Gasterosteus aculeatus (three-spined stickleback): 120817080
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Entry
120817080 CDS
T07457
Symbol
lrrc4.1
Name
(RefSeq) leucine-rich repeat-containing protein 4
KO
K16351
netrin-G2 ligand
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120817080 (lrrc4.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120817080 (lrrc4.1)
Cell adhesion molecules [BR:
gat04515
]
Immunoglobulin superfamily
NGL family
120817080 (lrrc4.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_14
Ig_3
LRR_9
ig
LRRNT
V-set
Ig_2
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
120817080
NCBI-ProteinID:
XP_040028807
UniProt:
A0AAQ4RZI8
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Position
IV:complement(30566612..30571421)
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AA seq
936 aa
AA seq
DB search
MSLLGRVAVHRARKAALLCVVFLMARAWSSTSLALAGAAVSQGPQGCPPQCSCSNQQGKV
VCTRRGLSRVPPGIPANTRHLNLMENAIEAVQADSFRHLHHLEVLQLGRNAIRQIEVGAF
NGLTSLNTLELFDNRLTVVPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLG
ELRKLEYISEGAFEGLQNLKYLNLGMCNIRGDMPNLSPLKGLEELEISENHFPDIKPGSF
KGLRSLKKLWVMNSQITVIERNGFDDLSSLVELNLAHNNLSAVPHNLFSPLRYLVELHLH
HNPWNCGCEAVWLARWLRESIPTNSTCCGRCHSPVSMRGRQLVEVDRGEGAATQCSAPFI
ADAPRDLNISAGRVAELRCRTAPMSSVRWLLPNGTVLTHASGHPRISILNDGTLNFSNVL
AVDKGTYTCMVSNAAGNSNASAYLNVSAAELNTSNLSYFTTVTVEVLGPTTEMPKPRTTS
TTAAAVGAGVAGGGGIGQGATTTTASPSVFQPVFISTPTVLLQSTNSPAGAAKTSVAPGL
QAVTRKPGPGPSLDEVMKTTKIIIGCFVAVTLMAAVMLIAFYKLRKRHQQRSTVAAARTV
EIIQVDEEDLPPPASAAQETSLTLPEIRDHNSIHKLDFISHKTDYSFHKPKVEYKPQPDF
TLHKPKAEYTTYKPNMDFSGPKYIPDYSTHKSTPDFSLHRPKPDYSPFRPDYSTHKPKAE
YSQYKPDYGTHPRQKTDLSPFKRDYSTQPKPKHDYSPLKSEYNMPHNPKAEYSPFKPDYG
THPRSKPEYSPFKPDYSTQPKPKTDYNAQRSKTDNTYNPRDPYSPHVTATDYNAFKTDFS
PHKAEYSAFRSDFSPHTQRPKLDYSPHKVEYSPHKMDYSTLKPKYNTYKPTGQGARWTDN
NVGNSLPRTLPSAITALAEPFVIKTHTKEKVQETQI
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcctggggcgggtagctgtgcatcgtgccaggaaagccgccctgctctgtgta
gtcttcctgatggcgcgagcgtggagcagtacctccctggccttggcgggggcggcggtg
tctcagggaccccagggctgtccaccacagtgttcctgtagtaaccagcaggggaaggtg
gtgtgcacgcgacgtggcctgagcagagtgccgcccggcattcctgccaacacgcgccac
ctcaatctgatggaaaacgccatcgaggcggtgcaggcggactccttccgccacttgcac
cacctcgaggtgctccagctcgggcgaaacgccatacggcagattgaggtgggcgcgttc
aacggactcaccagcctcaacacgctggagctctttgacaaccgattgacggtggtgccc
agtggggcctttgagtacctgtccaaactccgagaactttggctgaggaacaatcccatt
gaaagtatcccttcctacgccttcaaccgggtgccctccctaatgcggttggaccttgga
gagttacgaaaactggagtacatctcagaaggcgcttttgagggcctgcagaacttaaag
tacctcaacctgggcatgtgcaacataagaggggacatgccaaacctaagtcccctcaag
ggcctggaggagctagagatctctgaaaatcacttcccggatataaagccgggctctttc
aaaggcctgcgctcgctgaagaagctctgggtgatgaactctcagattacggtgatagag
cgcaacggttttgatgacctgtcttcattggtggagctgaacctggcccacaacaacctg
agcgctgtgccacacaatctgttctccccgctcaggtacctggtggagctccatctccac
cataatccttggaactgtggttgcgaggcggtatggttagcccgctggctaagggagtcc
atccctactaactcaacgtgctgtggacgttgtcactcacctgtgagcatgagaggtcga
cagctggttgaggtggaccgaggtgagggcgctgcaacccaatgctctgcaccatttatt
gccgacgcgccaagggacctgaacatctcagcggggagagtggctgagctacgttgccgc
acagccccgatgtcttcagtgcgctggctgctacccaatgggactgtcctgacacatgcc
tccggtcacccgagaatatcgatcctgaatgacggcaccctcaatttctcaaatgtcctg
gctgtggacaagggcacgtacacctgcatggtgtccaatgccgcggggaactccaacgcg
tcggcctacctcaatgtgagcgcggccgaacttaacacgtccaacttgagttactttacc
acggtgaccgtggaagtcttggggccaaccactgaaatgcccaaacctagaaccacctcg
actacagccgctgcggtgggtgccggggtagctggaggaggagggataggccaaggggca
acaactacgactgcttccccgtcagtctttcagccggtcttcatctccacgccgactgtg
ctactgcaaagcaccaacagccctgcgggggcagcaaagacatccgtagcgcccggactc
caggctgtcactcgcaaaccggggcccggcccaagcctggatgaagtgatgaagaccaca
aagatcatcataggttgcttcgtagcagtgacactgatggccgcggtgatgctcattgcc
ttctataaactgagaaagcgccaccaacagaggagcactgtggccgccgctcgcaccgtg
gagattatccaggtggatgaggaagaccttcctccaccggcgtccgcagcccaagagacg
tctctcacgttgcctgagatccgggaccacaacagcatacacaaactggacttcatcagt
cacaagactgactacagctttcacaaacccaaggttgaatacaaaccccagccggatttc
acccttcataagcccaaggcggagtataccacctacaagccaaacatggacttcagcggc
cccaaatacatcccggattacagcactcacaaatcgacaccagactttagccttcataga
ccaaagcctgactacagcccatttagaccggactacagtacccacaaaccgaaagcagaa
tacagccagtacaaaccagactatggcactcatccaagacagaaaaccgacctcagccca
ttcaaacgagattacagcacccaaccaaaacctaaacacgactatagcccgttaaagtca
gagtacaacatgccacataacccgaaagctgaatacagtccattcaagcctgactatggc
acccacccaagatctaaacccgaatacagcccgttcaagcccgactacagcactcagccc
aagcccaaaacagactacaacgcccagagatctaaaacggacaatacctacaaccccaga
gacccttactccccccacgtgactgcaaccgattacaacgccttcaagaccgacttcagc
ccccacaaagcggaatacagcgccttcaggtctgacttcagtccgcacactcagagacct
aagcttgattacagccctcacaaggtggagtacagccctcacaaaatggactacagcact
ctaaagcctaaatacaatacctacaaaccaactggccaaggggctagatggacagacaac
aatgttgggaactctttgcctcgaaccttgcccagcgccatcacagcgctggctgagccc
tttgtcataaagactcacaccaaggagaaggtgcaggagacgcagatttaa
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