Gasterosteus aculeatus (three-spined stickleback): 120817965
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Entry
120817965 CDS
T07457
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04080
Neuroactive ligand-receptor interaction
gat04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120817965 (gabra4)
04082 Neuroactive ligand signaling
120817965 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120817965 (gabra4)
Ion channels [BR:
gat04040
]
Ligand-gated channels
GABA-A
120817965 (gabra4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
120817965
NCBI-ProteinID:
XP_040030597
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All DBs
Position
IV:complement(16408435..16432009)
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AA seq
558 aa
AA seq
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MGSAKKKKKEKATVMEPTFIRILLYFFCLATCVKKISGQTKKDERIYPENFTRILDRLLD
GYDNRLRPGFGGRVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQQWVDRRLMYEGPIEIL
RLNNLMVTKVWTPDTFFRNGKRSVAHNMTAPNKLFRIMKNGTILYTMRLTISAECPMKLV
NFPMDEHACPLKFGSYAYPKTEMIYKWTKEPQQSVEVPPESSSLVQYDLIGQTVSSETIK
SITGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVL
TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQMERAKRKPAR
CPPVPQTTPVKVKDTQEALQQNPDSNGNLRKRMKYISHLEASSHQRAMSTTNISGVGRAR
ALQSLAGGVNGSSSTLSRSSPKSESLLSVASSSAQLVKAAPQATASTPDVMAATPCKQNA
SSSSLQHLLGPKLERIQLMGNKLEPKQTPCSQPTTAGMGGTSKIDKYARILFPVSFGAFN
MVYWVVYLSRETMLAKGG
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgggttccgccaagaagaagaagaaagagaaggcgacggtgatggagcccacttttatt
cggatccttctctactttttctgtttggcgacttgtgtaaagaaaatctctggacagaca
aagaaggatgaaaggatctatccggagaattttacgcgcattttggaccgacttctggac
ggatatgacaacaggctgcgacctggattcgggggacgggtgactgaggtcaagacagac
atctatgtgaccagttttgggcctgtctcggatgtggaaatggagtacacaatggacgtg
ttctttcggcagcaatgggtggaccggaggctgatgtatgagggacccatagagattctg
aggctgaacaacctgatggtcaccaaagtgtggacgccggacaccttcttcaggaacggg
aagagatctgtggctcacaacatgacggcccccaacaagcttttccgcatcatgaagaat
ggcaccatcctctacaccatgaggttaaccatcagtgccgagtgtcccatgaagcttgtg
aacttccccatggatgaacatgcgtgccccctcaagtttggaagctatgcctatcctaag
acagagatgatctacaagtggaccaaagagcctcagcagtcagtggaggtccctcctgag
tcctccagcctcgttcagtatgatctcatcggacagacggtctccagcgaaacgattaaa
tccatcacgggtgaatatgtggtgatgacggtctactttcacttgaaacgtaaaatgggc
tacttcatgattcagacgtatatcccctgcataatgacagtaatcctctcccaagtgtcc
ttctggataaacaaagaatcggtcccggcacgcacagtctttggcatcaccactgttctg
accatgacgacactcagcatcagcgcccgccactccctccccaaggtctcctacgccacc
gccatggactggttcatcgccgtctgcttcgcctttgtcttctccgcgctcattgagttt
gccgccgtgaactactttaccaacgcgcagatggagcgcgccaagaggaagccggccaga
tgtcccccggtgccccaaaccacacctgtcaaggtcaaggacacgcaagaagcgctgcag
cagaatcccgacagcaacggtaacctgagaaagcgcatgaagtacatctcccatcttgag
gccagcagtcaccagagagccatgtcaaccaccaacatttcgggcgttggccgagcgaga
gcgctgcaaagtttggccggcggggtcaacggcagctcctccaccctctcgcgctccagc
cccaagtccgagagcctgcttagcgtggcctcttcttctgcccagctggtgaaggccgcg
ccccaggccacggcatccacaccggacgtgatggcggccacgccgtgcaagcagaacgcc
agctcctcgtccctgcagcatctgctggggcccaagctggagcgcatccagttgatgggg
aacaagctggagccaaagcagacgccgtgctcccagcccacgaccgccggcatgggtgga
acaagcaaaattgacaagtacgcaaggatcctattcccagtgtcctttggtgcgtttaac
atggtctactgggtggtttacctgtcaagggaaaccatgctggctaaagggggctag
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