Gasterosteus aculeatus (three-spined stickleback): 120818114
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Entry
120818114 CDS
T07457
Symbol
epyc
Name
(RefSeq) epiphycan
KO
K08127
epiphycan
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gat00535
]
120818114 (epyc)
Proteoglycans [BR:
gat00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
120818114 (epyc)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
120818114
NCBI-ProteinID:
XP_040030826
UniProt:
A0AAQ4S7U6
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Position
4:30976657..30987912
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AA seq
720 aa
AA seq
DB search
MRMLVRLVFGLFVLKAVVAGPRFSRQVDAYDNYDVDLDNLNLETYEYEDGLTIDDPQIEI
GTLPPPDYHYPVPEAPYEEQVEEEEEEQELPITPRLIPQGSGGSGDLMGPNTQKEVELHL
TPIDILPVPGDFGGSVGSGTSGASGTSGASGSGGSGDLLVSSGSGGSGDNILISGASEEL
VSSGGSGDIILISGASEELVSSGGSGDNMLISGASEELVSSGGSGDIILISGASEELVSS
GGSGDIILISGASEELVSSGGSGDIILISGASEELVSSGGSGDNILISGASEELVSSGGS
GDIILISGASEELVSSGGSGEFLVSGDILISGDLSGSGDISGASGDLGSGVSTEFPLGSG
ESGDQSGSGFSGDLLTSGTSGSSGLSGDSGESADSGITLLSGEEELPLISEPTPSEASGA
PEFSGASGTSGASGDLGASGELEFSGSPGASGVSGSGEKEVPEVTLVPDTEKEEGLLPVT
PETPQEGAGGVEESGSSGEPDEPEEPVIDRTGMPTCLLCTCLGGSVYCDDLKLGSVPPLP
KDTTHFYARYTESPRSTSPDFAFMNKLKRIDLTANEITSIDERAFLGLPELEELVIRENH
ISQLPALPETMSLIDASHNDIGSKGVHQEAFKDMTGLLYLYLTDNHIDYIPVPLPYSLRS
LHLQRNNIQMMHGDTFCNLKDFNYIRNALEDIRLDGNPINLSRTPQAYVCLPRIPIGNLI
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgcttgtgcggctcgtgttcggactctttgtcctcaaagcagtggtggctggt
cccagattttcccgacaggtggacgcatacgacaactatgatgtggatctagacaactta
aatttggagacctatgagtatgaagatgggcttacaattgatgatcctcagatagagatt
ggaacactgcccccacctgactatcactaccctgtgcccgaggccccatatgaagaacaa
gtagaagaggaggaagaggagcaggagttgcctataaccccccggctcatccctcagggt
tcagggggatccggggatctcatgggcccaaacacacagaaagaggtggagctgcatctg
acgcccattgacatccttcccgtgcccggtgattttgggggctccgtagggtccggaacc
tcgggggcttctgggacttctggggcttctgggtcaggaggctcaggggacctgctggtc
tccagtggctctgggggttccggtgacaatatcctgatctcgggagcctccgaggagctt
gtgagctctgggggttccggtgacattatcctgatctcgggagcctccgaggagctcgtg
agctctgggggttccggtgacaatatgctgatctcgggagcctccgaggagctcgtgagc
tctgggggttccggtgacattatcctgatctcgggagcctccgaggagctcgtgagctct
gggggttccggtgacattatcctgatctcgggagcctccgaggagcttgtgagctctggg
ggttccggtgacattatcctgatctccggagcctctgaggagcttgtgagctctgggggt
tccggggacaatatcctgatctcgggagcctccgaggagcttgtgagctctgggggttcc
ggtgacattatcctgatctccggagcctctgaagagcttgtgagctctggaggatctggg
gaattcttggtatctggggatatcctgatatctggggatctctcggggtccggggatatt
tctggagcctccggggacctcggctctggggtttccactgaattcccgctgggctccgga
gagtctggggaccagtctggttctgggttctctggagatctcttgacctcagggacctcc
ggaagctctgggctttctggggactctggtgagtctgctgactcagggataacattgtta
tctggagaggaggagctgcccctcatttctgagccgacccctagcgaggcgtcaggtgct
ccagagttctcaggagcttcaggaacctcaggggcctctggggatctcggagcctctgga
gaattagagttctctggatcccctggggcatcaggtgtctctggctctggagagaaagag
gtccctgaggtcactcttgtccctgacactgagaaagaggaggggctgcttccagtgaca
ccagaaacccctcaggagggtgctggcggtgtggaagagtcagggagctcaggggagcct
gacgagcccgaagagcctgtgattgaccggacaggtatgcccacgtgcctgctgtgcaca
tgcctcggcggttcggtctactgcgatgacttgaagctagggagtgttccgcctcttccc
aaagataccactcatttctacgcccgctacaccgaatcaccaagatcaacaagtcctgac
ttcgccttcatgaataagctgaagaggatcgacctgaccgccaacgagataacgtccatc
gacgagagggcctttttgggtctgcccgagctggaggagctggtgattcgagagaaccac
atctcacagctgcccgccctcccggagacaatgagcctgatcgacgccagccacaatgac
atcggcagcaagggcgtccaccaagaggcgttcaaagacatgacgggcctgctgtacctg
tacctaacggacaaccacatcgattacatccctgtgcctctaccgtacagcctaaggtct
ctacacctacagcgtaacaacattcaaatgatgcacggggacacattctgcaacctgaaa
gatttcaactacatcaggaacgcactggaggacatccgtctggacggcaaccccatcaac
ctcagcaggaccccgcaggcctacgtgtgcctgccccggatccccatcgggaacctcatt
taa
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