Gasterosteus aculeatus (three-spined stickleback): 120817977
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Entry
120817977 CDS
T07457
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B-like
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04060
Cytokine-cytokine receptor interaction
gat04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120817977
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120817977
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
gat04052
]
120817977
04090 CD molecules [BR:
gat04090
]
120817977
Cytokines and neuropeptides [BR:
gat04052
]
Cytokines
Tumor necrosis fators
120817977
CD molecules [BR:
gat04090
]
Proteins
120817977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
120817977
NCBI-ProteinID:
XP_040030619
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All DBs
Position
IV:12795039..12796953
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AA seq
234 aa
AA seq
DB search
MLYSALLSLAAFMFCLSVFLVHRASVLENDLRKLQGEIILQFNQPRSEGVNGKMAKMSER
REDIKPSTFPNSLSSLKVSSRRVKRQQGSCRAPTSFLQLTANTNKQPDIKGNITVIPWTV
SAQQGNAISQKENRIVVQEDGYYLVFGQVLFKSPSTVMGHIIQSLSSTRTERTPTQLLCC
LQEMPDKTPANTCYTAGVVQLLQDDELELVIPYRPHSLISMDADSTFFGVIQLN
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgctttacagcgccttattgtcacttgcagcatttatgttttgtcttagtgttttcctg
gtgcacagagccagtgttttagaaaatgatttgcgcaaactccaaggggaaataattcta
caattcaatcagccacgttctgagggagtcaatgggaaaatggccaagatgtctgaaaga
agggaggacataaagccaagtactttcccaaacagtctgagttctctgaaggtttcttcc
aggagagtgaaacggcaacagggcagctgcagagctccaacatcattcctgcagttaaca
gctaacactaacaaacagccagacataaaaggaaatataaccgtaatcccttggactgtt
tctgcgcagcaaggaaatgcaatttcacaaaaggaaaacagaattgttgtccaagaagat
ggatattacttggtgtttggacaagtgttgttcaaaagcccaagtacagtcatgggtcac
atcattcaaagtttgagctccactagaacggagaggacaccaacacaactcttgtgctgc
ctgcaggagatgcccgataaaactccagccaatacgtgttacactgcaggtgttgtgcag
ctgcttcaggatgatgagcttgaattggtgatcccgtacaggccccattccctcatttct
atggacgcagactccacgtttttcggtgtcatacagctaaactga
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