Gasterosteus aculeatus (three-spined stickleback): 120817913
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Entry
120817913 CDS
T07457
Symbol
lingo2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120817913 (lingo2)
Membrane trafficking [BR:
gat04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
120817913 (lingo2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_14
Ig_2
LRR_6
LRR_9
V-set
LRR_EndoS
LRR_LRWD1
C2-set_2
C2-set_3
DUF7617
LRRNT
Motif
Other DBs
NCBI-GeneID:
120817913
NCBI-ProteinID:
XP_040030512
UniProt:
A0AAQ4RVF9
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Position
IV:complement(1524965..1666210)
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AA seq
613 aa
AA seq
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MVDCLSKVMLHAVVSCWQPFLGLALVAVFVGSTQACPSRCECSAQTKAVVCHRKRMPSIP
DGIPTETRILDLSKNKLTMINPDDFLVFPGLEELDLSGNIISYVEPGAFNGLFTMHSLSL
KSNRIKLIPLGVFAALTNLTRLDISDNKIVILLDYMFQDLHNLKYLEVGDNDLVYISHRA
FSGLLSLEMLTLERCNLTVVPTEALSHLHNLVSLHLRYLSISSLHAYSFKKLFRLRNLEI
DNWTSLNQVLPNTLHGLNLSALFITNTNLSSFPYQALKHLPYLTSLNLSFNRIRHIEGGM
LMELVRLKELHLVGTQLTTIELHAFQGLRGLKVLNVSHNRLNTLEKGVFQSPEALEVLLI
DNNPLVCDCRLMWILQKRHSIFFGESQPECSTPEGIRGRPFKEFKETLLSYYVTCTKPKI
RENKTQTITVDEGQQAMLSCSAEGTPRPLVSWLSPRRQVLTSRSHGRVTVHNNGTLEIKS
AEVQDGGVYLCLASNSAGNDTLMTSLAVKSLGSLYANRTQYYTDPSNTTANGTAGVTLGL
DLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDVEYVPRSKSNGTNVDSAE
GQAGPRRFNMKMM
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtcgactgtctgagcaaagtcatgctgcacgcggtcgtctcgtgctggcaaccgttc
ctgggactggccctggtggccgtcttcgtgggttccacccaggcgtgtccctcgcgctgc
gagtgttcagcgcagaccaaggcggtcgtgtgtcaccgcaagcgcatgcccagcatcccg
gacggcatcccgaccgagaccaggatcctggaccttagtaagaacaagctgaccatgatc
aaccctgacgactttttagtctttcctgggctcgaggaactcgacctcagtggaaatatt
attagttatgttgagcccggagctttcaacggactgttcacgatgcactcgctcagcctc
aagagcaatcgtatcaagctgatccctctgggcgtcttcgcagccttaacgaatctcacc
cgactggatataagtgacaacaagatcgtcatcctgctggattacatgttccaggacttg
cacaatctaaagtatttggaagtgggtgacaatgacctggtttacatttctcatcgtgca
ttcagtggacttttgagcctggagatgctaaccttagaaaggtgtaacctcacagttgta
ccaaccgaggccctttcccacctgcataatctggtcagtctccatttacgttacctcagc
atcagctctctgcatgcttactccttcaaaaaactgttccgtcttcggaatttagaaatc
gataattggacttcactgaaccaagtgcttcccaacacactgcacggcctgaatctgtcc
gctctgttcataaccaacaccaacttgtcctccttcccttaccaagccctgaagcatcta
ccctacctgacgagtctcaacctgtctttcaaccgcatcaggcacattgaaggtgggatg
ctgatggaactggtgcggcttaaagagctccatctggtcggaactcagctaacaaccatt
gagctgcatgccttccagggcctgagggggcttaaagtcctcaatgtctctcacaaccga
ctgaatacactggagaagggtgtctttcagtcccctgaggctctggaggttcttctgatt
gacaacaaccccttggtgtgtgactgtcgtctcatgtggattctacagaaaaggcactcc
atcttctttggagagtcgcagccggagtgcagcacacctgaaggtattcgtggaaggcct
tttaaagagttcaaggagactctcctgtcctattacgtcacgtgcaccaagccaaaaatc
cgtgagaacaaaacacaaaccattactgtggatgaaggccagcaggcgatgttgagctgc
agtgccgaaggaaccccgaggcctttggtgtcctggctgtccccacgccgacaggtgctg
acaagcaggagccacggaagagtcaccgtccacaacaatggtacgctggagatcaagtcg
gcagaggtgcaagacggcggtgtctacctttgcctcgcctccaacagtgctgggaacgac
accctgatgacttcgttggcggtgaaaagtctgggatcactgtatgccaacaggacccag
tactacaccgatcccagcaacaccaccgccaacggcacggccggtgtgacccttggctta
gacctaaagaccattttagtgtcaaccgccatgggctgtttcacgtttcttggagtggtg
ttgttttgtttcctgcttcttttcgtttggagcagagggaaaggaaaacataaaaacaac
atagacgttgaatacgtgcctcggtcaaagtccaacggcactaacgttgactctgcggag
ggacaagccggtcctcgtcgttttaacatgaaaatgatgtga
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