Gasterosteus aculeatus (three-spined stickleback): 120817646
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Entry
120817646 CDS
T07457
Symbol
aff2
Name
(RefSeq) AF4/FMR2 family member 2
KO
K15194
AF4/FMR2 family member 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120817646 (aff2)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120817646 (aff2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
120817646
NCBI-ProteinID:
XP_040030000
UniProt:
G3Q4H8
LinkDB
All DBs
Position
IV:complement(16570205..16691246)
Genome browser
AA seq
1519 aa
AA seq
DB search
MDLFEFDFFRDWELEQPCHLESDRSALKRREWERRNQEVQQDEDLFSTGFNLFGEPYKTN
KGDALASRVQNTLGSYEEMKDLLTSHSNQSHLVGIPKGSNNLQTPTPSAAERPATECQLF
NEDLRGGAAGGRGPEGGGDKRTANPSSSSSTSMQPPATAASAPCTTGIPHQNSKKSSVDW
SRAGHGPGAQGGSVVHGQITPAASGRGKMSLLEEQQMQRHDELFISLKDELGLKGDSSPS
SSTSSSSSLSSSGRKHSSHPSKSLPLPDGGNLRSSAMDGGHFKSSTNTENCGHFKSSPYE
NEAGSHFSTSSSPLASTSVLTTPTPGLTTPTSGLTTPTFPPGSLSGKPIAIQQKPTAYVR
PMDGQDQVPSDSPQLKPPLAATEGFNNSQAYGGNTGNAKNKLPKLSLSHTGEVSLPNDSS
CVEEILREMTHSWPPPLTAIHTPGKADQTKFPIPNKESQHGTSGYNTQKRCSISGNKPAA
KPPTAPQKSMLEDDLEISSDEEEAEQQVSDKPKPRVTAQSGASGSSSESESSSESDTDES
ESSSSDSEYNRTSRTHTPEPEPPSANKWQLDSWLNKVQAQTKPLLPPQPEHGSGTTTQGP
RTFSPRSEADGVGAAAKTKPCVSSSAPPPAAQPLEHKDARGALCPGREKAKAKLSQKASG
EGQRSKTRMSPGVLSGPEVTTQRRSTTGKKQPRRTERSNSAEDSQSQTWSRSTQQSPVAR
EKDLLPPPSLELQTPPRPRNKPPGGKTAPRKEPRCATNSNNSSVTPPAALQQTPVPLPAA
SVNQDKRKHRGPSTKITPKSREFIETDSSSSSSECHSDSEEALKIPALPPQAISTPPLPP
CLGPAGSLGTFGGKGLRLKEAGAVTTNGSSSSSIAGSANGGSCNTLSIGTITGSFGTSVP
DPGGSGGQRKDPASVSPPLKVGHEVPRSPLKEYQELQGLWVKIELGLLSRVPGPGTGEGS
RAGLAEKDRGEGRDRERQGERTAAAERERQKQAEREWPGLRERPKPKEGEDTERLVQDRE
RQADRDRLPEREKPTDRGGQGPTGTRGEGADDGEGQGEVLDNPLVQEQSNPRLAGRTESK
HRKQAAGNTAPPSEKHANKSKRKHKSDHSELSVNGNKKLRLDKDCQLLPPSISPVLNHKN
SLTDSLIRKPSRRREDQLLPPLLSPLSDDPPRKRTYDASSSLGLEGVTSLTSLCSASSST
STSSSSSSHRHRRGEGKASSHSRAASEVNTHVEKPSGDGYHANGQADSEVWSEPLMDPGE
PRRPRLTFSNTVHCADYYMQEAKRLKHKADALMDKFGKAVNYADGALSFIECGNAMERDP
LEAKSPYTMYSETVELIRYAMRLKNFTSHSATVAEKKLAVLCNRCLSLLYLRMFHLKKDH
AVKYSRSLMEYFKNSAKSSHQEPSPWRINGKVNGTPSPLSLSPSPAGSGGSGGAPGSSGS
VAIPQRIHHMAASHVNITNNILRSYEHWETADRLAPDSQEFFLELDSVMEPLGQQSSMTE
LVRYIRQGLHWLRLEAHLL
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atggatctcttcgaatttgactttttcagagactgggagctggagcagccatgtcatctg
gagtcggatcgcagcgccctgaagaggagggagtgggagaggaggaaccaggaggtccaa
caggatgaagacctgttctcaaccggattcaacctgttcggcgaaccttacaaaactaat
aaaggtgacgcgctggccagtcgcgtccagaacacgctgggttcctacgaggaaatgaag
gacctgttaaccagccactctaaccagagccacttggtgggaatccccaaaggcagcaac
aacctgcagacgccaaccccgtctgcggcggagaggcctgccacggagtgccagcttttc
aacgaggacctgagaggaggagcagcaggaggacgggggccagagggaggcggcgacaag
aggacggcaaacccatcttcctcatcttcaacttctatgcagccgcccgccacggccgcg
tcggcgccctgcaccacggggatcccccatcagaactctaaaaagagctccgtggactgg
tctagggctggccatggcccgggcgcccagggaggaagcgtggttcacgggcaaatcacg
ccggccgcaagtggaagagggaaaatgtctctgctggaggagcagcaaatgcaacggcac
gacgagctgttcatttcactcaaagatgaacttggtctcaaaggcgactcaagtccttct
tcctccacttcgtcctcctcttccttatcttcctctgggagaaagcactcttcacaccca
tcaaaaagcctccctcttccagacggtggcaatttgcgatcgtccgccatggacgggggc
cattttaagtcttccactaacacggaaaactgtggacattttaaatcctcaccgtatgaa
aacgaggccggctcccacttctcgacatcctcttccccgctggcttccacgtcggttctg
accacgcccacccctggtctaaccactcccacgtctgggctgaccacccccaccttccca
cccggcagcctgtcgggtaagccaatcgccatacagcagaagccgacggcgtacgtccgc
ccaatggatggccaggaccaggtgccgagtgactcgccacagcttaagccccccctggcg
gccacggagggattcaacaacagtcaggcctacggagggaatactgggaacgccaagaac
aaactacccaaactgagtctgagccacacaggggaggtcagcctaccaaatgactccagc
tgtgttgaagagattttgcgggagatgacccattcctggcctcctcccctcacagcgata
cacacacccgggaaggccgaccagaccaagttccccatcccgaacaaggagtcacagcat
gggacttcaggctacaatacccagaagcgatgttctatatcgggtaacaagcctgctgcg
aaaccaccgaccgcaccacagaagtcgatgttggaggatgacctggagatcagcagcgac
gaggaagaggccgagcagcaggtgtctgacaagcccaagcccagagtcacagcccaaagt
ggagcatcggggagcagcagtgaatccgagagcagctccgagtcggacacggacgaatca
gagagcagctccagtgacagcgagtataaccggacctcccgcacgcacaccccagagcct
gagcccccctcggccaacaagtggcagctggacagctggttgaataaagtccaagctcag
accaaacccttgcttccccctcagccggaacatggctcaggcaccaccacccagggcccg
aggaccttctctccgaggagtgaagcagacggagtgggagcggctgccaagactaagccc
tgcgtgtccagcagcgcccctcctccagctgcccaaccgctggaacacaaggacgcaaga
ggagctctctgcccgggcagagagaaggccaaggccaagctcagccagaaggcctccggg
gaggggcagaggtcaaagacgaggatgtcaccgggggtgttgtccgggccggaggtcacg
acccagaggaggagcaccacggggaagaagcagccccgacggacggagaggtcaaacagc
gcggaggactctcagagccagacgtggagcagaagcacccagcagagtcctgtggctagg
gagaaggacctgttgcctcccccctccctggagcttcagacccccccgaggccaagaaac
aaacccccgggtgggaaaactgcccccagaaaggaacctcgctgtgccaccaactcaaac
aacagctcggttacaccaccagcagcgctgcaacaaaccccggtgccactgccagctgcc
agcgtaaaccaggacaagaggaaacaccgaggtccgagcaccaaaatcacacccaagtcc
cgtgaattcatcgaaacggactcctcctcctcgtcctccgaatgccactcggattcagag
gaagccctcaagatccccgcgctgccgccacaggccatcagcacgcctcctctgccccca
tgcctcgggcccgcagggagcctggggactttcggagggaagggtctccgactcaaagag
gccggtgccgtgaccaccaacggtagcagcagcagcagcatcgccggcagtgctaacggc
ggcagctgtaacaccctgagcattggcaccataaccggttcattcggcacctctgtgccc
gatcccggagggtcgggaggtcagcgcaaagacccggcgtctgtgtcgccgcccctcaaa
gtcggacacgaggtgccccggtcacccttgaaggaataccaagagctccagggtttgtgg
gtgaaaatcgagctgggtttgctgagcagggtgcccggcccgggtacgggggaaggatcc
agagcaggtctggcagaaaaggacaggggcgaggggagggacagggaaagacagggggag
aggacagcggcggccgagagggagagacagaagcaggccgagagagagtggcccgggctg
agagagaggccgaagccgaaagagggagaggacaccgagcgactggtgcaggacagggag
aggcaggcggacagggacagattaccggagagggagaagccgacggacaggggaggacag
ggaccaactgggacccggggagagggagcggacgacggggagggacagggagaggttctg
gacaacccccttgtgcaagagcagagcaatccccggctggcagggaggacggagagcaaa
caccggaagcaggccgccggaaacacggcgcccccatcggagaaacacgccaacaagagc
aagaggaaacacaagtcagaccacagcgagttgtcagtcaacggcaataagaagctgcga
ttggacaaagactgccagctgctcccgccctccatctctcccgtactcaaccacaagaac
agcctgacagactcgctaatcaggaagccgtctcggcgacgtgaagaccagctgctgccg
cccctcctgtcgccgctctccgacgatccacctcgtaaacgaacctacgacgccagctcc
tctctcggcctggagggcgtcacctcgctgacctcgctctgctccgcctcttcctccact
tccacctcctcgtcctcttcctcacacagacacaggagaggtgaaggcaaggcgtcatcg
cactcgagggccgccagtgaagtcaacacccacgttgagaagcccagcggagacggttac
catgccaacggacaggcggactccgaggtgtggtcggaaccgctgatggaccctggggaa
cctcgcaggccacgactgacatttagcaacacagtccactgtgctgactactacatgcag
gaggccaagagactgaagcacaaggccgatgctttgatggataaatttggtaaagcggtg
aactacgcagacggcgccctctccttcatagagtgcgggaatgctatggagcgagatcca
ctggaggccaagtccccgtacaccatgtactctgagactgtggagctcatcaggtacgcc
atgaggttgaagaacttcaccagccattcagccaccgtcgctgagaagaagctagctgtg
ctatgtaaccgctgtctgtctctgctgtatctgaggatgttccatttgaagaaagaccat
gctgtcaagtactcccgatcgctcatggagtacttcaagaattcagccaagagttcccac
caagaaccttctccctggaggatcaatgggaaggttaacgggaccccgtcgcccctctcg
ctcagcccctccccggccggcagcggagggtctggaggagccccgggctcgtcaggaagc
gtggccattcctcagcggattcaccacatggctgccagtcacgtcaacatcaccaacaac
atcctgcggagctacgagcactgggagacggccgacaggctggcccccgacagccaagag
ttcttcctggagctggactcggtgatggagcctctgggtcagcagagcagcatgacggag
ctggtgagatacatcaggcagggactgcactggctccgcttagaggcccacctgctgtag
DBGET
integrated database retrieval system
