Gasterosteus aculeatus (three-spined stickleback): 120817284
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Entry
120817284 CDS
T07457
Symbol
ncam1b
Name
(RefSeq) neural cell adhesion molecule 1b isoform X1
KO
K06491
neural cell adhesion molecule
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
gat04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
120817284 (ncam1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120817284 (ncam1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120817284 (ncam1b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120817284 (ncam1b)
04090 CD molecules [BR:
gat04090
]
120817284 (ncam1b)
00536 Glycosaminoglycan binding proteins [BR:
gat00536
]
120817284 (ncam1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gat00537
]
120817284 (ncam1b)
04091 Lectins [BR:
gat04091
]
120817284 (ncam1b)
Membrane trafficking [BR:
gat04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
120817284 (ncam1b)
Cell adhesion molecules [BR:
gat04515
]
Immunoglobulin superfamily
NCAM1/2
120817284 (ncam1b)
CD molecules [BR:
gat04090
]
Proteins
120817284 (ncam1b)
Glycosaminoglycan binding proteins [BR:
gat00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
120817284 (ncam1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gat00537
]
Others
120817284 (ncam1b)
Lectins [BR:
gat04091
]
I-type lectins (Siglecs)
120817284 (ncam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
V-set_CD47
Pur_ac_phosph_N
C2-set_2
C1-set
Ig_6
C2-set_3
Adeno_E3_CR1
C2-set
Motif
Other DBs
NCBI-GeneID:
120817284
NCBI-ProteinID:
XP_040029259
LinkDB
All DBs
Position
I:11745530..11803004
Genome browser
AA seq
1227 aa
AA seq
DB search
MVQSRDVFLALLLVGCTVSLDVQITPSHGEISVGESKFFMCEAVGVAKHMNWFGPNGDRI
EPNRPDITVTRNDESSSTLTLYKAGEENAGTYKCVATNGDQQAESTVKVKIFQKVTFTNA
PSPQEFNEGDNAILICDVISSPPPTVFWKYKGARIQMEKDVRFKVLPNNHLQIRGIKKTD
EGSYICEGRLMARGEIDLRVIKVVVNVLPTIRVWQSEVNATADVGQSAMLTCAVDGYPEP
MVTWTRNEVVLEAGEKYSFNEDGSEMTLLDVTKLDEGEYTCIARNKAGESEKELSLRVFV
KPKITYIVNQSTSEMEEQVTLTCEASGDPTPTISWSSGEHVFTEGEQAHLNRIYQASWTR
PEQHKSLDGNVVVRSDARVSSLTLKYVKYSDAGQYLCSARSAIGEDDQTAFLEVRYAPKI
HGAVAIYTWEGNAVNISCEVKAHPIDVSIVWLRDGLQLPNSNTTNIKIFRSPSASYLQIT
PESENDFGSYNCTASNEIGTESKEFLLIQAEVPSAPSIGEVRPFSTTAQIQFEEPESTGG
VPVLKYRVEWRAQGWGTWVHQVYEVQDGYTSEATITGLRPETGYELKLSAINGKGESESS
AAEFFKTEPVHGIFNFFTEDTEGNPNPPKLEGALPPKGNSLKVRWIKQDDGGSPILHYLV
RYKPIQVSEWKPEIRLPSGSDYVFLSGLEWDTEYSVYVVAENQKGKSQPATMSFKTSTQP
EAVPDLGEEAAFSMSITLWAGILVVAFVLLLLAVDVSCYFVNKCGLIMCLCGKSGTGTKG
HNVEEGKAAFMKDESKEPIVEVRTEDECTANHNAAGPTEPNETTPLTEPELAAYTAALAL
DSLSSVATNSDTATATIDPAQDSPSSETTTLTCSLSAPADDPSPSPVLAPAPTPESNAAL
ATLLISSSAIEAKMAPLLEQRRSDNPEEPEKLTAPPCSPERTVAQKSGTPIPPKRRHSPK
LAALNAKGSPPVSPLASSPSPTLEGKKRAPRPPGSKLPVQQHAVASGTKTPGQTDATLAT
AAPPKPDSSGRSLTAFDFPNEPAEQTDDNAAKAVAAAAAAAAGSPSAIHVALKAPDAEVS
TPVVARVPSPLPVTYISSSVRVPVSNDPFASASDGNNSRAEGPVGADVVLELTNGTERRS
PPPAALNSLESPPYAPSLPNGDGADLPPSGPVVEASETLAKTAPPVNDESFSDDKGKLQE
ADLSNAVTEISAQRNSVIQTNTTESKA
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggtccagtcaagggatgtttttctagccttgcttctcgtgggctgtacagtttcattg
gatgtgcagatcactccaagtcacggtgagattagtgtcggagagtccaaattcttcatg
tgtgaagctgttggagttgccaagcacatgaactggttcggaccaaatggagacaggata
gaaccgaacagacccgacataacagtaacccgcaacgatgagtcatcctccaccctcact
ctgtacaaagctggggaggaaaacgcaggaacgtacaagtgtgtcgccaccaacggggac
cagcaagcagagtcaactgtcaaagtgaaaatcttccaaaaagtcacctttacgaacgcg
ccctcaccccaagagtttaacgaaggagacaatgccatcctcatctgtgatgtcatcagt
tcgcctccacccactgtcttctggaagtacaaaggagctagaatacaaatggaaaaagat
gttcgctttaaggtattgcccaataaccaccttcaaattcgtggcataaagaagactgat
gagggctcgtatatctgcgagggtcgcctcatggctcgcggcgagattgatctgcgggtc
atcaaggttgtagtgaacgtgctcccgaccatccgggtatggcagtcagaggtgaatgca
acagccgatgtcgggcagtccgccatgttaacgtgtgctgttgatggctatcctgaaccc
atggtgacatggacaagaaacgaagtggttctcgaggcaggagagaagtacagctttaat
gaggacggctcagaaatgacgttgctggatgttaccaagctggatgaaggagaatacacc
tgcattgccaggaacaaagctggggaaagtgagaaggaactcagtctgagagtgtttgtc
aaacctaagatcacctacatcgtaaaccagagcacttcggagatggaggagcaggtaact
ctgacttgcgaggcatcgggagatccaactcccaccatcagctggagctccggtgagcac
gtcttcactgaaggagagcaggcacatctaaacaggatctatcaggcatcatggactcgg
cccgagcaacacaagagcctggatggaaatgtcgtggtgaggagtgacgcccgcgtgtcc
tccctcactctgaagtatgtcaagtactcagacgctggtcagtacctgtgttcagcacgc
agtgccatcggagaggacgatcagacggcatttctggaggtccgctatgcccctaagatt
cacggtgcagtggcaatatatacctgggagggcaacgctgtgaatatcagctgtgaggtc
aaggctcatcccatcgatgtgtctattgtgtggctgagagatggactgcagctccccaac
tcaaacaccaccaacataaagatcttcaggagtccgtcagccagctacttgcagataacc
cccgagtcagaaaacgactttgggagctataactgcactgcttcaaatgagatcggcacg
gagtccaaggagttcctgctcatccaggccgaggtgccgtcggctccatccatcggtgag
gtgagacccttctccaccacggcacagatccagtttgaggaaccggaatccactggaggt
gtgccggtcttgaaataccgagtggagtggagggctcagggctggggcacctgggtgcac
caggtctatgaggtccaagacggctacaccagcgaggcgactataacgggcctgaggccg
gagaccggctacgagctgaagttgtcagccatcaacggcaagggggaaagtgaaagcagc
gctgccgagttcttcaagacagagcctgtccacggcatttttaattttttcactgaagac
acagaagggaatcccaatcctcctaaactcgaaggggctcttccacccaaaggcaactct
ctcaaagtccgctggatcaagcaggatgacggcggctcgcccattctacattatctcgtt
cgctacaagccaatccaggtgtcagagtggaaaccagaaatccggctgcccagcggcagc
gactacgtgtttctcagcggcttggagtgggacaccgagtacagcgtctacgtggtggca
gagaatcagaagggcaagtcccagccagccaccatgtccttcaagacgtccacgcagccc
gaagccgtgccagatttgggggaagaggcagcgttctcaatgagcatcacactctgggcg
gggatccttgttgtagcatttgtactcctgcttctagctgtcgatgtctcctgttatttt
gtcaacaaatgtggcctcatcatgtgcctctgcggtaaatcgggcacagggaccaaaggg
cacaacgtggaggagggaaaagcagccttcatgaaagacgagtccaaggagccaattgtg
gaagtccgaacagaggacgagtgcacggccaatcacaacgcagcaggaccgacggaaccc
aatgaaaccaccccgcttacggagccagagctggcggcttacactgctgctctggcactg
gactccctctcctccgtagccaccaactctgacacggccaccgcaacaattgaccccgct
caggacagcccctctagcgagaccaccaccctcacttgtagtctgtccgccccggccgac
gacccctcgcccagccccgtcctggctccggccccgactccagagtcgaacgcggccctc
gcgactctcctcatctccagctccgccatcgaggctaaaatggccccgttactagagcaa
agaagaagcgacaacccggaagaaccggagaaactaaccgctcctccttgtagccccgaa
cggaccgtagctcagaaatccgggacgccgataccgccgaagcgcaggcactctcctaag
cttgcggccctgaatgctaaaggtagcccgcctgtatcgccactggcctcgtcaccctct
cctacactcgaaggcaagaaacgtgctccgaggccacccggcagcaagcttcccgtgcag
cagcacgctgtagcctcaggcaccaagacgccagggcaaactgacgccactctagcaacc
gctgcccctccgaaaccagactccagtgggaggagcctgactgcctttgacttcccgaat
gaacctgctgagcaaactgacgataacgctgccaaagctgttgctgctgctgctgctgcc
gccgccgggtccccctcagcgatccacgttgctcttaaagccccggatgctgaggtctcc
acccctgtggttgcacgcgtcccctctcctttgcccgtcacttatatttcgtccagtgtg
agggtgccggtttcgaatgatcccttcgcatcggcgtccgacgggaacaactcgcgtgcc
gaggggcccgtaggcgcagatgtagtgttagagctgacaaacgggacagaaagacgctct
ccgcctcccgcggcgctcaatagcttagagagcccgccctatgccccctctctgcccaat
ggagacggagcagacctccccccctctggcccagttgtggaggcgtcagagactctggcc
aagactgctcctcctgtcaacgatgagagtttttccgatgataaaggcaagctgcaggag
gcagacttatcgaacgccgtgacggagatctctgcccaacgcaacagtgtcatacagaca
aataccactgagagcaaagcatga
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integrated database retrieval system
