Gasterosteus aculeatus (three-spined stickleback): 120817888
Help
Entry
120817888 CDS
T07457
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120817888 (ssrp1a)
03036 Chromosome and associated proteins [BR:
gat03036
]
120817888 (ssrp1a)
Transcription factors [BR:
gat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
120817888 (ssrp1a)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
120817888 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
120817888
NCBI-ProteinID:
XP_040030473
UniProt:
A0AAQ4RPJ1
LinkDB
All DBs
Position
4:complement(9222496..9232572)
Genome browser
AA seq
713 aa
AA seq
DB search
MGDTLEFSDIYQEVKGSWNDGRLRFGKQSVVYKSSKTGKVDSIPAGDLNLAQWRRVCLGH
GIKLGTGSGHIYKYDGFRDTDFEKISEFFKANYKVELAEKDMCVKGWNWGTAKFSGPLLS
FEVNESTAFEVPLANVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQTDERQDPVE
AFAENVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDLTLTLNMSEDDVERRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEVETKQGNQFTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEKKGMKGKIDEYSDSDEDQHDAYLERMKAEGKIREEGNDSEESDGESD
ESFNPGEEDDDIAEEYDSNASASDSSDDGDDDDDSSKKKAPKVKVVKEKKERKPRREKKQ
KDKGGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQLGKDDKEEWDIKAA
EAKRQYDKAKQEYKESGGGEAAAPAATSSSKKESKKSGGVKEEKKRKSAGGDKEKERAAA
NDSFKSREFIETSEESSSDTDRKSKSKRKKESDDDEMEEEAVSTPASSEEESD
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacgctggagttcagcgacatttaccaggaggtcaaaggctcgtggaacgac
gggcggctgcgtttcggcaaacaaagtgtagtttataagagcagcaagacggggaaggtg
gacagcatcccggcgggcgatctcaacctggcccaatggaggcgggtgtgtttaggtcac
ggcatcaagctgggcaccggctcaggacatatctacaaatatgacggcttcagggacacg
gactttgagaagatctcagagttcttcaaagccaactacaaggtggagctggcggagaag
gacatgtgtgtgaagggatggaactggggaacagccaaattctcggggccgctgctgtcg
tttgaggtcaatgaaagcacggccttcgaggtcccgctggccaacgtgtcccagtgtgcg
acggggaagaacgaagtcaccctggagtttcaccagaacgacgacaccgaggtctccctc
atggaggtccgcttctacgtcccacccagccagacggacgagcggcaggaccccgtggag
gcgtttgctgagaatgtgttgtctaaggccgacgtgatccaggccacaggcgacgccgtg
tgcatcttcaaagagctccagtgtctcacacccagaggaaggtacgacatccggatctac
ccgaccttccttcacctccacggtaaaacctttgactacaagatcccctacaccacggtc
ctccgtctattcctgctgccacacaaggatcagaggcagatgttcttcgtgatcagtctg
gatcctcccatcaagcagggtcagacacgttaccactttctcatcctgctcttctccaaa
gaagaggacctgaccctcaccctcaacatgagcgaggatgacgtggagcgccgctttgag
ggaaaactcagtaaaaacatgtcggggtctctgtatgagatggtcagcagggtgatgaag
gccctcgtcaaccgcaagatcaccgtgcccgggaacttccagggtcactccggggctcag
tgcatcacctgctcctacaaggcgtcctcgggcctcctctatcctctggagaggggcttc
atctacgtgcacaagccgcccgtgcatctgcgcttcgaggagatctcctgcgtcaacttc
gcccgaggcaccacaaccacccggtcctttgactttgaggtcgagaccaagcaggggaat
cagttcaccttcagcagcattgagagagaagagtacggcaaactgtttgactttgtgaac
gccaagaaactcaacatcaagaaccgaggcttcaaagagaagaagggcatgaagggtaag
attgacgagtacagcgactctgacgaggaccagcacgacgcctacctggagaggatgaaa
gccgagggcaagatcagggaggagggcaacgacagcgaggagtcggacggcgagagcgac
gagtcgtttaaccccggagaagaagacgacgacatcgcagaagagtacgacagcaacgcg
tcggccagcgacagcagcgacgacggggacgacgacgacgacagctcaaagaaaaaggcc
ccgaaagtcaaagtggtgaaggagaaaaaagagcggaaaccacgcagagagaaaaagcag
aaagacaaaggcggccccaagaggccgatgagcgcctacatgctgtggctcaactcgagc
cgcgagcgcatcaagtcggagaacccgggcatctccatcacggagatatccaagaaggcc
ggagagatgtggagacaactgggcaaagacgacaaggaggagtgggacatcaaggcggcg
gaggcgaagaggcagtacgacaaagcaaagcaggagtacaaagagagcggcggaggagaa
gctgctgctccagcagcgacatccagctccaagaaggagagtaaaaaatccggcggcgtg
aaggaggagaagaagaggaagtccgctggcggggacaaggagaaggagcgggcggcagcc
aacgacagcttcaagagtcgagagttcatcgagacgagcgaggagagttcgtcggacacc
gaccgcaagagcaagtccaagaggaagaaggaatcggatgatgatgaaatggaggaagag
gccgtgtccacacctgccagctcagaggaagagtctgactaa
DBGET
integrated database retrieval system
