Gasterosteus aculeatus (three-spined stickleback): 120818033
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Entry
120818033 CDS
T07457
Symbol
rnf4
Name
(RefSeq) RING finger protein 4 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120818033 (rnf4)
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120818033 (rnf4)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120818033 (rnf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_4
Prok-RING_4
zf_RING_Vps8
zf-rbx1
Rtf2
zf-C3HC4_4
RING_XB3-XBAT31
zf-UDP
TRAF3_RING
zf-RING_11
zf-Nse
zf-RING_6
zf-C3HC4_5
zf-RING_10
zf-RING_16
IBR_1
MSP1a
zf-ANAPC11
HypA
Motif
Other DBs
NCBI-GeneID:
120818033
NCBI-ProteinID:
XP_040030708
LinkDB
All DBs
Position
IV:complement(15340..21165)
Genome browser
AA seq
195 aa
AA seq
DB search
MNSYRKRKTSGSPLIARTKTSRGANARRTANRLTANVSTLAVPSTETIAMMDNADGTVEE
VVDLTCEGTEASVVDLTNNDSVLLVDEGPQNERVPTGESYVVSSDEDEDAPPIANAAIMP
SVQSNSSSRSTPGTISCPVCLDSYLEIVESGRLVVSTKCGHVFCSQCLRDALTSSHTCPT
CRKRLTHRQYHPLYI
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaacagctataggaagaggaagacgtcaggaagtcctctcattgcaaggaccaagacc
agcagaggggccaacgctaggaggacggctaaccggctaacggctaacgtcagcacgtta
gccgtcccctccacagagacaatcgccatgatggacaacgctgatggcactgtagaagag
gtggtggatctgacctgtgaaggaacagaagcttctgtggttgatctgacaaacaacgac
tctgttctgcttgtggacgaaggtccacagaatgagagagtgccgacaggtgagagctac
gttgtcagcagtgatgaagatgaagacgcgcctcctatcgccaatgctgcaattatgccc
tctgtacagtcaaacagctcctccaggtccacaccgggtacgatcagctgtcccgtctgc
ctggactcgtacttggagattgtggagagcggacgactggttgtttccactaaatgtggt
cacgtcttctgcagtcagtgtctaagagacgctctgacttcatcacacacctgtcctacc
tgcaggaagagactaacccatcgccagtaccaccccctgtacatctga
DBGET
integrated database retrieval system
