHIRLIYDIANYPPTTVYSVESVNDGLFHAVELLI
QNRSLSLVVDNGAPKSLGKLARQPSVDHNTQLYIGGVPSEVVASGLRPGPDRSPQAFNGC
IHNVRINGEPQDLSYRAAGAARPRGLEGKAEGVLAGCHSCSVCAQGACREGGETGVTCDC
PPGRSGALCDQTTAPRACHDSRCVHGQCVPKGQSYSCQCSEGYQGQYCDRRQEPPPCRAP
RCTHGECRVSEAGEPVCHCQPGYAGPTCDAELSCQGEMVREPLRRHHPMTTCTSTAKIAR
VDCPRSCQAAAPPGFCCGVTKSRRRKAVFRCTNGTTYSEEMETPVECGCSACAL
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atggagccggactcaaatgtcctgataattgtctcaactttgacttccaacaaccctgag
aggtggagagaaggacttttaaacagctggagctttaatgacagatgtggggaatgtgag
aggaaatgtggctgcagccaaaaagaaaatgtcaagaacctgcaactggacagcaaccac
atcggctgcatcgaggatggagcgttccgagcgctgcgcgatctggagattctcaccctc
aacaacaacaacatcaccctcatcccgctgtccagcttcaaccacatgcccaagctgcgg
accctgcgtctccactccaacaacctccactgtgactgtcagctgtcctggctctccgat
tggctcagagtccggcggggcttggctcccttcacccagtgcatggcccccgccaacatg
agaggtctcaacgtcccagatgtgcagaagaaggattttctctgcactggtccggcgcag
acggaggcgaggacctgcgtccctcaggtggccgtgtgtcctcccagctgcagctgtaac
aacaacatagtggactgtcgccgcaaaagcctgactgagatcccggccaacctgcccgag
gccatcgtggagattcgcttggagcagaacttgattaaaaacgtcccagctggagccttt
tctgcctacaagaagctcaagagaattgacttgagtaagaaccagatttctgacattgct
gacgacgctttcagtggcctccgctcactcacctcactggttctgtatggaaacaagatc
acggagctgcccaaaggactgtttgatggactcgtgtccctgcagctgctgctgctgaac
gccaacaaaatcaactgtttgagagtcaacaccttccaagatctgcagaacctgaacctg
ctgtcgctgtacgacaacaagctgcagagcatcagcaaagggctgttcgccccgctgcgc
tccatcaagactctccatctggcccagaatcccttcatgtgcgactgtcacctcaagtgg
ttggctgactacctgttcgacaaccccattgagaccagcggggcgcgctgcagccacccc
agaaggctggcgaacaagcgcatcagccaggtgaaaggcaagaagttccggtgcacaggt
aggagaccagctcgcacacgctacggctgcaggagtctcgataaagcagacgtggagctt
cctgcctcccgagcgctttttcccctggctcagggcattgtgggcattgatgaccgcata
gaaaagattcactgctcttctccatcttctcctctcttctcttctaaagtatgtttaatt
aagggttctgcagcacgtcatacttcaatggtcaccaaaggcctcttgaccttcatgctg
tctctccatctcgtgttgttttgtctggatggtccagttggttccatgttctataattca
tgtccaactaaattcctccatcattctcccttcaggcggttaaacgacaacgagattgcc
gtcctggagcctgctgggatgtttaagaagctgccaaacctgaagaagataaacttaagc
aacaacaagctgagggacgtgcgtgacggtgcctttgacggagcggagggcgtctcggag
ctgctgctgacggggaacaagctcacaggactgcagggacgcatgtgtagaggcctcagt
ggcctgaagacgctaatgctgcgcagcaaccagctgagctgcatcgacaacggcaccttc
acgggcctgagctctgtgcgtctgctctcgctgtacgacaaccgcatcagcagcatcgcg
ccgggagccttctccaccatgcactccctgtccaccattaacctcctgtccaacccgtac
gtgtgcgattgccacctggcctggctgggccagtggctgaagaagacgagggtggtcagt
ggaaaccctcgctgtcagaagccggccttcctgaaggagatccccatccaggacgtggcc
tcgccggacttcacgtgcgacggtgcagaggataacggttgccttccttcgtccggctgt
ccggacgtctgcacgtgcacagacggcgtggtgcgatgcagcaacagaggtctgcactct
ctgcccagaggcgtccccaaggacaccacggagctatacctggagggtaatatgctggcg
tatgtgcccaaggagctggcaggtctgaggcagctgtcgttggtggacctgagcaacaac
agcatcagcatattggcccccttcaccttcagcaacatgactcaactagccacactcatc
ctgagttacaaccagatccgctgcatcccggtccacgccttcgacgggctcaagtccctg
cgcctgctaactctccatggcaacgacctttcaaccgtaccggaaggagctttcaaccac
ctcaccgctctgtcccacctggctctcggcgccaacccgctctactgtaactgcgagctg
cgctggctgtctcagtgggtcaaggctggcttcaaggagcccggaatcgctcgttgctcc
gggccgcctgacatggccgaccggctgctgctcaccacgccgctcaaccgctttcagtgt
aaaggtccagtagacgtcagcctgatgtcaaagtgcgccccctgcctcgcacttccctgc
ctaaacaacggcacctgtgtggcggaagcagctggctcgtaccgctgcacctgtccgtat
ggattcaagggtcaacgctgtgagacgcccatcaacgcctgcgttagcttcccctgctcg
cacggaggaacctgccacgtcccgcctggcaacgaagaccacttcagctgtgtgtgtcct
ccaggttacgagggccaacgttgtgagatgaacccggacgactgtgaagacaacgactgt
gagaacaactccacctgcatcgacggtgtcaacaactacacctgcgtctgcccccccaac
tacacaggtgacctgtgtgacgaggtggttgattcttgcctccgtggtttcgacccctgt
cagcacgactcaaagtgtgtccacgttggccgcgcttacaggtgtgagtgtctgccgggc
tacgtgggacgccactgtgagcaggactacaacgactgcctggagaacaagtgtcaacac
ggagcgcagtgcgtggacgccgtcaacggctacacctgcgtctgcaaacaggggttcagc
gggctgttctgtgagaaccccccgcccatgattctgctgcagaccagcccctgcgaccaa
tcggactgccagaacggcgcccagtgcctggtggtggccggggagcccgtctgccgctgc
atgcccggtttctacggcagcaaatgcgacaagatcgccactgttcacttcctgggtcgg
gacgggtacgtggagctgccgagcgccaagctccgccccacggcgcatatttcactgcag
gtggccacggacaaagacaacgggatcctgttgtacaaggaggaccacgaccctctggct
ctggagctctaccagggacacatccgcctcatctacgacatcgccaactacccgcccacc
accgtgtacagcgtggagtcggtgaatgacggactcttccacgctgtcgagcttttgatt
cagaatcgttctttgagcctggtggtggataacggggcccccaagagcctcggcaagttg
gcccgccagccctccgtggaccacaacacccaactctacatcggaggagtcccgtcggag
gtggtggcctcgggtctgcgtcccggcccggatcgttcccctcaggcctttaacggatgc
atccacaacgtccgaataaacggggagcctcaagacctgagctacagggccgcaggagca
gcccgaccgcgggggctggaggggaaggccgagggcgtcctcgcaggctgccattcctgc
agcgtgtgcgctcagggagcgtgcagggaggggggcgagacgggggtgacgtgcgactgt
cccccgggacgcagcggcgccctgtgcgaccagacgacggcaccgcgcgcctgtcacgac
agcagatgtgtccacgggcagtgcgtgccgaagggacagtcctacagctgccagtgcagc
gaaggctaccaggggcagtactgcgaccggcggcaggagccccccccctgccgggcgccg
cgctgcacgcacggggaatgccgcgtctccgaggccggagagcccgtctgccactgccag
ccggggtacgccgggcccacctgcgacgcagagctctcgtgtcagggagagatggtgagg
gagccgctgaggcgccaccacccgatgacgacgtgcacgtccacggccaagatcgcccgc
gtggactgtccccggtcctgccaggccgcggcccccccgggcttctgctgcggggtgacc
aagagccggaggaggaaggcggtgttccgctgcaccaacggcacgacgtactccgaggag
atggagacgcccgtggagtgcggctgctccgcgtgcgcgttgtaa
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