Gasterosteus aculeatus (three-spined stickleback): 120817269
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Entry
120817269 CDS
T07457
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03420
Nucleotide excision repair
gat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120817269 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
120817269 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120817269 (cul4b)
03400 DNA repair and recombination proteins [BR:
gat03400
]
120817269 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gat04147
]
120817269 (cul4b)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
120817269 (cul4b)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
120817269 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
120817269 (cul4b)
Exosome [BR:
gat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120817269 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
120817269
NCBI-ProteinID:
XP_040029227
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Position
IV:6605486..6614261
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AA seq
858 aa
AA seq
DB search
MFPTGLSSPNPPPPPTQEARPLNADVKNDGVSITSPRKRKINGSERDDAAEPISSSPPKT
LNSSSSSSSSSYSPTPLHVHKKLRFEDSADLIGPDVKMSEEAAAAAASCSNNRSKAAGHH
ANGLTKPCGIFSSSKPGAAKKLVIKNFKEKPKLPENYTQETWQKLKEAVEAIQNSTSIKY
NLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQIDQFREDALDSVLFLKKINKCWQD
HCRQMIMVRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGILLLIE
RERSGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYLH
HVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLTHLLDENRIQDLSL
LYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHVINVCFM
KNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDKIMIIFR
FIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELS
KDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQEIFKTFYLGK
HSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTLEEIKLATGIED
SELRRTLQSLACGKARVLHKVPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETVEEQ
ASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKFPVKPADLKKRIESLID
RDYMERDKENPNQYNYVA
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttatcttcccctaatcccccaccaccgccaacccaggaggccaga
cccttgaatgccgatgtcaaaaacgacggcgttagcatcacgtctccgaggaagaggaaa
ataaacggctcagagagggacgacgccgccgagccgatctcctcttcgccccccaagacc
ctgaattcctcctcctcatcctcctcctcctcttattctcccaccccgctgcacgtccac
aagaagttgaggttcgaggattcggcggatctcatcgggccggatgtgaagatgtccgag
gaggccgccgccgccgccgcttcgtgctccaacaaccggagcaaagccgcgggacaccac
gccaacggactgacgaagccctgcggcatcttctccagcagcaagcccggcgccgcgaag
aaactggtcatcaagaacttcaaagaaaagcccaaattgcctgagaactacacgcaggag
acctggcagaagctgaaggaggccgtggaggcgatacagaacagcacctcaatcaagtac
aatctagaagagctctatcaggctgtggagaacctttgctcccataagatatctgccaag
ctttacaaacagctgagggccgtgtgcgaggaccacatcaaggcacaaattgatcaattc
agagaggatgccctggacagtgtgcttttcttaaagaaaattaacaagtgctggcaagat
cactgcagacaaatgatcatggttaggagcatatttctgtttttggaccgcacatatgtt
ttacaaaattcaatgctgccgtcgatctgggacatgggcttggaactgttcaggttctac
atcatcagtgacctgaaggtccagagcaaaaccatcgacggcatcctgctgctcatcgag
cgggagcgaagcggcgaggcgatcgaccgcagcctgctgaggagcctgctgagcatgctc
tctgacctgcagatttatcaggactcctttgagcaacgcttcttggaggaaaccaatcgg
ctgtatgctgcagagggacagaggctgatgcaggagagagaggtaccagaatatctccat
catgtcaacaagcgcttagaggaggaggcagaccgagtcatcacgtatctagaccagagc
acacaaaaaccgctcattgcaacagtggagaagcagcttctgggggaacatctcacagcc
accctgcaaaaaggactgactcacctgctggatgagaacagaattcaggatctgtctctt
ctctatcagctcttcagccgagtgcgcggcggcgtccaggtcctcctgcagcactggata
gagtacataaaggctttcggcagcacgatcgtaatcaacccggaaaaggacaaaacgatg
gtgcaagagctgctggacttcaaggacaaggtggatcacgtcatcaacgtctgcttcatg
aagaacgagaagtttgtcaacgccatgaaggaggctttcgaaacgttcatcaacaagcgg
ccaaataaacccgcagagctgatagcaaaacacgtggattcaaagctaagggcaggaaac
aaagaggcaacagacgaagaactggagaagatgctggataagatcatgataatctttaga
ttcatctatggaaaagatgtttttgaggccttttacaaaaaggatctggccaagaggttg
ctggttggaaaaagcgcctctgtggacgctgaaaaatcgatgttgtcaaagctgaaacac
gaatgtggagcagcgttcaccagcaaactggaggggatgttcaaggacatggaactttct
aaagacattatggtgcagttcaaacagtatatgcagtgccaaaacattcctggaaacatc
gagctgacggtgaacatcctgacgatgggctactggccgacctacgtcccgatggaagta
cacttgcctccggagatggtgcgactgcaggagatcttcaagaccttctacctgggcaaa
cacagcggcaggaagctgcagtggcaatcgacactcggccactgtgtcttaaaagctgaa
tttaaagagggcaagaaggagctgcaggtgtccctcttccaaacactcgtgctgctgatg
tttaacgaaggggaggagttcaccctggaggagatcaaactggccacgggaatagaggac
agcgaactgcgccggactctgcagtcgctggcttgcgggaaagcgcgcgtcctccacaag
gtccccaaaagcaaagacgtggaggacggggacaagttctcgtgcaacgatgacttcaaa
cacaagctcttcaggatcaaaatcaaccagatccagatgaaagaaacggtggaggagcaa
gccagcaccacagagcgggtgtttcaggatcgccagtatcagatcgacgccgccatcgtg
cggatcatgaagatgaggaagactctgagccataatctcttgatgtctgaagtgtacaac
cagctcaaattccctgtcaagcctgctgacttgaagaagaggatagagtctcttattgac
agggactatatggagcgtgacaaggagaaccccaaccagtacaactacgtagcttag
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