Gasterosteus aculeatus (three-spined stickleback): 120817124
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Entry
120817124 CDS
T07457
Symbol
stx5a
Name
(RefSeq) syntaxin-5a isoform X1
KO
K08490
syntaxin 5
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120817124 (stx5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120817124 (stx5a)
Membrane trafficking [BR:
gat04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
120817124 (stx5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
BOS1_GOSR2_MEM11-like_N
Prominin
HrpB7
Apolipoprotein
SEO_N
DUF16
Syntaxin
ABC-2_memb_rel
DUF2207_C
ATG17_like
Use1
MCPsignal
DUF6746
AI-2E_transport
Motif
Other DBs
NCBI-GeneID:
120817124
NCBI-ProteinID:
XP_040028910
LinkDB
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Position
4:complement(5292154..5297335)
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AA seq
329 aa
AA seq
DB search
MTCRDRTLEFQSACKSLQSRPNGVQPSKPALSALRQRSDFTVMAKRIGKDLSNTFAKLEK
LTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDLVRSRGAPGGRHIQTHSNT
IVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSQPPVSSSPLMANNFRSRKKGAQ
EPHAAREPRNGYQGNTTSNLKESSVLMQDESRSMGDVAIDMDSQTNPLQLQLIDEQDSYI
QSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDANVEDTQLNVESAHTEILKYF
QSVSSNRWLMIKIFLVLVIFFIVFVVFFA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgccgggatcggaccctcgagttccagtcagcctgtaaatctctccagagcaga
ccgaatggagtccagcccagtaaaccggcgctcagcgctctccggcagcgcagtgacttc
actgttatggccaagagaattggaaaagacttgagcaacacgtttgccaaattggaaaag
ctcactattttggcaaaaagaaaatctttatttgacgacaaggcggtggagatcgaggag
ctaacgtacatcatcaaacaagacatcaacagtctaaacaaacagattgcacagctgcag
gacttggtgaggtcccgcggggctccaggtggccgacacatccaaacccactccaacacc
atagtggtgtcattgcagtccaaactggcttcaatgtccaatgacttcaagtcagtccta
gaagtccgaacagagaacctgaagcagcagcgcagcaggagagagcagttctcgcagccc
ccggtctcgtcttctcctctgatggccaacaactttaggagccgcaaaaaaggggcccag
gagccgcatgcagctcgtgagccgcgcaatggttaccagggcaataccacctcaaattta
aaagagagctcggtcctgatgcaggacgagtcccggagtatgggcgacgtagccatcgat
atggactcccagaccaatcccctgcaactccagcttattgatgagcaggactcgtacatc
cagagccgcgcagacaccatgcagaacattgaaagcaccattgtggagctgggctctata
ttccagcagctggcacacatggtcaaggagcaagaggagaccatccaaaggatcgacgct
aacgtggaggacacccagctcaacgtggagtccgcccacacagagatcctcaaatacttc
cagtcagtctcctccaaccgctggctgatgatcaagatctttctcgtccttgtcatcttc
ttcatcgtctttgttgtcttcttcgcctga
DBGET
integrated database retrieval system
