Gasterosteus aculeatus (three-spined stickleback): 120817035
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Entry
120817035 CDS
T07457
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120817035 (rlim)
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120817035 (rlim)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120817035 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
120817035
NCBI-ProteinID:
XP_040028726
LinkDB
All DBs
Position
IV:12079368..12088577
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AA seq
785 aa
AA seq
DB search
MEGSDSLEQSGGDQPESQRRRQRDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFSRLQQIKDGPDQHSNNTNAPSTESVEDPVEPPENSEDPANGDSLLDWLNTVRRTG
NTTRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAGEGEQESQESPEGQEV
VANGDPQVSVADPQGSVADPQLSVADPQLSVAEPQLSVAEPQLSVAEPQLSVSEPQLSVS
EPQVTVADPQVTVADPQVTVADPQVTVADPQVTVADPQVTVADPQVTVADPQLSIADPQI
SIADPNRTMTEPHFPMADSAVSMADPAVSIAEQQVPMELEVVEEPVVEELGVIVEPQPEL
QDVSQEMFGEPPWSPVTLTVQPPLSPLPRRGQRRARSPSPEPRRTRARTARSRSPLNLDQ
RNSNNAHSAQGLDSPTNTPLVPQMEGSSRTRQHVPSRQSTADSDVQPSRAGAETVPEPGN
MASQEGEAAVGEGAAAGRRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLY
ESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGEL
GYLMDSDSDSSDSNRGASTPADVAEALNHPDATPAPVADVDEAPVATGVRARTAESEIDD
GLSTAPPPSGGRARPRPPIGLEEPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLAMR
NFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSAN
RESVV
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtccgacagtctagagcagagtggcggtgaccagccagagtcacaacgcagg
aggcagcgggaccgcctggacagggaggaggccttctaccagtttgtcaacaatctaagt
gacgaggactatcgtctcatgagggacaacaatctattgggcaccccgggagaggtgaca
gaggatgagctgtttagtagacttcagcaaataaaggatggtcctgatcagcatagtaac
aatactaatgctcccagcactgaaagtgtagaagatccagttgaaccaccagaaaactct
gaggatcctgccaatggggacagtctcttagattggctgaacaccgtgaggcgcacaggc
aacacaaccagaactggtcatcgtggaaaccagtcatggcgggccgtaagccagaccaat
ccaaacagtggcgattttcgcttcagcctggaaatcagtgtgaatcgcaatctggctgaa
cagcaggcagctggggaaggggaacaagagtctcaagagtctccagagggtcaagaagtg
gtggcaaatggtgatccccaggtgtccgttgcggatccccaggggtccgttgcggatccc
cagctgtctgttgcggatccccagctgtctgttgcggaaccccagctgtctgttgcggaa
ccccagctgtctgttgcggaaccccagctgtccgtttcggaaccccagctgtccgtttcg
gaaccgcaggtgaccgttgctgatccgcaggtgaccgttgctgatccgcaggtgaccgtt
gctgatccgcaggtgaccgttgctgatccgcaggtgaccgttgctgatccgcaggtgacc
gttgctgatccgcaggtgaccgttgctgatccccagttgtccattgctgatccccagata
agcattgccgatcccaataggaccatgaccgaaccccattttcccatggctgattccgcg
gtgtccatggctgatcctgcagtgtccattgcagaacaacaggtgcccatggagttagaa
gtagtggaggaacccgtggttgaggaattgggtgtcatagtggaaccacagcctgaatta
caagatgtttcacaagagatgtttggagaaccaccctggtcacctgtcaccctaacagta
cagccaccgctttctcctttaccacgcagaggacaaaggagagcccgcagccccagtcca
gagcctcgcaggactagggcacgtacagccaggagccgctcccctctcaatctggatcaa
cgtaattcaaataatgctcacagtgctcaaggcctcgactctcccacaaatacgcctctt
gtgcctcaaatggagggcagttctcggactcgacaacatgttccttctaggcaaagcact
gctgacagtgatgttcaaccatctcgggcgggtgcagaaacggtcccagagcccggaaat
atggcatctcaggaaggagaagctgctgtgggtgaaggggctgcagcagggcgccgtccc
cctactattatgcttgatctccaggtgcgccgtgtgcgtccaggcgaatatcgccaaaga
gacagcattgccagtcgaacgcgctcacgctctcagaactcgaacaacacattcctttat
gagagtgaacgtggtggatttcgtaggactttctcacgctctgagcgtgctggtgtgagg
acctacgttagcactattcgcatccctatccgaagaatctctgatgcaggtttgggagag
gcaacctcaatggctcttcaatctatgattaggcagataatgactggcttcggtgaactt
ggctacctcatggattcagactctgactcttcagattcaaaccgtggagccagcacacct
gcagatgtagctgaagccctcaaccacccagatgctactcctgctcctgttgctgatgtt
gatgaggcacctgtggctacaggagtcagagcaaggacagctgaatctgaaattgatgac
ggcctttcaactgctccaccgccctctgggggaagggctcgacctagaccgcctatcggc
ctggaggagccgagctcattgcccttcctccgtcttgcccatttcttcctcctgaatgat
gatgacgaggaccagccccaagggctaaccaaagagcagattgacaacctcgcaatgcgc
aactttggtgagagtgatgccttgaagacttgcagtgtatgcataacagaatatgcggaa
ggtaacaagctacgtaagctgccctgctctcacgagtatcacgtgcactgcattgatcgc
tggctctccgaaaactccacttgccccatctgccgcagggctgtcttggtatcggccaac
agagagagtgtggtgtag
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