Gasterosteus aculeatus (three-spined stickleback): 120817496
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Entry
120817496 CDS
T07457
Name
(RefSeq) sorting nexin-4-like
KO
K17919
sorting nexin-4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120817496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120817496
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120817496
Membrane trafficking [BR:
gat04131
]
SNARE
SNARE associated proteins
Others
120817496
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
120817496
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
120817496
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120817496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
DUF6415
Motif
Other DBs
NCBI-GeneID:
120817496
NCBI-ProteinID:
XP_040029716
LinkDB
All DBs
Position
IV:complement(21530148..21537801)
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AA seq
410 aa
AA seq
DB search
MLCDVTAPVADEASALMEICVAEAEKRNGRNTVNMQETFTVYLVETRPMDAVAEGRNPAP
DSLWRRYSEFELLRNYLLVTYPYIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLEN
FLLRVASHPVLSNDKILHHFLTEEHGWKEVVYETGFQAKADSRLRALSATFRVRNPDKRF
MEMKHYSDELQSHTSQLLRARVRVADRLYGVYKVHGNYGRVFSEWSAVEKEMGDGLQSAG
HHMDAFAASIDDILEEEEHYADQLKEYLFYAEALRAVCRKHELTQFELEMASQDLVSKKQ
QHEEIATGIVRTFSFKGMTNKLFGQEAPEQREARLKLLEELIAEGEETVKEKTVECEEHV
DRAWVDMQRFKEQKDKDLREALINYAVMQISMCKKGTQMWSNAKDCFLKM
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtgacgtcacggctccggtggcggacgaggcctccgcgctgatggagatctgt
gtcgctgaggcggagaagaggaacggcaggaacacggtgaacatgcaggagacgttcacc
gtgtacctcgtcgagacacggccgatggatgcagttgccgaaggccgcaatccggcgccg
gactccctgtggaggagatacagtgaatttgaactgctgcggaactacctgttggtcact
tatccgtacatcgtggtgcctcctctgcccgagaagagggcagagtttgtgtggcacaag
ctgtcggctgacaacatggacccggactttgtggagcgccggcggatcgggctggagaac
ttcctgcttcgtgtggcatcacacccagtcctctccaatgacaagattctccaccacttc
ctcactgaggaacacggctggaaggaagtggtgtatgagacgggattccaggccaaggcc
gattccaggctgagagctctcagtgccaccttcagggtgaggaatccagataagcgcttc
atggagatgaaacattacagcgacgagctgcagtctcacacgtctcagctgctccgagca
cgagtaagggtggcagatcgtctctatggtgtttacaaggtccacggcaactacgggaga
gtcttcagcgagtggagcgccgtggagaaggagatgggagatgggctgcaaagtgccggt
catcacatggatgcatttgcagcctcaattgatgatattttagaggaggaggaacattat
gcagaccaactgaaagaatatctattctatgctgaagctctgagggcagtgtgcaggaaa
cacgagctgacccagtttgagcttgagatggcctcccaagacctggtctccaagaagcag
cagcacgaggagatagccacggggattgtacggacgttctccttcaaaggcatgaccaac
aagctctttggccaggaggcccccgagcagagggaggcccggctgaagctgctggaggag
ctgatcgcggagggcgaagagaccgtcaaggagaagacggtcgagtgcgaagagcatgtt
gacagggcctgggtggacatgcagcgcttcaaggagcagaaagacaaagacctgcgagaa
gcgctcatcaattatgctgtcatgcaaatcagcatgtgcaaaaagggaacacaaatgtgg
agcaacgccaaagactgtttcctcaagatgtaa
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