Gasterosteus aculeatus (three-spined stickleback): 120818123
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Entry
120818123 CDS
T07457
Symbol
hars
Name
(RefSeq) histidine--tRNA ligase isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120818123 (hars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gat01007
]
120818123 (hars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gat03016
]
120818123 (hars)
Enzymes [BR:
gat01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
120818123 (hars)
Amino acid related enzymes [BR:
gat01007
]
Aminoacyl-tRNA synthetase
Class II (A)
120818123 (hars)
Transfer RNA biogenesis [BR:
gat03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120818123 (hars)
Prokaryotic type
120818123 (hars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
WHEP-TRS
tRNA-synt_2
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
120818123
NCBI-ProteinID:
XP_040030844
UniProt:
A0AAQ4QFV3
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All DBs
Position
IV:19793226..19802890
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AA seq
520 aa
AA seq
DB search
MLGMFCVRTCSGLMGLRAAPRVRSLHSFPGITVAQIDEEVAKLLALKAQIGGDNVKHQFV
LKTAKGTRDYNPKQMAIRERVFSTIIGCFKRHGAETIDTPVFELKETLTGKYGEDSKLIY
DLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCD
FDIAGQYDAMIPDAECLKIVHDILSELDLGDFRIKVNDRRILDGMFAVCGVPDDKFRTIC
STVDKLDKMPWEDVRKEMVTEKGLSEEAADQIGEYVSLQGGMELAERLLQDQKMCRSKQA
CAGLSDIKLLFSYLQLFQVTDKVVFDLSLARGLDYYTGIIYEGVLTQAGVAPGSTEAQNG
TPAEESVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSILEQKAEASAEKVR
TTEVQVMVASAQKNLLEERLRLLTELWNAGIKAEVMYKKNPKLLSQLQHCEESGIPLVAI
LGEQELKDGVVKLRVVASREEVDVSRAALVDEIRRRTSQA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcatgttttgtgttcgtacttgttctggtctgatgggccttcgggctgcaccg
cgtgtccgatcactgcattctttccctgggatcactgtggctcagatcgatgaagaggta
gccaaactgctggcgctgaaggcccagataggaggagacaatgtcaaacatcagtttgtc
ctcaagacggcaaagggaaccagggactacaaccccaagcagatggccatcagagagcga
gtcttcagcactatcatcggctgcttcaaacgccacggagcagaaaccatcgacacacct
gtttttgagctgaaggaaacgttgacgggaaaatatggagaagattccaagctcatctat
gacctgaaagaccaaggaggagagttgctgtcgctccgatatgacctgaccgtgcctttt
gcccgctacctggcaatgaacaagataaccaacatcaagcggtaccacatcgctaaggtc
taccgccgcgacaacccggccatgacccgtggccgctaccgggagttctaccagtgtgac
tttgacatagcagggcagtatgacgccatgattcctgatgcagagtgtctgaagattgtc
catgacatccttagtgagctggacctgggagacttccggatcaaggtcaacgacagacgc
attcttgatggaatgttcgctgtgtgtggtgtgccagatgacaagttccgcaccatctgt
tcgaccgtggataaactggacaagatgccctgggaggacgtgagaaaggagatggtgact
gagaagggcctgtcagaggaggcagccgatcagattggggagtacgtcagtttacaaggt
ggaatggagttagcagagcgcctcctccaggaccagaagatgtgccggagcaagcaggcc
tgtgccggcctgtccgacatcaagctgctcttcagctacttgcagctcttccaggtcaca
gacaaggtggtgtttgacctcagtctggctcggggtctggactactacacagggatcatt
tatgagggtgtgctgactcaggcgggtgtggcccccgggtccactgaagcccaaaatggg
acgcccgcagaggagagtgtgagcgtgggcagcgtggccggcggcggtcgatacgacggc
ctggtgggcatgtttgaccccaagggcaggaaggtgccgtgtgtgggcgtcagcatcggc
atcgagaggatcttctccatcttggagcagaaggcggaggcctcagcagagaaggtccgt
accacggaggttcaggtcatggtggcgtctgctcagaagaacctgttggaggaaagactc
cgacttctcaccgagctctggaatgctggcatcaaggctgaggtgatgtacaagaaaaac
cccaaactgctgagtcagctgcagcactgcgaggagtccgggatccccttggtagccatc
ctgggagaacaggagctcaaggatggagtggtgaagctccgcgtcgtggcatccagagag
gaggtggacgtctctagagcagctcttgtcgatgagatccggaggaggacctctcaggcc
tag
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