Gasterosteus aculeatus (three-spined stickleback): 120818074
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Entry
120818074 CDS
T07457
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120818074 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120818074 (atrx)
03036 Chromosome and associated proteins [BR:
gat03036
]
120818074 (atrx)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
120818074 (atrx)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120818074 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
120818074
NCBI-ProteinID:
XP_040030767
LinkDB
All DBs
Position
4:11923619..11948857
Genome browser
AA seq
2096 aa
AA seq
DB search
MSLASSESHPDQMSDKAEEPGSSAETMKASSSRNRRKPTTVCKHTGLKDSDASAESENEV
ATSDNPSDNNTSNVSKGTLVMRPAGNDNKGAMKLRVDFKQKHTDDTLQEKVNCTACGKQV
YQFQRNSVYEHPALKVLICKSCYKYYTSDDINRDSDGMDEQCRWCAEGGKLICCDYCNNA
FCKKCILRNLGRKELSVITDENSKWHCYVCRPEPLQDLVSKCHSIMEKQEAKERKPDKSE
ERESKRHKNKEVKEHKAILNGKEHTEGSGSMTFSYKKLQVPKELIKKAKKLVETTTGLNN
TFIQFIQQAADKQEDKSIRYRHLKAFRAVLADLKKAHSALEAALVPEFRNMELQNGNEGP
HIVRKSPNVVYPVENDHLDNIADEEEEAGELALDETDDLASGEADELEAKKADYLAAEEA
DNPAAKKTNDLAAEEADNLAEEEAVGEEEADVVPQEVPDIAVEEADHAQAEDDEADHAEA
EEANHAAAEADRRQHNEHKGSDVPKTKENQTQADGTKKIIKTEECDDGIVSAGEMSLDQD
IMSVPPSVPEELFQMVESLADSTMLSQSDTNLVKDAVKKLNGNSKDSRPPQPKVKNLIVK
LTPVPVVTTRGSRSSSRNREKAGETQKGCEEPEKEKDNAAKAVDRTASPPPSRRSSRLKT
TPLRKQAENKGKEESSESEEDCKGKPKCSKKSSNDKKEKTKISEKNKMDSDSDEIPHILL
EKAAAGQSTDEEQEGTSAKKCLFKLKNTSTQDTDKATKRKRKSESSDSDLGIKSKKTSKK
NKQNGSDLTDSDQEKETKSKAATSKRRSSRVKKQDEAKEEGKGSPERNAAKRRRSYEIKR
KGRSLREASKQQLSSSEEEEEEQAEGDSAEDSDEQKIKPIVEDNVVGGSGAFHQSSGDEE
EDKDRVPQDCEDDDDDPENRIAKKMLLAQIKSNYSSGAESSSDNEDPEKDEKSSKKFKSE
NDDDDEEEQQDEDSEDSSAEVKKRVGRHKLLRHKLSLSEGESGEEKASSKEKGGKKKSGQ
KVRSDDSSESDSDFEKSEASEESGISEELSESENEGKRRKTRSSKKKDEAKQKSSKQQQQ
QKKKRRRIKVQDSSSSNEKSGKEDGDEDDEDHKGRKKIRKILKDDKLRTETRDALKEEED
RRKRIAEREALREKLREVIVLKESSHVTCPCPITTKLVLDEDEETKEPLVQVHRNLVTKL
KPHQVDGVQFMWDCCCESVKKIEKSSGSGCILAHCMGLGKTLQVVTLLHTLLLCEKLEFT
TALVVCPLNTVLNWLNEFEKWQVGLKDDESLEVIELATVKKAQDRAYALQRWQESGGVMI
IGYEMYRNLTQGRNTKSKKLKETFQKTLVDPGPDMVICDEGHILKNEASAVSKAMNSIRT
RRRIVLTGTPLQNNLVEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTLQDVRIM
KKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLSIRVTPIQCKLYRYYLEHFTGVGNA
LEGGRGRAGTKLFQDFQVLSRIWTHPWCLQLDYISKENRGFFDEDSMDEFIASETEESSM
SMTSEDEKAKKKKKQGKGKKRGSDDSDSDDVEVIKEWNTSSRGKNGEGRNRPEVVEEPRP
ANSADGSPTHDWHKEFVADADGEILEHSGKMVLLFEILRMAEEMDEKVLVFSQSLISLDL
IEDFLELACRAKDDEKVSPYKGEGKWFRNIDYYRLDGSTNATTRKKWAEEFNDTSNPRGR
LFLISTRAGSLGINLVAANRVIIFDASWNPSYDVQSIFRVYRFGQIRTVYVYRFLAQGTM
EEKIYDRQVTKQSLSFRVVDQQQIERHFTGVELAELYTFEPEMLDDPSGKKSKKATPMLP
KDPFLAELLQNNKDQIVCYHEHESLLDHKEEEALSEEDRKAAWAEYEAEKKGVFVRNNYQ
PGYPQMDMGYFNFNMAALAAMTNQQLEDLINQGRQKVIEATTSLKTLARESPEDTIARLW
KENPALTESQVQSMAIGHQASVEQEIKRREAVYREVLTRQQTLMMYVQKLITNRKVQEQQ
LAMANQANYLNQLAMQNGMMGSGGISQMDLVGLYQQLHGLGSHQGMGKNPGPSKGL
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggcttcttctgaatctcacccagaccaaatgtcagacaaggcagaggagcct
ggaagctcagcagaaactatgaaggcttcctcttctcgcaacagaaggaagcccactact
gtatgtaagcacactggactgaaagactccgatgcctctgctgaaagtgaaaatgaagtt
gccacttctgacaatccttcagacaataatactagcaacgtatctaaaggcactttagtg
atgaggccagctggaaatgataataaaggtgccatgaagctccgagtagattttaaacag
aaacatacagatgataccctgcaggagaaggtgaactgcactgcctgcggtaaacaagta
taccagtttcagcgcaactctgtgtatgagcatcctgcactcaaagtactcatctgcaag
tcttgctacaagtattacacaagtgatgacatcaacagagactctgatgggatggatgag
cagtgcaggtggtgtgctgaaggtggcaagctcatctgctgtgactactgtaacaatgcc
ttctgcaagaagtgcatcctgcgcaatctgggcaggaaggagctctctgtcattacggat
gagaactcaaagtggcactgctacgtctgcaggccagagccccttcaggatcttgtctcc
aaatgccacagcatcatggaaaaacaagaagccaaggaacgaaaaccagacaaaagcgag
gaacgcgagagcaagagacacaagaacaaagaagtcaaagagcacaaagcaattctcaat
gggaaagaacacaccgaaggctcagggagcatgacattctcctacaaaaaactacaggtg
cccaaagaacttataaagaaagcaaaaaagcttgttgaaactacaactggtctgaacaat
acattcatccagttcatccaacaggctgctgacaagcaggaagataagtctatcaggtat
cggcatttgaaagccttcagggcagtgctggctgatttgaaaaaagcccacagtgcttta
gaggcggctttggtgccagagttcagaaacatggagttgcagaacggtaacgaaggaccg
catattgtgagaaagagcccaaatgttgtgtatccagtagaaaacgaccacctggataat
atagctgatgaagaggaggaggctggtgaactagcattggatgagactgacgacctagca
tcaggggaagctgacgaactagaagcgaaaaaggctgactatctcgcagcggaggaggcc
gacaatccagctgcgaagaagactaacgacctagctgcagaggaagctgacaacctagcc
gaggaggaagcggtaggggaggaggaggccgatgtagtgccacaagaggtccctgacata
gcagtggaggaggctgaccacgctcaggcggaggatgatgaggctgaccacgctgaggcg
gaggaagctaaccatgcagcggcagaggcagacaggcggcagcataatgagcataaaggg
tcggatgtgcctaaaacaaaagagaaccaaacccaagctgatggaaccaaaaagataatt
aaaaccgaagaatgtgatgacgggatagtgtcagctggtgaaatgtctctggatcaagac
attatgtctgtgcctccttcggttcccgaagagctttttcaaatggtggagagccttgcg
gattccaccatgctctcacagtctgataccaatttggtcaaagatgctgttaaaaagtta
aatggaaattcaaaagactctcgacctccccagcccaaggtgaagaacctcattgtcaaa
ctaactccagtgccggttgtgacgacacgtggttccaggtcctcctccagaaaccgcgag
aaagccggggagactcagaaaggttgtgaagagccagagaaggaaaaagacaacgctgct
aaagcagtagataggacagccagcccgccacccagccgtcgctctagtagattgaagact
acccccttgagaaagcaggctgagaataagggcaaggaagaatcctccgagtcagaggaa
gattgtaagggcaagcccaagtgctccaagaaatccagtaacgacaagaaagagaagacc
aagatttcagagaagaacaaaatggattctgactctgatgaaatccctcacatactgctg
gagaaagcagcagctggccaaagcacggatgaggaacaggaaggcacaagtgctaaaaag
tgtttattcaaactgaaaaacacatccacacaggatacagacaaagctaccaaacgcaaa
aggaagtctgaaagctctgattcagacttggggatcaaaagtaaaaagacgtccaagaag
aataaacagaatggctcagacttgaccgactccgaccaggaaaaggagaccaagagtaaa
gcagccacatcgaagaggagatccagccgtgtaaagaagcaagatgaagccaaagaagaa
gggaagggttcccctgagaggaatgcggccaagcggagacggtcctatgaaattaagcga
aagggaaggagcctcagggaagcctccaagcagcagttgtcctccagtgaagaagaggag
gaggagcaggctgaaggtgactccgcagaggacagcgacgagcaaaagatcaagcccatt
gtggaggataacgtggttggaggaagtggggctttccatcagtcgtcaggagatgaagag
gaggataaagaccgagtccctcaggattgtgaagatgatgacgatgatcctgaaaacagg
attgcaaagaaaatgcttctcgcccaaataaaatccaactattcatctggagcagagagt
tcctccgataatgaagatccagagaaggatgaaaagtcctctaagaaatttaaaagcgag
aatgatgatgacgatgaagaagagcaacaagacgaggattcagaagattccagtgctgaa
gtgaagaaacgcgtaggacgccacaaattgcttcgtcataaactctcgctgagtgagggt
gaatcaggagaggagaaggcttccagtaaagagaagggcggaaagaagaagtctgggcag
aaagtccgcagcgatgactcttcagagtccgactctgactttgagaagtccgaagccagc
gaagagtcggggataagcgaggagctcagtgagtcagagaacgaagggaagcgtcgaaag
accagatcttcgaagaagaaggacgaagcaaaacagaaaagttccaagcagcagcagcag
cagaagaagaaacgacgcaggatcaaggttcaggattcctcttccagcaacgagaagagt
ggaaaggaagacggtgacgaggacgatgaggaccacaaaggacgcaaaaagatccgcaaa
atcctgaaggacgacaagctgcggacagagaccagggacgcattgaaagaagaggaggac
cgtaggaaacgtatcgctgagagggaagcactccgagagaaacttcgagaggtgattgtg
ctgaaggagtcttcccacgtaacctgtccctgtcccatcaccaccaaactggtcctggat
gaggatgaagagaccaaggagccgctggtgcaggtgcacaggaaccttgtcacaaaactc
aaacctcaccaggttgacggggtgcagttcatgtgggactgttgctgtgaatctgtaaag
aagattgagaagtcctctggctccggctgcattctcgcccattgcatgggtctgggaaaa
actctgcaggtggtgacgttacttcacacgttgctgctttgtgagaagctggagttcacc
acagcactggtggtttgtcccctgaacactgtgctcaattggctcaacgagtttgagaag
tggcaagtcggtttgaaggatgacgagagtttagaggtgatcgagctggccacagtgaag
aaggcacaggaccgggcctacgccctccagcgatggcaagaaagtggtggcgtgatgatc
atcggctatgagatgtacaggaacttgacacagggaaggaacactaagagcaagaagcta
aaagagacatttcagaagacacttgtcgatccaggtcccgacatggtgatctgtgatgaa
ggtcacatcttaaagaacgaggcgtctgctgtgtccaaagcgatgaattccatcaggacg
aggaggaggatcgtgcttactggaacaccgctgcaaaataaccttgttgaataccactgc
atggtgaacttcatcaaggagaaccttctggggtccgttaaggagttcaggaaccgcttc
ataaaccccattcagaatggtcagtgtgccgactccacactgcaagatgtccggatcatg
aagaagagggctcacatcctctatgagatgctggccggttgtgtccagaggaaagattac
acagcgctcactaagttcctgccaccgaaacacgagtatgtgttgtcgatcagagtgact
ccgattcagtgcaaactctacagatactatttggagcacttcacaggtgtggggaatgcg
ctagaggggggccgaggccgcgcggggaccaaacttttccaggatttccaggtgctcagc
agaatctggacccatccctggtgccttcagctggactacatcagtaaagaaaaccggggt
ttctttgacgaggacagtatggacgagttcatcgcttcagaaaccgaagagtcgtcaatg
agcatgacctccgaggacgagaaggccaaaaagaaaaagaagcaaggaaagggaaaaaag
cgaggatctgatgactcggacagtgatgacgtggaggtcatcaaggagtggaacaccagc
tctcggggcaaaaacggagagggtcgaaacagaccagaggttgtagaagagccccgtccc
gctaactctgccgatgggagccccactcacgactggcacaaagagtttgttgccgacgct
gacggcgagatcctggagcactctggaaagatggtgctactgtttgagatcctgcgcatg
gccgaggaaatggacgaaaaagtcttggtgttcagtcagtctctaatctctttggacctg
attgaggatttcctggagctggcttgcagagctaaagatgatgagaaggtttccccgtac
aaaggtgaaggcaagtggttcaggaacattgactactatcgtctggacggctccaccaac
gccaccaccaggaagaagtgggctgaagagtttaatgacaccagtaacccaagaggtcgt
ctgttcctaatttcaacgcgagccggctctcttggtatcaacctagtggccgctaaccgg
gtgatcatctttgacgcctcctggaacccctcctacgacgtccagagtatcttcagggtc
taccgctttggccagatcaggacagtctatgtgtacaggttcttggcgcagggcacaatg
gaggagaagatttatgatcggcaggtgaccaaacagtccctgtctttccgggtggtggac
cagcagcagattgagaggcacttcactggcgtggagctggcagagctctacacctttgag
ccggagatgctggatgatccctctgggaagaagagcaagaaagccacacctatgctccct
aaggaccccttcctggccgagctgctgcagaataataaggaccagatcgtgtgttaccat
gaacacgaatccctgctggaccacaaggaggaagaagccctgagcgaggaggatcgcaag
gcagcctgggccgagtatgaagccgagaaaaagggtgtgtttgtgaggaacaactaccag
cccggatacccccagatggacatgggctacttcaacttcaacatggcggctttggccgcc
atgaccaaccagcagctggaggaccttataaaccagggacgacagaaagtcatcgaagcg
acaacgtctctgaagactctagcacgcgagtcaccggaagacacgatcgccagactgtgg
aaggagaacccagcactcacagagagtcaggtccagtccatggcgataggccaccaggcc
agcgtggagcaggagatcaagcgcagggaggccgtgtacagagaagtgctcacccggcag
cagacgctgatgatgtacgtccagaagctgatcaccaacaggaaggtgcaggagcagcag
ctcgccatggccaaccaggcaaactacctgaaccagctggccatgcagaacggcatgatg
ggaagtggcgggatcagtcagatggacctggtggggctttaccagcagctccacggcctt
ggctcgcatcaaggcatgggcaagaatcctgggccctctaaggggctgtag
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integrated database retrieval system
