Gasterosteus aculeatus (three-spined stickleback): 120817976
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Entry
120817976 CDS
T07457
Symbol
rsf1a
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120817976 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120817976 (rsf1a)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
120817976 (rsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
DDT
Motif
Other DBs
NCBI-GeneID:
120817976
NCBI-ProteinID:
XP_040030622
LinkDB
All DBs
Position
I:17554431..17578313
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AA seq
1460 aa
AA seq
DB search
MAAPVVARSSGPALCPSFAEVCSFLERFGAVLDLPEMTFPQMERYLRDKTTVPKPLVELH
VKLLRKLGRSVTTDRWEKYLAKVCQELNGTWAWELEQEGYMGMSMECKSCILKYLCECQF
DDNLKFKTAINEEEPEKMRLQPVGRDQQGLMYWLQLDHEQNIRLYTEEQDDLDGSTWNCI
VRTRNDLAEALELLKSQVEGKQNPDADPNQNLCGSRSSSPTQKDEVDEAIGVTEPSRTAE
QRTDRQTVHPVKEEEPLTQEVKLEETLPTKQANTEVEVKEEKVDSKSPPVFDNRVSTITT
IVKLESKDPDAPKNAVSVVMAPGATATKPGAIKEGEAERAVVRSSQQAKIPLKKRELKIA
ESYHGNHLNNSNNNNSSIIVCNPSVIQTKDASKEGKLPGPLAPPGGLTTSQPPPQQPLVT
ASRQELSNGGAFLPLLHKEGQNGVIGVIGQVGVVSHVGVIRSPSERHRAPGAEQQEQNGP
GLDQREPAAEQDEREVSRQSVLVRKGAVEGGAAGAASDAQMAEKLPPPPPLKSDPLPDAV
GGKVVSISLSSLSMCQEDPKQQAAGDPGEETTAEPSDRGTDTREQKEDDGDKRTSAVCGH
PLAGEGATDDHKKNNSTLGKSEAESESTALLLQADQLDTKDHRGDGVNGGLAAPAKVKEA
GLGSAERQGPLEEASSELQKEGIRLKIKIPPHRRNKLKGKGGKEEQKEREQEVNDDGRLL
RRSARICRSALPTCRPSSKAADSGGKKPQKKQTLLGRARGEEEEEEEDDEEEEDEEEQSS
TAKNDGKTEAVGQIRKQKGKRRHRRPRWSNIRTKRRKLTEGEEAEGWGRKGGEGESEGER
DSEESFKSGEIPSEDACSHCGLPNHPELILLCDSCDSGYHTACLRPPVMLIPDGEWFCPP
CQHKLLCEKLEEQLQNLDSALKKRERAERRRERLVYVGISVENIIPEGDQPEEEKSTKKK
DPKKSKNLGRRSTRTRKNISYRFDDFDDAIDEAIEEDIRDICGGAGQGRDIAAILSEEGA
KGSQRPIRSQADSARNRKRRRLNDLESDSTAAESEDEFMLSNSSEDEDFAASGPDDDEVE
DEEAGSVESGSRSARAVRGLPKQRPGIKKRRDRKRPRRRRRRSSEEEEEEEESDEEIGSD
QYSDMSDSDADKKRRGLRRGQRQQVNYRETSESSDNSRASTKNFKVKGRGRPRKDHLSSD
YSDASPSTRETEEDDDYEDEEEDGQRRRGKKRRREEEDLRRNRVRQKRRRHGEEEREQGS
RLKKTRLEGRDKDKARRLRRPQREEEDAENMGRGKRREILSLQRRKRLAQMLKKRRPSTD
DESESSSDDSDSTTSSSEEDRPVRKRLNRIDSDDDEEEDEEEEEEGGRPEKAPMCSAVEK
RSDSDTQEKGRGRSLSPSNRHRTSRGPAKPGDGSPAEPGDGAGSDGGGRHNGPSNPEEKD
EVEEEGHTDSLNSAQNSPRS
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggtggtggcgaggagctccggcccggcgctctgcccgagcttcgcggag
gtctgttctttcctagagcgattcggagcggttctggacctgcccgaaatgactttcccg
cagatggagcggtatctgcgggacaagacgacagttcccaaaccgctggtggagctccat
gtgaagctgctcagaaaactggggaggtctgtgactactgaccgctgggaaaaatacctg
gctaaggtttgccaggagctgaacggcacctgggcatgggagctggaacaggagggctac
atggggatgtccatggagtgcaagtcctgcatcctcaaatatctctgtgagtgtcagttc
gatgacaaccttaagttcaagacggcgatcaacgaggaggagccggagaagatgcgtctg
cagcccgtcggtcgggaccagcagggcctgatgtactggctccagctggaccacgagcag
aacatccggctgtacaccgaggagcaggacgatctggacggatcaacttggaactgcatc
gtcaggactcgtaatgacctggccgaggctctggagctgttgaagtctcaggttgaagga
aaacagaatccggatgcggatccgaaccagaacctgtgtggttccagaagcagcagccct
acacagaaagatgaagtggatgaagccattggagtcaccgaacccagcaggaccgctgag
caacgcaccgacagacagacagtccatcctgttaaggaggaggagccactgacacaagag
gtgaagctggaggagacgctgcccaccaagcaggcaaacactgaggtcgaggttaaagag
gagaaggtcgacagcaaatctccgcccgtcttcgacaaccgcgtgagcaccatcaccacc
atcgtcaagctggaatccaaggaccccgacgcccccaaaaacgctgtgtcggttgtcatg
gcgccgggcgcgaccgccacgaagccgggggcaatcaaagaaggggaggcggagcgggcg
gttgtcaggagcagccagcaggccaagataccactgaagaagagggagcttaagatcgcg
gagagctaccacggcaaccacctcaacaacagtaacaacaacaacagcagtattattgtt
tgcaacccatcagtgatccagaccaaggacgcgagcaaagagggcaagttgcccggcccg
ttggcgccccctggtggtctgaccacctcacagccgcctcctcagcagccgttggtcacc
gcgtcgaggcaggaactgagcaacgggggagcgtttctccccttgctgcacaaggaggga
caaaatggcgtgataggggtcataggtcaagttggcgtcgttagtcacgtgggggtcatc
cgcagcccatctgagcgccacagagcccccggcgccgagcagcaagaacaaaacgggccc
ggtttagaccagcgggagcccgccgccgagcaggacgagagggaagtcagccggcagtcg
gtgctggtgaggaagggagctgtggaggggggggcggccggagcagccagcgacgctcaa
atggctgaaaaactaccgccaccgccacccttaaaatctgatccgctccccgacgctgta
gggggaaaagtagtttccattagcctgtcctcactgtctatgtgccaagaggaccccaaa
caacaggcggcaggagacccgggggaggagacgacagcggagccgtcagaccgggggact
gacactcgagaacagaaggaggacgacggggacaagaggacaagtgcggtttgtggacac
cctttagcaggggaaggagctacagatgaccataaaaagaataatagcactttaggaaag
tcagaggcggaatctgagagcactgctctgcttctgcaagccgaccagctggatacaaag
gaccaccgtggagacggggtaaacggggggctggctgccccggcgaaggtgaaggaggct
gggctcggatcggcggagaggcagggtcccctagaggaagcctcctctgagctccagaaa
gaaggaatccggttaaagatcaagatcccccctcaccggagaaacaagttaaaggggaag
ggggggaaggaagagcagaaggagcgggagcaggaggtgaacgacgacgggaggctgctg
aggagatctgcgaggatttgccgatctgctttgccaacctgcaggccgagctccaaggcg
gctgacagcgggggaaagaagccgcaaaaaaaacagacgctgctcggcagagcgaggggg
gaggaggaggaggaggaagaagatgatgaagaggaggaggatgaagaggaacagagttca
actgccaagaatgatggaaaaacagaagctgtcggccaaataagaaaacagaagggtaaa
cggaggcatcggcgcccccgatggtccaacatccgcacaaagagacgcaaactgaccgag
ggggaggaggcagaaggctgggggaggaaagggggcgagggggagagcgagggagagaga
gactcagaggaatcgttcaaatcgggcgagattcccagcgaggacgcctgcagtcactgt
ggcctgcccaaccaccccgaactgatcctgctgtgtgactcttgtgacagcggataccac
actgcctgtctgcggccgccagtcatgttgattccagatggagagtggttctgtcccccc
tgccagcataagctgctgtgtgagaaactggaggagcagctgcagaacctggacagtgct
ctgaagaaaagagagcgagcagagaggaggagggagcggctggtgtacgtgggaatcagt
gtggagaacatcatccctgagggagatcagccagaagaggagaagtcaacgaagaagaaa
gatcccaaaaagagcaagaatctcgggaggagatcaaccagaaccaggaagaacatcagc
tacaggtttgatgactttgacgatgccattgatgaggcgatcgaggaggacatcagagac
atctgtggaggagcaggacaaggccgagacatcgccgccatcctttcggaggaaggagca
aaggggagccagcggccaatcagaagccaggcggactctgccaggaacaggaagagacgg
agactgaacgacctggagagtgacagcacggcggcagagagcgaagacgagttcatgctc
agcaacagctcagaggatgaagattttgccgcgtcaggtcctgatgatgacgaggtggaa
gacgaagaggcgggcagtgtagaaagtgggtcccgctccgcgcgagcggtgagaggattg
cccaagcagcgacccggcatcaagaaacgcagggacaggaagcggccgaggcggcggcgg
agacgctcctctgaggaggaggaggaggaggaggagagcgacgaagaaataggctcagat
cagtacagcgacatgagcgacagcgacgccgataagaagaggcggggattgaggcgcggc
cagcgccagcaggtcaactaccgcgagacgtccgaatcgtcggacaactcccgggcctcc
accaagaatttcaaggtcaaaggccgcggcagacctcgcaaggaccacctctccagcgac
tacagcgatgcgtcgccttctacccgggagacggaggaagacgatgattatgaagatgag
gaggaagatggccagaggagaagagggaaaaagaggagaagagaggaggaagacctccgg
cgaaaccgagtgagacaaaagcgaaggagacacggcgaggaggagcgcgagcaagggagt
cggctcaaaaagacacgcctggaggggagggacaaagacaaggcgaggaggttaaggagg
ccgcagagggaggaggaggacgcggagaacatgggcagggggaagaggagagagatcttg
tcgctgcagcgccgtaagcgcctcgcccagatgctgaagaagaggcggccttcaacggac
gacgagtcggagtcgtcttccgacgactccgactcgacaacgtcgtcgtcagaagaggat
cgccccgtccgcaaaagactgaaccgcatcgactccgatgacgatgaggaggaagatgag
gaggaggaggaggagggcgggaggccggagaaggcaccgatgtgttcagcggtggagaag
aggtccgacagcgacacccaggagaaggggaggggccgcagcctgtctccgtcgaacaga
catcggacctccaggggcccggcaaagcccggggacgggagtcccgctgagcccggggac
ggtgcgggatcagacgggggtgggaggcacaatggcccctcaaatccagaggagaaggac
gaggtggaggaggagggccacacagactcgttaaactctgcccagaacagtccgcggtcg
tga
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integrated database retrieval system
