Gasterosteus aculeatus (three-spined stickleback): 120817535
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Entry
120817535 CDS
T07457
Symbol
pdlim7
Name
(RefSeq) PDZ and LIM domain protein 7 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120817535 (pdlim7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120817535 (pdlim7)
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120817535 (pdlim7)
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
120817535
NCBI-ProteinID:
XP_040029803
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Position
IV:complement(13204164..13230829)
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AA seq
432 aa
AA seq
DB search
MLGEDSERPEAMSVYSVTLSGPAPWGFRLQGGKDFSMPLTVSRLSPGGKAAQAGVGVGDW
VVSISDTNAEDMTHVEAQNKIRAATDSLTLTLSKAFKAGGDGKDSLVPASVQPKYSFAPS
SAINKMARPFTAGGGSANSGPAIKPVAYSPKLNTTSSQGCASMQQPRNGLEPTRSPAKAQ
AADKPAGSKTAAASSGPSSRPPWVTDPNFANRFRPDKTSTVVTQHQQPAQPTPMQNRSSI
LQAAQHAPDDGGSTPLCGACNKIIRGRYLVALGRSWHPEEFTCSQCKVVLDEGGFFEEKG
SVYCAKCHDSRYAPNCAKCKKKITGEIMHALKMTYHVECFKCAACKTAIRNQAFYMEEGE
PYCEKDYEKMFGTKCHGCDFKIDAGDRFLEALGYSWHDTCFVCALCQINLEGKTFYSKKD
KPLCKGHAFAPV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgttgggcgaagacagcgagcgaccagaggctatgagcgtgtactctgtaaccctcagc
ggcccggcgccttggggcttcaggctgcagggcggcaaggacttcagcatgccgctcacc
gtatcgaggctgtccccgggcggcaaggcagctcaggctggtgtcggggtaggagactgg
gtggtgtccatcagcgacactaatgcagaagacatgacccatgtggaagcgcagaacaag
atcagagcagcaacagactcgctcaccctcaccctcagcaaagctttcaaagcgggagga
gacgggaaggactcactcgtgccggcttctgtgcagccaaagtactcctttgccccgagc
tcggccattaacaagatggcgaggccgtttacggcaggtggtggtagtgccaactcagga
cctgctatcaaacctgtggcatactcccctaaacttaacaccacgagctcacagggttgt
gccagcatgcagcagccacggaatggccttgagccaactcgctcacctgccaaggcccag
gcagcagataaaccagctggctccaagactgcagctgccagttcaggcccttcctcacga
ccgccgtgggtcactgatcctaattttgccaaccgctttcgccccgacaagacgagcacg
gtcgtgactcagcaccagcagccggcccagccgacgccgatgcagaaccgcagctccatc
ttgcaggccgcgcagcatgcgcccgacgacggcgggagtactccgctgtgtggcgcctgc
aacaaaatcatccgcggtcggtatctggtggcgctgggacgttcttggcacccggaggag
ttcacatgttcacagtgtaaagtggtcctggacgaggggggcttctttgaggagaaaggg
tccgtctattgtgcaaagtgccacgatagccgatacgctcccaactgcgccaagtgcaaa
aagaagatcacaggggaaatcatgcatgccctgaagatgacctaccatgttgagtgtttc
aagtgtgcagcctgcaagactgcaatcaggaaccaagccttttacatggaggagggagaa
ccctactgtgagaaagactacgagaagatgttcggcaccaaatgccatggctgtgacttt
aagattgatgccggggatcggtttctggaggccttgggctacagctggcatgatacgtgc
ttcgtctgtgctctctgtcaaatcaacctggaggggaagacgttctactcgaagaaggat
aagcccctgtgcaaaggccatgccttcgctccagtgtga
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