Gasterosteus aculeatus (three-spined stickleback): 120817227
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Entry
120817227 CDS
T07457
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1
KO
K15516
fragile X mental retardation protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120817227 (fmr1)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120817227 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
120817227 (fmr1)
mRNA cycle factors
Stress granule specific factors
120817227 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXMR_C2
KH_1
Agenet
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
120817227
NCBI-ProteinID:
XP_040029124
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Position
IV:complement(16699020..16712039)
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AA seq
619 aa
AA seq
DB search
MDELVVEVRGTSGAFYKAFVKDVHEGSVTVAFENNWQPERQITFQDVRFPPPTGSCKEIN
ESDEVEVYSRANDKEPCGWWLAKVRMVKGEFYVIEYAACDATLNEIVTLERLRPVNPNKP
ASKTTFIKIRLDVPDDLRQMCSKESAHKDFKKAVGAFNVTYDSEKKQLVILSVNEVTTRR
ANMMSDMHFRSLRTKLSLMLRNEEANRQLESSRQLASRFHEQFGVRDDLMGLAIGTHGAN
IQQARKVPGVTNIDLDEETCTFHIYGEDQDAVRAARSFLEFSEDVIKVPRNLVGKVIGKN
GKLIQEVVDKSGVVRVRIEPENEKKPAAVAGADEGLVPFVFVGTKESITNATVLLDYHLN
YLKEVDQLRLERLQIDEQLRQIGGGGGGGAGGGGGTGPRNLKDKTYVFDNGMGLGMGRAG
PGGGKPYGGRGGRGGRGQRGGGAGGGGGGAAFASGTNSEASNASETESDHKDELSDWSLA
PTEELLTGGGTLPRRTDGRRRPGGGGPRGRGARGRGGGGYKGEDMQWSEPRPRHVRDPKT
RAQEDTLQIRVDSNNERSVQHSSGGRGGGGGGPLSAQGGVGAVATGADGPPRHHHQRPIR
DRGMKKDNQDAPPLVNGVS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggatgaactggtcgtggaagtgaggggcacgagcggggccttttataaggcctttgtg
aaggatgttcacgaaggatcggtcactgtggcttttgaaaacaattggcagccggagcga
caaatcacgttccaggatgtgcgcttccctcctccaacgggctcgtgcaaggagatcaac
gagagcgacgaggtggaggtgtactccagggcgaatgacaaggagccatgtgggtggtgg
ctggccaaggttcgcatggtcaaaggagagttttacgttatagagtacgctgcgtgtgac
gccacactgaatgagattgtgacgctggagcggttacggccagtcaaccccaacaaacca
gccagcaaaaccaccttcatcaagatccgactggacgtacccgacgatctacggcagatg
tgctccaaggaatcggctcacaaagacttcaaaaaggccgtgggagcgttcaacgtcacc
tacgactcggagaaaaagcagctcgtcattttgtctgtgaacgaggtcacaacaaggcgg
gccaacatgatgagtgacatgcacttcaggagccttcgcaccaaactgtcgctcatgctg
aggaacgaagaggccaacaggcaactggagagttccaggcagctggcgtcacggtttcac
gaacagtttggcgtccgggacgacctaatgggtctggccatcgggacccacggggcaaac
atccagcaggcccgcaaagtccccggggtcaccaacatagacctggacgaggagacgtgt
acctttcacatatacggagaggaccaggacgccgtgcgcgcagcgaggagtttcctggag
ttctctgaagatgtcatcaaggttccccggaacttagtagggaaggtgatcggcaaaaac
ggcaaactgatccaggaggtggtggataagtctggggtggttcgggttcgcatcgagccg
gagaacgaaaaaaagcctgcagcagtggcgggggcagacgagggattggtgccgtttgtc
tttgtggggaccaaggaaagtatcaccaacgctacagtgctgctggactatcatctcaac
taccttaaggaggtggatcagctgcgcctggagcgtcttcagatcgacgagcagctccgg
cagatcggaggtggaggcgggggaggagcgggaggagggggaggaacggggccgcgaaac
ctcaaagacaaaacctacgtgtttgataacggcatggggctcgggatggggagagcagga
ccaggaggaggaaagccctacggaggaaggggaggaagaggcggcagagggcaaagaggt
ggaggagctggaggaggaggtggaggtgcagctttcgcctcaggcaccaactcggaggcg
tccaacgcctcagagacagagtcggaccacaaagatgagctcagcgactggtcgctggcc
ccgaccgaggagctgctgaccggaggcgggaccctgcccagacggacagacgggaggagg
agaccaggtggcggagggccgaggggccgaggagccagagggagaggagggggagggtac
aaaggggaagacatgcagtggtctgagccgaggcctcgtcatgtcagagaccccaagacg
agagcgcaggaagacactctacagatccgcgtggacagcaacaacgagcgcagcgtgcag
cactcctcaggggggagaggaggcggcgggggagggcctttgtccgcccaaggtggcgtt
ggcgccgtcgccaccggtgccgatggcccgcctcgccaccaccatcagagacccatcaga
gaccgagggatgaagaaggacaaccaggacgctcctccgctggtgaacggagtgtcgtag
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integrated database retrieval system
