Gasterosteus aculeatus (three-spined stickleback): 120817187
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Entry
120817187 CDS
T07457
Name
(RefSeq) collagen alpha-1(VIII) chain-like
KO
K23284
C1q-related factor
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120817187
Membrane trafficking [BR:
gat04131
]
Endocytosis
Phagocytosis
Opsonins
120817187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
BclA_C
TNF
VirD1
CCDC22_N
Motif
Other DBs
NCBI-GeneID:
120817187
NCBI-ProteinID:
XP_040029027
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All DBs
Position
4:31277769..31278676
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AA seq
245 aa
AA seq
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MERLLLLLMSVSGSLGFGNYSHLGAGTSMAVCQPDTCALLSAVAAMGEKMEAVTQTQATL
ELNLGAQMQKMATVEASLQFYKSQAQALEKINQAQDAQLKSLLAVSSLSSTQMAFSAALG
TSIGPFGQDTPVKYQRILSNIGSGYNPATGIFTAMARGMYYFSYTMYNNDGGQPNSVVSL
MMNSQKMVSTWGTVAKDTQDSATNAAVVQLEAGDSVYVQLYANRAVFDDSYYYNTFSGFL
LFTLS
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtttattacttctgttgatgtcggtttccggcagcctgggctttgggaattac
agccacctgggggccgggaccagcatggccgtgtgccagccagacacctgcgcgctgctc
agcgctgtggcagccatgggggagaagatggaagccgtgacgcagacgcaggccacgctg
gagctgaacctgggcgcccagatgcagaagatggccaccgtggaagccagcttgcagttc
tacaagagccaggcccaggccctcgagaagatcaaccaggctcaggacgcgcagctgaag
tccctgctggcagtctcgtctttgagctcgacgcagatggctttctccgccgctctgggc
acctcgatcggtcccttcgggcaggacacgccggtcaagtaccaacggatcctctccaac
atcggcagcggctataacccggccaccggcatcttcaccgccatggcccgggggatgtac
tacttcagctacaccatgtacaacaacgacggcggacagcccaactcggtggtgtccctg
atgatgaacagccagaagatggtgtcgacgtggggcaccgtggccaaggacacccaggac
agcgccaccaacgcggcggtggtgcagctggaggcgggcgacagcgtgtacgtgcagctc
tacgccaacagggcggtcttcgacgacagctattactacaacaccttcagcggcttcctg
ctgttcaccttgtcgtga
DBGET
integrated database retrieval system
