Gasterosteus aculeatus (three-spined stickleback): 120817383
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Entry
120817383 CDS
T07457
Symbol
csf1ra
Name
(RefSeq) LOW QUALITY PROTEIN: macrophage colony-stimulating factor 1 receptor
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04010
MAPK signaling pathway
gat04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120817383 (csf1ra)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120817383 (csf1ra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gat01001
]
120817383 (csf1ra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gat04090
]
120817383 (csf1ra)
Enzymes [BR:
gat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120817383 (csf1ra)
Protein kinases [BR:
gat01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
120817383 (csf1ra)
CD molecules [BR:
gat04090
]
Proteins
120817383 (csf1ra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
Ig_VEGFR-1-like_5th
C2-set_2
Motif
Other DBs
NCBI-GeneID:
120817383
NCBI-ProteinID:
XP_040029484
LinkDB
All DBs
Position
IV:10909519..10919047
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AA seq
977 aa
AA seq
DB search
MQSCLALLLGIVASAASAEWRRPVIKCNSKVASSELVVXQHGTPLDLRCERDAPVNWYTR
LAKHRRFVSRGNGKVRSFRVERPSAEFTGTYKCAYTAGPQHPSASVHVYVKDPNRAFWTS
STSLRVVKKEGEDYLLPCLLTNPAATELGLRMDNGTSVPPGMNFTVNRHRGIFIHKLHPG
FNADYVCTARVNGVEMISKVFSVYVIQKLRFPPYVLLETDEYVRIVGEELKIFCTTHNPN
FNYNVTWKYTTKSRPTIEERVRSSGENRLDIQSILTIPAVDLKDTGNISCHGTNEAGVNS
STTYLLVVDKAYIRLLPQLSPKLAHQGLSVEVNEGEDLELTVIIEAYPHITEHRWQTPTS
PNTSTQEHKLIKYNNRYHATLQLKRMNAQEQGIYTFYARSDLTNASITFQVQMYQRPVAV
VRWENITTLTCTSFGYPAPRIIWYQCFGIRPSCNENTSGLQLAIPLQAPTVEVQREEYGA
VEVESVLTVGPSSRRMTVECVAFNLVGVSSDTFAMEVSDKLFTSTLTGAAGILAILLVLL
VFLLYKYKQKPRYEIRWQIIEARDGNHYTFIDPTQLPYNEKWEFPRDKLKLGKILGAGAF
GKVVEATAYGLGMEDNALRVAVKMLKASAHSDEREALMSELKILSHLGHHRNIVNLLGAC
TYGGPVLVITEYCSLGDLLNFLRHKAETFENFILSVPDITERSNDYKNVCSERQFIRSDS
GISSTSSSSYLEMRPSQVPNMESSPDSMCEETGEWPLDIDDLLRFSFQVAQGLDFLAAKN
CIHRDVAARNVLLTDRRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYT
IQSDVWSYGILLWEIFSLGKSPYPCVAVDSRFYKMVKRGYQMCQPNFAPAEIYTIMKICW
NLEPTERPTFSKISQMIERLLGEQPEQEQLIYQNVQQQVTECEVSDALKHCDGPRDPSCD
RQEEGQPLMKTNNYQFC
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctgcctggctctgctgctggggatcgtggcctctgctgcttcagcggaatgg
aggcgtccggtgatcaagtgcaactctaaagtcgcgagttctgagttggtggtcnnccag
catgggacccccttggatctgaggtgtgagagagatgcgcctgtgaactggtatacgagg
ttggccaaacacagacgcttcgtgtccaggggcaacgggaaagtccgctcctttagggtg
gaacgtccctctgcggaatttactggaacatacaagtgtgcttacaccgctgggccacag
catcccagcgcctcggtgcacgtgtacgtcaaagatccaaaccgtgcgttctggaccagc
agcacgtccctacgggtggtgaagaaggagggagaggactacctgctgccctgcttgctg
accaacccggcagcgacagaactgggcctccgcatggacaacggcacttcagtgccacca
ggcatgaactttacagtgaaccggcaccgtgggattttcatccacaagctccacccgggc
ttcaatgccgactacgtctgcacagccagggttaacggagtggagatgatctccaaggtc
ttttccgtctacgtcattcagaaactccgtttccctccatacgtactcttggagacggat
gaatatgtgcgcattgttggggaggaactcaagattttctgcacaacacacaaccccaac
ttcaactacaatgtcacctggaaatacaccaccaagtcgagaccaactatagaggagagg
gtgcgctccagtggagaaaatcgcttggatatacagagcatactgaccatccccgccgtg
gaccttaaagacacgggaaacatttcctgccacggcacgaatgaagcaggcgtgaacagc
tcaacgacatacctgctggttgtagacaaagcctacatacggctgttgccacagctgtct
cctaaactagcccaccagggactttcagtggaggtgaacgagggagaagacctggagctg
accgtgatcatcgaagcgtacccccacattacagagcacagatggcaaaccccaacttct
cccaacacgtccacacaggagcacaagctcatcaaatacaacaacagataccacgctacg
ctgcagctaaagagaatgaatgcacaggagcagggaatatacaccttctacgccaggagc
gacttgaccaatgcatccatcacattccaagtccaaatgtatcagagaccagttgctgtg
gtgagatgggaaaacataaccactctcacttgcacttcatttggctatcctgcccccaga
atcatctggtaccaatgttttgggatacggccttcatgcaacgaaaacacctcagggctg
cagctggcaatccccctgcaggctcccacagtggaggtccagcgggaggagtacggggcc
gtggaggtggagagcgtcctcaccgtcgggccctccagccggaggatgacggtcgagtgt
gttgccttcaacctcgtcggcgtcagcagcgacacttttgccatggaggtttctgacaaa
ctgttcacttccaccttgactggagcagcaggcattctggccatcctgcttgtgctactg
gtttttctgttgtacaaatataagcagaaacccaggtatgagatccgatggcagatcatt
gaggcgagagatggaaaccactacacctttatcgaccccactcagctcccttataatgag
aagtgggagttcccaagagacaagctcaagctagggaagatcctgggtgcaggagctttt
ggaaaggtcgttgaggccacagcctacggccttggaatggaagacaatgcgttgcgtgta
gctgtgaaaatgttaaaagccagcgcgcattcagatgaaagggaggctctgatgtcggag
ctgaagatcctgagccacctgggtcaccacaggaacatcgtcaatctcctgggagcatgc
acttatggaggcccagtgcttgtgatcacggagtactgcagcctcggcgacctcctgaac
ttccttcgtcacaaggcagagacgtttgagaactttattctgagcgtccctgacattacg
gagcgctctaatgactacaagaacgtctgcagcgagagacagttcatcagaagtgacagt
gggatctccagtacatcttcaagcagttacctagagatgagacccagccaggttcccaat
atggaatcatctccagactctatgtgtgaggagacaggtgaatggcccctggacattgat
gacttgctgaggttttcctttcaagtggctcagggcctcgacttcttggctgccaaaaac
tgtattcatagagacgtggctgctaggaatgtcctcttgaccgaccgcagagtggccaag
atttgtgactttggtctggcccgtgacatcatgaatgactccaactacgtggtgaagggc
aacgcccgtctgccagtgaagtggatggctccagagagcatcttcgactgcgtgtacacc
atccagagtgacgtctggtcctacggcatcctcttgtgggagatcttctctttaggcaag
agcccttacccctgcgtggctgtggactctaggttctacaagatggtgaagcgcgggtac
cagatgtgccaaccgaactttgccccagccgagatctacacgatcatgaagatctgctgg
aatctggagcccacggagcgcccgacttttagcaagatcagtcagatgatagaaagacta
ctcggggaacaacctgagcaggaacagctaatctaccagaatgtgcagcagcaggtcaca
gagtgtgaagtgagcgacgcgctcaagcactgcgacggcccccgtgacccgtcttgtgac
cgccaggaagaggggcagcctctgatgaagaccaataactaccagttttgttga
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