Gasterosteus aculeatus (three-spined stickleback): 120817335
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Entry
120817335 CDS
T07457
Symbol
usp6nl
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120817335 (usp6nl)
Membrane trafficking [BR:
gat04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120817335 (usp6nl)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
120817335
NCBI-ProteinID:
XP_040029372
UniProt:
A0AAQ4QQ36
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Position
IV:33097287..33123406
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AA seq
887 aa
AA seq
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MQVLQIVKELVSPSRRRAAARFGASDQEAAVKLDQERAEIVAKYDKGKEATVEPWEDTNY
HLYKVVDRFGFVQKNDLPSYDSVEEKQKHVEVERTSKWLKMLKSWDKYKNSEKLVRRVYK
GIPLQLRGEVWCLLLDVPKIKEEKKDFYEKLKARARGVSPDIRQIDLDVNRTYRDHVMFM
HRYDVKQQALFHVLTAYSMYNTEVGYCQGMSQITALLLIYMNEEDAFWALVKLLSGPKHA
MHGFFIPGFPKLMRFQEHHDRLLRKMMPKLKQHLDNQEVLTSLYTMKWFFQCFLDRTPFT
LTLRIWDIYILEGERVLPTMSYTILKLHKKHLMKLSMEELVEFLQVTLSKNFFFEDDFVV
EQLQASMAELRRAKLELPVAGKDDELPKKPLGQLPPERVAANHVANGQSHAEPAEPPRDP
SPRPERQRGSRPPSRSRRDSLDKSIRHHKVDKRDVRSRGSGEIPDEQRKQSAAATPERAA
TSPLAPTPTPQLIVGDRPKPQSHAAAASSSRREITPRWFKPSETRLEAVKAAGRDVQLSR
AASPAPSSPEDGALPNSRPPSKGFVADSNRGSNASQYDNVPGVPEPEFEILELDGPPARM
RPPRGEPPFGASSLHQGSPALDGSVAYAASGPRVANQQPLPPAFSHNSPGGVHASFQGSQ
SRYNTPPQQHSPGRATTEVPILHPAYSVSLDHRGEERLYAPPPRFTPPSSAVYGERAYAT
TQRRSHSPQKALANNSYATYRRQPLLPSSDRNARPPPEHPLMADPRGRPAPIYLQQPAYA
PADYAFEAHQRGEALPHYLPDSGSRRSAWAPEEAAAPPLLSPGGVPRSPSFQQAQMSPVP
EFSFPPNPDDLLGYRTQFQKQQLPPLFGGPHYRHAQQAFAMQESMLL
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcctacagatcgtcaaggagctggtgtcgccttccagacgcagggcagccgcc
aggttcggagcgtctgatcaggaggcggcggtgaagctcgaccaggaacgggcggagatc
gtcgccaaatatgacaagggcaaagaggccaccgtggagccctgggaggacaccaactat
cacctgtacaaggtcgtggaccgcttcggcttcgtccagaagaacgacctcccgtcctac
gactcggtggaggagaagcaaaagcacgtggaggtggagaggacctccaagtggctgaag
atgctgaagagctgggacaagtacaagaacagcgaaaagctggtccggcgcgtctacaag
ggaattccgctgcagctccgcggggaggtgtggtgtctgctgctcgacgttcccaaaata
aaggaggaaaagaaagacttctacgagaaactgaaggcccgggccaggggcgtctccccc
gacatccgtcagatcgacttggatgtgaaccgcacctacagagaccacgtgatgttcatg
caccgctacgacgtcaagcagcaggcgctgttccacgtcctcacagcctactccatgtac
aacacggaggtgggctactgccagggcatgagtcagatcacggctctgctgctcatctac
atgaacgaggaggacgccttctgggctctggtcaagctgctgtctgggccgaagcacgcc
atgcacggcttcttcatccccggcttcccaaagctgatgcgcttccaggagcaccacgac
cgcctcctcaggaagatgatgcccaaactgaagcagcacctggacaaccaggaggtgtta
accagcctctacaccatgaagtggttcttccagtgcttcctggacagaactcccttcact
ctcaccctcaggatctgggacatctacatcctggagggggagcgagtgctgcccaccatg
tcctacaccatcctcaagctgcacaagaagcacctgatgaagctctccatggaggagctg
gtggagtttctgcaggtgacgttgtccaaaaacttcttcttcgaggacgactttgtggtg
gagcagctgcaggcgtccatggcggagctgaggagggcgaagctggagctgcccgtagca
ggtaaagacgacgagcttcccaagaagcccctcgggcagcttcctcccgagcgggtggcg
gcgaaccacgtggccaacggtcagagccacgccgagccggccgagcctcccagggacccg
agtcccagaccggagcgccagcgggggagtcgcccccccagccggtcacgccgggactcg
ctggataaatcgatccgtcaccacaaggtcgacaagagggacgtgcgctcccgagggtcc
ggggagatccccgacgagcagaggaagcagtccgccgccgccacgcctgagagggcggca
acgtcacccttggcccccacccctaccccacagctcatcgtgggcgataggccgaagcct
cagagccacgccgccgcggcctccagctcccgcagagaaatcaccccccggtggttcaag
ccctccgagaccaggctggaagcggtcaaggcggcgggccgggatgtccagctgagcaga
gcggcgtcaccggccccctccagcccagaggacggcgcgctgccaaacagccggcccccc
tccaagggctttgttgccgactccaaccgcggctccaacgcctcccagtacgacaacgtc
cccggcgtgccggagcccgagtttgagatcctggagctcgacggacctccggccagaatg
aggccccctcgcggcgagccgcccttcggcgcgtcgtccctccatcagggaagccccgcc
ctggacgggagcgtcgcctatgcggcgtcggggcccagggtggcaaaccaacagccgctt
cctcctgcgttttcccacaacagtccagggggggtccacgccagcttccagggcagccag
agccggtacaacacccctccccagcagcactccccgggccgggccaccaccgaagtcccc
atcttgcatcccgcttacagcgtcagcctggaccacagaggagaggaaagactctatgcc
ccgccccctcggttcacccccccctccagcgcggtgtacggggagcgggcgtacgccacc
acacagcgccggagccactccccgcagaaggcgctcgcaaacaactcctacgccacctac
cgcaggcagccgctgttgccgagctccgaccgaaacgccaggccccccccggagcacccg
ctgatggcggacccccgggggaggcccgcccccatctacctgcagcagccggcctacgct
ccggcggactacgcgttcgaggcgcatcagaggggcgaggccctcccgcactacctgcca
gacagcgggtcccggcggtccgcgtgggcgccggaggaggcggcggcgccgccccttctg
tccccgggcggggtgccgcgctcgcccagcttccagcaagcccagatgtctccggtccca
gagttctccttccccccgaacccggacgacctgctcggctacaggactcagttccagaag
caacagctccccccgctgttcggaggaccacactacaggcacgcgcagcaggcgttcgcc
atgcaggagtccatgctgctgtga
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