Gasterosteus aculeatus (three-spined stickleback): 120817974
Help
Entry
120817974 CDS
T07457
Name
(RefSeq) transforming growth factor beta activator LRRC32-like isoform X1
KO
K26316
transforming growth factor beta activator LRRC32
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120817974
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_6
LRR_9
LRR_LRWD1
LRR_NXF1-5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
120817974
NCBI-ProteinID:
XP_040030614
LinkDB
All DBs
Position
4:12796847..12800278
Genome browser
AA seq
656 aa
AA seq
DB search
MSLYTFLRLHFVCLFVPLVYFRMVSVYRRLCQEQTKEHSWSNQNLYSVPLDLDVRLRRLD
LSNNFIRQLHPLALPNLQQLDLSSNQLDLIYEGAFEELAQLEELNLSRNLLSKDIGNNGK
ALQSIIRLKSLDISMNDLGDDAVELYLRNKPSLDQLKMTGNALTTLSPNLFKESKGLRAI
TIDDNHISVIEEGTFEPLRQLELLNLARNNLAHICDFKLHQVKYLNLSRNSVEFFVTRED
DQLYRLEILDLSHNKLLYFPIVPKMNRLKYLHLQNNLVGALNSEVAMVSEANALYSEIMS
EKIVRKNNLHSNWRLMPLIYIDLSYNHFRSFPLETLSLLTSLETLNFSFNCLQNIAWNIR
HDDESGISRQLFFPSLKYLNLQSNGLAFISPLFLNALTQIETLNLQDNSVQPCASIDRST
QQIHLNTSCVVIGQLRTLKHLNLKENNIKMLQPNTFLNTALVSLNLAGNSHMVVGRDALE
GVQETLQSLIISEMNMTSSDLSLPCMPALTQLNISGNRLDLLPSSLSCSPLTEVDIRNNH
FESLNESLILDLSVRLNIMYISGNHFNCCDSSWLLILDGLKMKLPDANDVVCFTIDRSIA
MREYLRNPSGYCLFHTKAQEINFGTMIVIVLFVTVILTVLIIFTRKVCCTQISFIV
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtctctttatacctttctccgcctccacttcgtctgtttatttgttcctctcgtctat
tttagaatggtttccgtttaccgaagactatgtcaggaacaaacaaaggagcactcttgg
agcaaccagaacctttattcggtccctctggatttggacgtaaggctcaggaggctagac
ctgtccaacaacttcatcagacagctgcacccgcttgctttgcccaacttgcaacagctg
gacctgagctccaaccagctcgacctcatctatgagggcgcttttgaagaactcgctcaa
cttgaggagttgaatttgtccagaaatttgctgagcaaggacattggcaataacggcaaa
gcccttcaatccatcatcagattgaagagtttggacatatccatgaacgacttgggtgat
gatgcagtggaactgtatcttcgaaacaaaccttctcttgatcaacttaagatgaccggt
aatgctttgacaacactttcacccaatttgttcaaagagagtaaaggtttgagggccatt
actattgatgacaatcacatatcggtgatagaagaggggacatttgaacctttgagacaa
ttagagctgctaaatttggccagaaataacctcgcacatatctgtgattttaaattacat
caagttaaatatctgaacctcagtcgaaattcagttgagttctttgttacacgtgaagat
gaccagttgtacaggcttgaaatacttgatctaagtcacaacaaactcctttatttccca
attgttccaaaaatgaaccgtttgaagtatctgcatttacagaataatttggttggtgct
ttaaattcagaggttgcaatggtatcagaggccaatgctctttatagtgagataatgagc
gagaaaattgttagaaaaaacaacttgcactcaaactggaggctgatgccactgatttat
attgatctcagctataaccacttcagatctttcccacttgagactctgagccttcttaca
tcattggaaactctgaattttagtttcaactgtttgcaaaacattgcctggaatataaga
catgatgatgaatcaggaatcagcaggcagcttttctttccatccttaaagtaccttaac
cttcagagtaacggacttgcattcatttctccactttttctcaatgcgctcacgcaaata
gaaacattaaatctacaagacaattctgtgcaaccttgcgcctccattgaccgatcaaca
cagcagatacatctcaacacctcctgtgtcgtcattggccagctaaggactcttaaacac
ctcaatcttaaggaaaacaacatcaaaatgcttcaaccgaacacatttctaaacaccgct
ttggtttccttgaaccttgcaggaaattcccatatggtagtcggaagggatgcattagag
ggtgtgcaagagactcttcagtccttgatcatcagtgaaatgaacatgaccagctctgat
ctgtctttaccctgcatgccggcgttgactcagctgaacatatctggcaaccgcctcgat
ctgctaccaagcagtttgagctgctcccccctgacagaagtagacattagaaataaccat
tttgagtctttaaacgaatctttgatccttgatttatcggtgcgccttaatattatgtac
ataagtggaaatcattttaactgttgtgacagtagctggcttctaatcctagatgggctg
aagatgaaactgcctgatgccaatgacgtggtgtgctttacaattgatagaagcattgca
atgagagagtatctgagaaacccttcaggttattgtttgtttcatacaaaagcacaggaa
attaactttggaacaatgatcgtgattgttttatttgttactgttatattgacagtgctc
atcatattcaccaggaaggtgtgttgcacacaaatatcctttatagtgtga
DBGET
integrated database retrieval system
