Gasterosteus aculeatus (three-spined stickleback): 120817158
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Entry
120817158 CDS
T07457
Symbol
tnpo3
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03013
Nucleocytoplasmic transport
gat03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120817158 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120817158 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gat03016
]
120817158 (tnpo3)
Transfer RNA biogenesis [BR:
gat03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
120817158 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
mTOR_dom
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
120817158
NCBI-ProteinID:
XP_040028961
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Position
IV:33729010..33741514
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AA seq
923 aa
AA seq
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MERGKPNLTLVYQAVQALYHDPDPSGKERASVWLGELQRSMYAWEISDQLLQLKQDVESC
YFAAQTMKMKIQTSFYELPPETHNALRESLLTHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYNNDISSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTV
VTLLTSCVEKAGSDEKMLIKVFRCLGSWFNLGVLDSNFMASNQLLMVLFQVLQRDETSTN
LHEAASDCVCSSLYAIENVESNMGLALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKINDAA
LHNIFRPYIQRLLHCLARHCQLDPDHDGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLKEGNPSWEVTEAVLFIMAAIAKSVDPENNPTLSEVLQQVVLLPETVHMAVRYT
SIELVGEMSEVVDRNPRFLDPVLNYLMKGLREKSLASAAAKAIHNICSVCRDHMAQHFQG
LLDIARALDSFVLSTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVIALKKLLAEES
TNGKSADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNTHQADNRIVE
RCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCMPTFQLLEQQNGLRNHPDTVDDLFRLATRFVQRSPVTLLSSSIIVHIIQCA
IAATSLDHRDANCSVMKFVRDLVHTGVANDHEEDFEVRKQLIGQAMEQHGQQLITQLMHS
CCFCLPPYTLPDVAEVLWEVMVFDRATFCRWLENALKGLPKETSGGAVTVTHKQLTDFHK
QVTSAEECKQVCWAIREFTRLFR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggggaaaccaaacctgactctggtctaccaggcggtccaggccctgtaccac
gacccggacccgtccgggaaggagcgagcctcggtgtggctcggggagctccagagatcg
atgtatgcttgggagatctcagatcagcttctgcagctcaaacaggatgtcgagtcgtgt
tattttgctgctcagacgatgaagatgaagatccagacatctttctacgagcttccaccc
gagacccacaatgcactgcgagaatcgctactgacccacatccagaacctcaaagacctg
tcacccatcatcgtcacacagctggctttagccattgcagatctcgctcttcagatggcc
tcgtggaaaggatgcgttcacacgctcatagaaaagtacaacaatgacatcagctccatg
cccttcctcatagagattctcaccgtgctgccagaggaagttcacagtcggtctctacga
atcggagccaaccggaggacagaaatcatcgaggatctggcttattattccagcactgtt
gtcactttgctgacgtcctgtgtggagaaggcaggaagcgatgagaagatgctcatcaag
gtctttcgctgtttgggtagctggttcaaccttggagtcctcgacagtaacttcatggcc
agtaaccaactgctcatggtcctcttccaagtcctgcagagggatgaaacctccaccaac
ctccacgaggcggcgtcggactgcgtctgctcgtctctctacgccatagagaacgtggag
agcaacatgggtttggctcttcagctcttccagggtgtcctgacgctggagacggcctat
cacatggcggtggctcgagaagacctcgacaaggtgctgaactactgcaggatctttacc
gaactctgcgagacatttttagagacgaccgtcaggagtccaggccagggaatgggagac
ctgaggacacttgagcttctgctgatctgtgcaggacacccgcaatatgaggttgtggag
atctcctttaacttctggtaccgcctcggagaacatctgtataaaataaatgatgcagct
cttcacaacatcttcagaccatacatccagagacttctgcactgtttggcccgacactgt
caactcgatccagaccacgacggaatcccggaggacactgatgattttggggagttcagg
atgagagtctctgaccttgttaaagatgtcatttttcttgttggatccatggagtgtttc
tctcagttatattctacgttaaaagaaggaaacccttcctgggaggtgacggaagctgtt
ctattcatcatggctgcgatcgcgaaaagtgttgatccagaaaacaacccaacgctgtcg
gaggtgttgcagcaggtggttttacttccggaaaccgtccacatggcagttcgttacacg
agcatcgagctggtcggggagatgagcgaggttgtcgacagaaacccaagattccttgac
cctgtgttaaattacctgatgaaaggcctcagagagaaatccctggcgtcggcagctgcg
aaggcaatccacaacatctgctcagtatgcagagatcacatggctcagcacttccagggt
ctgctggacatcgctcgggccctcgactcctttgtcctgtcaactgaggccgctgtagga
ttgcttaaaggtacagctctggtcctggcccgtcttcccctggagaagattgcagaatgt
ctcagtgatctctgtgctgtgcaagttatagcactgaaaaagcttctggctgaagaatct
acaaatggtaagtcagctgatcccaccgtctggctcgacagactggctgttatcttcagg
cacacaaaccccattgtggagaacggacagactcacccctgtcagaaagtcattcaggag
atctggccagtgctgtcggagactctcaatactcatcaggcagacaacaggatcgtggag
cgatgctgtcgctgtctcaggtttgctgtacgatgtgtagggaaaggctccgcctccctg
cttcagccactcgtcactcagatggtaagtgtgtaccaggtgtatccacactcctgtttc
ctatacctgggcagcattctcgtggacgagtatggcatggaggagggttgccggcaaggg
ctgctcgacatgttacaggctctgtgtatgccgactttccagctgttggagcagcagaat
ggtctgaggaatcatcctgacaccgtggatgacctgttcagactggccaccaggtttgtc
cagaggagtcccgtcactttactcagcagcagcatcatcgttcacatcatccagtgcgca
atcgctgccacctcattggatcaccgagatgccaactgcagcgtgatgaagttcgtccga
gacctcgtccacaccggagtcgccaacgatcatgaagaggactttgaggtgaggaagcag
ctgattggtcaggccatggagcagcacggtcagcagctcatcactcagctgatgcactcg
tgttgtttttgcctgcctccatacactctgcccgacgtggccgaggtgctgtgggaggtc
atggtgtttgatagagctacgttctgtcgctggttagaaaatgctctgaaaggtttacca
aaggagacgtcaggaggagccgtgactgtcactcacaaacagctgactgacttccacaaa
caggtcaccagtgctgaggagtgtaaacaggtgtgttgggccatcagagagttcaccaga
ctgttccgatag
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