KEGG   Gasterosteus aculeatus (three-spined stickleback): 120817229
Entry
120817229         CDS       T07457                                 
Symbol
kdm5a
Name
(RefSeq) lysine-specific demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:gat00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gat01009]
    120817229 (kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gat03036]
    120817229 (kdm5a)
Enzymes [BR:gat01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     120817229 (kdm5a)
Protein phosphatases and associated proteins [BR:gat01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120817229 (kdm5a)
Chromosome and associated proteins [BR:gat03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120817229 (kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_5 Auxin_canalis
Other DBs
NCBI-GeneID: 120817229
NCBI-ProteinID: XP_040029127
LinkDB
Position
IV:complement(26565505..26578882)
AA seq 1770 aa
MSAFAEFVPPPECPVFEPSWEDFSDPLGYINKIRPIAEKTGICKIRPPEDWQPPFACDVR
NFHFTPRVQRLNELEALTRVKLNFLDQIAKFWELQGSKTRFPHVERKVLDLYQLSKIVSS
EGGFESACKEKRWSKVASRMGFPAGKGTGSLLRSHYERILYPYELFQSGATLTGIQRLYD
EGDDEDEVDEGVGEEADEDEEQDEEEEEEEEKDGEGDTMQTKEQLLPERRSRRLKSEREN
KEPKGLKIFGTSPKMVGLEIVSADDGLNKKQRHLKAQAFAIKMRPRKETLEVNFIDLYLC
LVCGRGDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVAEECSKPREAFGFEQ
AVREYSLQSFGEMADHFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSK
EVGSGFPVRDGKRRLLGDEEEYANSGWNLNNTPVLEQSVLTHINVDISGMKVPWLYVGMC
FSSFCWHIEDHWSYSINFLHWGEPKTWYGVPASAAEKLEAVMKKLAPELFDSQPDLLHQL
VTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPMGR
QCVAHYRRLHRYCVFSHEELLCKMAADPESLDVELAAAVVKEMAEMMEEETKLRQAVQEK
GVLSSEQEVFELLPDDERQCHKCKTTCFLSALTCSCSPDRLVCLSHAADLCDCPPGNKCL
RYRYDLEEFPSMLHGVKTRAQSYDTWAKRVTEALAADQKNKKDLIELKVLLEDAEDRKYP
EKALFRRLREMVKEAETCSSVAQLLLSRKQRHSARLRSEISRNRTKLTVDELKAFVDQLY
RLPCIISQARQVKELLENVEDFHERAQVALSDEMPDSSKLQALLDLGSGLDVELPELPRL
KQELQQARWLDEVRVTLAEPHRVTLELMKRLIDSGVGLAPHHAVEKAMAELQEILTVSER
WEDKARACLQARPRHGMATLESIVLEARNIPAYLPNILALREALLKAKDWTSKVEAIQSG
SSYAYLEQLESLLARGRSIPVRLDPLVQVESQVASARAWRDRTGRTFLKKNSTYTLLQVL
SPRVDIGVYGNSKSKRKRVKELMEKERVGFDPDALSDLEESLEEARDPSTVVSAFKSKEQ
KEVEAIHSLRAANLAKMAMADRIEEVKFCLCRKTASGFMLQCDLCKDWFHGACVPLPKTG
TQKKAGGGWQSNSKDSKFLCPLCQRSRRPRLETILSLLVSLQKLPLRLPEGEALQCLTER
AMSWQDRARQSLATEELSSALAKLSVLSQRMVEQAAREKTEKIINAELQKAAANPDLQGH
IQTFQQSGFSRAASPRQSVDYDDEETDSDEDIRETYGYDMKDPGEVKPYLFCDEEIPVKS
EEVVSHMWPVVTPSFCAEHAYSSASKSCVQNMSTPRKQPRKTPLVPRSLEPPVLELSPQA
KAQLEELMMLGDLLEVSLDETQHIWRILQATHPPSEERFLQVMEPDDSLMEKPLKLKLKD
SEKKRKRKLERAEQHHMLMAAAVAAGGAAAMGDMRPAKSKELKRVGLELGLGGKPKKKKL
KLNLDKNREMKQLAKRLVKEEKERKRKEKAASKAEAVREGLEKRKEKKILDIPSKYDWSG
AEDSNDENAVCASKTCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSCEMAENEDYICMDCS
GKAAGGGVAMEDEEEDEEEEEEDEEVVVVAAEEESVVVLSTSMCGVQSLPPPAVVASWSH
VASASHLIPVASPHHHHHHHQQPQEPQQGS
NT seq 5313 nt   +upstreamnt  +downstreamnt
atgtccgcgttcgcggagttcgtgccccctccggaatgcccggtttttgagccgagttgg
gaggatttctcagatcctttaggatacatcaacaagatccgacccattgcagagaaaacg
ggcatctgcaagatccggccgcccgaggactggcagcctccctttgcctgtgatgtgcgc
aacttccacttcacccctcgggtgcagcggctgaacgaacttgaggccctcactcgggtt
aagctcaacttcctggatcaaatcgctaagttctgggagctgcagggatccaagactcga
tttcctcacgtggagagaaaagtgctggacctctatcagctcagcaagatcgtgtcctca
gagggcggctttgagagcgcgtgcaaagagaagaggtggtccaaggtggccagcaggatg
ggcttccccgctgggaaaggcaccggctcactgctgcgctcccactatgagaggatcctt
tatccgtatgaactcttccagtccggtgccacgctgactggcatccagcggctatacgac
gaaggcgacgacgaggacgaggtggatgagggagtcggcgaggaggcggatgaggacgag
gagcaggatgaggaggaggaggaggaggaggaaaaagatggagagggtgacaccatgcag
actaaagagcaacttctgcccgagagacgctccaggcgccttaagtctgagagggaaaac
aaggagccaaaaggcctcaagatctttggtacgagtcccaagatggttggcttggagatc
gtgtcggctgacgacggattgaacaagaagcagcgtcacctcaaagcccaggccttcgcc
atcaaaatgaggccacgcaaggagaccctggaggtcaactttattgacctctacctctgc
ctggtgtgtggacggggcgacgaggaggaccggctcctgctgtgtgacggctgtgacgac
agctaccacaccttctgcctcatcccgcctctgcaggatgtgcccaaaggggactggcgc
tgcccaaagtgtgtcgccgaggagtgcagtaaacccagggaggcgtttggctttgagcag
gcagtgagggaatacagtctgcagagcttcggagaaatggctgaccacttcaagtcggac
tatttcaacatgcccgttcacatggtccccacggagctggtggagaaggagttctggcgc
ctggtcagcagcatcgaggaggatgtcatcgtggagtacggagctgacatcagctctaag
gaagtggggagcggctttcctgtcagggacgggaaaaggaggctgctgggagatgaggag
gagtatgccaactcaggctggaacctgaataacacgccagtgctggagcagtcggtgctc
acccacatcaatgtggacatctcaggtatgaaggtgccctggctctacgtgggcatgtgt
ttctcctcattctgctggcacatcgaggaccactggagttactccatcaacttcctgcac
tggggtgaaccaaagacttggtacggagtgccggcctctgcggcagaaaaactggaggcc
gtcatgaaaaagttggctccagagctgtttgactcccagcctgacctcctccatcaactg
gtcaccatcatgaaccccaatgtcctcatggagcacggagtccccgtgtacaggaccaat
cagtgcgcaggggagtttgtggtcaccttccccagggcctatcacagcggcttcaaccag
ggctacaacttcgcggaggccgttaacttctgcaccgctgactggttgcccatgggtcgt
cagtgcgtggcccattaccgtcgcctccaccgctactgcgtcttctcccacgaggagctg
ctgtgcaagatggccgccgatccagagagtctggacgtggagctggctgccgcagtcgtc
aaggaaatggccgaaatgatggaagaggagaccaaactccgacaggctgtccaggaaaaa
ggggtactgtcgtcggagcaggaagtttttgagcttttgcccgacgacgagcgccagtgt
cacaagtgcaagacgacctgcttcctgtctgctctgacctgttcctgcagccccgaccga
ctggtctgcctgagccacgcggcagacctgtgtgactgcccacctggcaacaagtgtctc
cggtaccgctatgatctggaggagtttccgtccatgctgcatggggtcaagactcgggcg
cagtcttatgacacctgggcaaagagggtcacggaggccttggctgccgatcagaaaaac
aagaaagatcttattgagctcaaggttttgctagaggacgcggaggataggaagtatccc
gagaaagctttgttccgacggctgagggagatggtcaaagaggcggagacgtgctcctct
gtggctcagctgctgctcagccgcaagcaacggcacagcgcccgtctacgttctgaaatc
agtcgtaaccgtaccaagctgacagtggatgagctcaaggccttcgtggatcagctctac
aggctgccctgcatcatcagccaggccagacaagtcaaagagctactggagaatgtggag
gacttccacgagcgagcccaggtggccctgtcggacgagatgccggattcctccaagctg
caggcgctgttggacctgggcagtggcctggacgtggagctgcccgagctgccgcgactg
aagcaggagctccagcaggcccgctggctcgacgaggtgcgcgtcaccctcgccgagccg
caccgcgtcaccctggagctgatgaagaggttgatagactctggggtgggtctggccccc
caccacgccgtggagaaagccatggccgagctgcaggagatcctcaccgtctccgagagg
tgggaggacaaggcccgcgcctgcctgcaggccaggcctcgacacggtatggcgaccttg
gagagcatcgtgctggaagctaggaacattccagcatacctacctaatatcttggccctc
cgagaggccctgctgaaggccaaggactggacatctaaggtggaagccattcagagcggc
agcagctatgcttacctggagcagctggagagcctgctggccagggggcgctccatcccc
gtccggctggacccactggtccaggtggagtctcaggtagcctcggctcgagcctggagg
gacaggaccggtcgcaccttcctcaagaagaactccacgtacacactgctgcaggtcctc
agccctcgcgtggacattggcgtttacggcaacagcaagagcaagaggaaacgcgtcaag
gagctcatggagaaggagcgggtgggctttgaccccgacgccctgagcgacctggaggag
agcctcgaagaggcgcgagacccttccaccgtcgtgtccgccttcaaatccaaagagcaa
aaggaggtggaggccatccactccctccgcgcagccaacttggccaagatggccatggcc
gaccgcatcgaagaggtcaagttctgcctgtgtcgaaagacggccagcggcttcatgctg
cagtgcgacctctgcaaggactggttccacggagcgtgcgtgcctctgcctaagacggga
actcagaagaaggcgggcgggggctggcagagcaacagcaaagactccaaattcctgtgt
ccgctgtgtcagcggtccaggaggccgcggttggagaccatcctgtcgctgctggtctcg
ctgcagaagctgccgttgcgtcttcccgaaggagaagccctccagtgtttgacggagagg
gcgatgagctggcaggaccgagcgcgtcaatctctggccacggaggagctgtcctcggcc
ctggccaagctgtctgtgctgagccagcgcatggtggagcaggcggcgagggagaaaacc
gagaagatcatcaacgccgagctgcagaaggctgccgccaacccggacctgcagggccac
atccagaccttccagcagtccggcttcagcagagccgcatcacctcgccaatccgtggac
tacgatgacgaggagaccgactctgacgaggacataagggagacgtacggttatgacatg
aaggacccgggcgaggtgaagccctacctgttctgtgacgaggagattcccgtgaagtct
gaggaggtggtcagtcacatgtggccggtagtcacgccctccttctgcgccgaacacgcc
tactcctctgcctccaagtcctgtgtgcaaaacatgagcacgcccaggaagcagcccagg
aagacccctctggtgcctcgcagcctggagccaccggtgcttgagctgtccccgcaggct
aaggcccagctggaggaactgatgatgctgggagatctgctggaggtgtccctggacgag
acccagcacatctggaggatcctgcaggccacccaccccccctctgaggagagattcctg
caggtcatggagcctgatgactccctgatggagaagcctctgaagctcaagctcaaagat
tccgagaagaagaggaagcggaagctggagagggccgagcagcaccacatgctaatggcc
gccgccgtcgccgccggcggagcggctgcgatgggcgatatgaggccggccaagtccaaa
gagctgaaaagggtcggcctggagctgggcctcgggggcaaacccaagaagaagaagctc
aagctcaacctcgacaagaaccgggagatgaagcagctggccaagcggctggtcaaggag
gagaaggagaggaagagaaaggagaaggctgcgtccaaggcagaggctgtcagggaaggg
ctggagaagaggaaggagaagaagatcctcgacatcccctccaagtacgactggtccggg
gccgaggactccaacgacgagaacgccgtgtgcgcatccaagacctgccagaggccctgt
aaagataaggtggattgggtgcagtgcgacggcggctgcgacgagtggttccatcaggtg
tgcgtgggcgtgtcgtgcgaaatggccgagaatgaggactacatctgcatggactgctct
ggcaaggctgccggggggggcgtggccatggaggacgaggaggaggacgaggaggaagag
gaggaggacgaggaggtggtggtggtagcggccgaggaggagagcgtcgtcgtgctgtcc
acgtccatgtgcggcgtgcagagtctgccaccgcccgctgtggtggcctcgtggtctcat
gtggcctccgcctctcatctcatcccagtagcttctcctcatcatcatcatcatcatcac
cagcagccgcaggagcctcagcagggaagttag

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