Gasterosteus aculeatus (three-spined stickleback): 120817173
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Entry
120817173 CDS
T07457
Symbol
cntn1b
Name
(RefSeq) contactin 1b
KO
K06759
contactin 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120817173 (cntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120817173 (cntn1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gat00537
]
120817173 (cntn1b)
Cell adhesion molecules [BR:
gat04515
]
Immunoglobulin superfamily
Contactins
120817173 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gat00537
]
Others
120817173 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Sp38
Motif
Other DBs
NCBI-GeneID:
120817173
NCBI-ProteinID:
XP_040028997
UniProt:
G3Q4Z8
LinkDB
All DBs
Position
IV:27829119..27838651
Genome browser
AA seq
1045 aa
AA seq
DB search
MTDMGCAALLLLALSSSVSLTGAVLFGEPRIFGDDATGYGPIFEEEPVDVVYTEDSPDGR
ISMNCRARANPPASYRWRRDNWEIKLMEQPDEFYSLVGGNLVITNPRQKKHAGTYVCVAR
NIYGTVISKEARVKFGFVEEFPQEERDPVYVKEGQGAVLLCAPPKVWPQEVTYRWIFNEF
PVFLYTDRRRFVSQKTGNLYISKVEAQDAGNYSCFVSSPVTGKSVFSKFIPLIPLPPDDG
EEKKYPADIRVKFPDTTAMLASNITLECFALGNPIPDIVWRKVDATDLPPNHEISESGAV
LHLYNVQYEDVGGYECEAINTKGKDWHKAWLYVESAPEWAETINNTQIDIGSEHTMRCVA
SGKPFPFIRWYKDGYMYGKGELKFSSLTFDDSGMYQCVAENYWGIKYANAELRVIACAPT
FEFSRVKKRLLGAKDGRVVIECKPRAAPRPRYTWTKGKELLYNNSRISIMFDGSLEILNA
TNNDEGVYTCFAENDRGKANSSGYLTITEATGITEPPEDTEAKVGDEVILRCAASYDPML
DITFIWAIDFRVIDFDSEWEHYERVASDDGSGDLRIKNVQIWHEGRYTCLAQTVVDSDTA
YADLKIVGVPGPPGVIRVEEIGDTWVKLLWSKGADHNSPILSHTIQTRHYWALNEDDWRD
ASTSPTFLDGNVEKAEVTDLYPWMEYQFRVIATNEYGSGEASIPSLKIKTWDASPVISPT
DVAGYGGRNGEIVITWTPVLPWFFSGKKFGYIVAFKPHDAYDWWYETISDPETRRYVHKD
SHFIPTDEDFQVREFQVKIKSFNVKGDGPFSLTTVIYYPRDVPIESPTDVYARPVSSTEA
LVWWLPVVDTGTGLQQYIEGYQVKYWRKYDDPEAGANRIFVSAATNQTRLENMLPDSHYL
IEVRALNGAGLGPPGEHCEMFTKRPPPPEPPRMWRYVTWTGQWLYVWWDHIQYDWFGNIS
FPLYYKVMFRKTGYIYGKVYVTGWHFMDFPMPQFGDYELMVRGRYEGGDGPVRKIRIKGE
ASMITPTLSLASLLLLTMCIAGLEI
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgacagacatgggctgcgctgctttactgctcctggccctctcctcttctgtctcccta
actggggcggttctatttggcgagcctagaatttttggagatgatgcgaccggatatggc
cccatctttgaggaggagccggtggacgttgtctacactgaagactcaccagatgggagg
atctcaatgaactgcagggcacgagcaaacccacctgcttcatacaggtggcgccgggat
aactgggagatcaagctgatggagcagccagacgagttctacagccttgttggggggaac
ctggttatcacaaaccccaggcagaagaagcacgccgggacgtacgtctgcgtggccagg
aacatctacggcaccgtcatcagcaaggaggccagggtcaagttcggatttgtggaggag
tttcctcaagaggaaagggacccagtgtacgtcaaagaagggcagggggctgttctgctg
tgcgcacctcctaaagtttggccacaggaggtgacttaccgctggatcttcaacgagttc
ccggttttcctgtacacggatcgccggcgcttcgtctcccagaagacggggaacctgtac
atctccaaagtggaagctcaggatgcgggaaactactcctgcttcgtctccagccccgtc
accgggaaaagtgtcttctcaaagttcatccccctcatccccttaccccccgatgatggt
gaggagaaaaaatacccagcagacatcagggtgaagttcccagatactaccgccatgctg
gcctctaatattacattggagtgctttgctctgggaaacccgatccccgacattgtttgg
aggaaggtcgatgccacggacctgccgccaaaccatgagatcagtgaatccggagctgtg
cttcatctctacaatgtacagtatgaagacgtgggaggatacgagtgtgaagccatcaac
actaaagggaaggactggcacaaggcctggctgtatgtggagtccgctccggagtgggca
gaaaccatcaacaacactcagatcgacatcggctcagagcacaccatgcgctgtgtcgca
tcagggaagcccttccctttcatccgctggtacaaagatggatatatgtatggtaagggc
gagttgaagttttccagtctcaccttcgatgactcgggaatgtaccagtgtgttgctgag
aactactggggaatcaaatacgccaacgccgagctgcgagtcatcgcctgcgctcctaca
ttcgagtttagccgtgtgaagaagcggcttctcggggctaaagatggccgcgtggtgatt
gagtgtaaaccccgagctgctcccaggccgcggtacacgtggacaaagggcaaagagctc
ctctataacaattcacgcatttccatcatgtttgacgggagtctggagatcctcaacgcc
accaacaacgacgagggcgtgtacacctgctttgccgagaatgaccggggaaaggccaac
agctctggctatctcaccatcacggaggctaccggcatcacggaaccacctgaagacacc
gaggcaaaggtcggtgacgaggtgattctgaggtgcgccgcctcatacgaccccatgctg
gacatcacattcatctgggccatagacttcagggtcatcgactttgactctgagtgggaa
cactacgaacgtgttgcgagtgacgatggcagcggtgacctgagaataaagaatgtccag
atttggcacgaaggtcgctacacctgcttggctcagacagtggtggacagcgatactgca
tacgctgacctcaagattgtaggtgttcctggccctcctggtgtgatccgggtggaagag
attggggacacgtgggtgaagcttttgtggtctaaaggagccgatcacaacagccccatt
ctctcccacactattcagaccagacattactgggccctgaatgaagatgactggagggac
gccagcacctctccaacttttctcgacggtaatgtggagaaggcagaggtgaccgatctg
tacccctggatggagtatcagttcagggtcatcgctaccaatgagtacggttctggggag
gccagcatcccctccctcaagattaaaacctgggacgcttctccagtgatttcccccact
gatgtggcgggttatggaggtagaaatggcgagattgtcattacgtggactcccgtgctg
ccctggttcttctccggcaagaagtttggctacattgtggcgttcaagcctcatgacgct
tacgattggtggtacgagaccatttcagacccggagaccaggcgttacgtccacaaggac
tcccacttcattcccaccgatgaagacttccaggtccgagagtttcaggtgaagatcaag
tcatttaatgtgaaaggagacggaccattcagcctcaccacggtcatctactacccgaga
gatgttcctatagagtctccaacagatgtctacgccaggccggtgtcctctaccgaagct
ctagtctggtggctgccggtcgtcgacactggaacgggcctgcagcaatacatcgagggg
taccaggtgaaatactggagaaagtacgatgatccggaggccggagcaaaccgtatattc
gtgtcagccgcaaccaaccagacaaggttggagaacatgctgccggactcccactacctc
atcgaggtccgcgctttaaacggagccggcctcggaccccccggtgaacactgtgagatg
ttcacaaagagaccacccccaccagagcctccccggatgtggcgctatgtcacctggaca
ggccagtggttgtatgtgtggtgggaccacatccagtatgactggtttggcaacatttcc
ttcccactgtattacaaggtcatgttcagaaagaccggttacatctatgggaaagtctac
gtcactggctggcacttcatggacttccccatgcctcagtttggagactatgagctgatg
gtacgcggccgttatgaaggaggggatggcccagtcaggaagatcaggattaagggtgaa
gcctcaatgatcacgccgactctcagcctggcgtctttgctgctgctgacgatgtgcatt
gcgggattggaaatatga
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