Gasterosteus aculeatus (three-spined stickleback): 120817316
Help
Entry
120817316 CDS
T07457
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120817316 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gat03400
]
120817316 (apex1)
Enzymes [BR:
gat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
120817316 (apex1)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
120817316 (apex1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
120817316
NCBI-ProteinID:
XP_040029327
LinkDB
All DBs
Position
4:complement(20649287..20652366)
Genome browser
AA seq
310 aa
AA seq
DB search
MKRGKKAEEAATDGENETGSASAKKTKKAKEPEAPILYEDPPDKMTSKDGRNGNVKITSW
NVDGLRAWVKKNGLDWVREENPDVLCLQETKCAEKSLPADITSMPEYPHKYWAASDEKEG
YSGVAMLCKTEPLKVTYGIGKEEHDKEGRVITAEFPNFYLVTAYVPNSGRGLVRLDYRKT
WDVDFRAYLSELDMQKPLVLCGDLNVAHQEIDLKNPKGNKKSAGFTPEEREGISQLLESG
FTDSFRELYPEQANAYTFWTYMMNSRGKNVGWRLDYFLLSSSLLPGLCDSKIRNKALGSD
HCPITLHIAV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggaaagaaggcagaggaggcggccactgacggggagaatgagactggctcc
gcttcagcaaagaaaactaagaaggctaaggaaccagaggccccaatattgtacgaagat
ccgccggacaaaatgacgagcaaagatggccgcaacggcaacgttaaaatcacgtcctgg
aacgtcgacggcctgagggcctgggtgaaaaagaacggcctggattgggtgcgtgaggag
aatccagatgttttgtgcctgcaggagacaaagtgtgcagagaaatccctccccgctgac
attacctcaatgcccgagtaccctcacaagtattgggcggcgtcagatgagaaggagggt
tatagtggtgtggccatgctgtgcaagaccgaacccctaaaagtcacctatggcatcggc
aaagaagagcatgacaaggagggtcgtgtcatcaccgcagagttccccaacttctacctg
gtgaccgcctatgtgccgaactccggaagaggccttgtgcgtctagattaccgcaaaacg
tgggacgtggacttccgggcgtacctgagcgagctggacatgcagaagcccctggtgctg
tgcggcgacctcaacgtcgcacaccaggagatcgacctgaagaacccgaaggggaacaag
aaaagcgctggatttacccccgaggagcgcgagggcatcagccagctgctggagtccggt
ttcaccgacagcttccgcgagctctaccccgagcaggcaaacgcctacaccttctggacc
tacatgatgaactcccggggaaagaacgtgggctggaggcttgattacttcctcttgtcg
tccagcctgctgccaggcctgtgtgacagcaagatccgcaacaaggccctgggaagcgac
cactgccctatcacgctgcacatcgccgtgtag
DBGET
integrated database retrieval system
