Gasterosteus aculeatus (three-spined stickleback): 120818127
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Entry
120818127 CDS
T07457
Name
(RefSeq) short transient receptor potential channel 7-like
KO
K04970
transient receptor potential cation channel subfamily C member 7
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120818127
Ion channels [BR:
gat04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120818127
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank_4
Ank
Motif
Other DBs
NCBI-GeneID:
120818127
NCBI-ProteinID:
XP_040030854
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Position
IV:9672030..9707881
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AA seq
1008 aa
AA seq
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MFDEGDGTDSGERAPPPESPPPPLPVCLPRGSPPSPRPLDLFSAASPLLGDTDPPYPATP
ECLHPSPESRETGDFPHSTPAKLCPSIGEGGSPFLSRQDVSMDAVFDRCDDLFPKWRGRG
AATSDRLQHRGQRIPRAPQGLDLGNHSVEPADTEFDSETRQTMEAMHRRHTTLREKGRRQ
AVRGPAYMFNERGSALTAEEERFLDAAEYGNIPVVRKMLEESKTLNFNCVDYMGQNALQL
AVGNEHLEVTELLLKKDGLARIGDGLLLAISKGYVRIVEAILAHSAFGGGLRLALSPLEQ
EMRDDDFYAYDEDGTRFSHDVTPIILAAHCLEYEIVHILLTKGARIERPHDYFCNCLECM
EKQKQDAFSHSRSRMNAYKALASASYLSLSSEDPVLTALELSNELARLANIETEFKNEYR
KLSMQCKDFVVGVLDLCRNTEEVEAILNGDVDQCPPSAYNRPCLSRVILAIKYEVKKFVA
HPNCQQQLLTIWYENLPGLRQQSVGVKCWTVLGVAAGLPFLAVAYWIMPCSKLGQILRSP
FMKFVAHAVSFTIFLGLLIVNASDRFEGVKNLPNETITDHPRQVFRVKTTQFSWTEMLIM
KWVLGMIWSECKEIWTDGPREYIMHLWNVLDFGMLSIFVASFTARFMAFLKASKAQQYVD
LHVPDEDLSNASLPDEVAYFTFARNKWRPSDPQIISEGLYAIAVVLSFSRIAYILPANES
FGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYLGAKYNPAFTTVEESFKTLF
WSIFGLSEVISVVLKYDHKFIENIGYVLYGVYNVTMVVVLLNMLIAMINSSYQEIEEDAD
VEWKFARAKLWLSYFDEGRTLPAPFNMVPSPKSFYYLVLRIKSCLIRLCKANSRHHNNEL
ELGMLNSQTKDERLRTFPRPGEEFIPRKPREHPTRYQNIMKRLTKRYVLKAQVDRESDEV
NEGELKEIKQDISSLRYELLEEKSDAAGELGLLIQQLGDKFGKTTARH
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgaaggtgacggaaccgacagcggcgagcgagcccctccgcccgagtctccc
ccgccgcctctgcccgtctgtcttccccgaggatctcctccttcaccgcggcccctggac
ctcttttccgccgcctctccgctgctgggtgacacagacccgccttaccccgccactcca
gagtgtctccacccgtctccagagagcagggagaccggggacttcccgcactctacgccc
gcaaagttatgcccgagcatcggggagggcggctctccgttcctatcgcggcaggatgtg
agcatggacgcggtgttcgaccgctgcgatgacctgttccccaagtggagaggacgaggc
gcggcaacctccgaccgccttcagcaccgcggacagagaatcccgcgggctccgcagggc
ttggacctcgggaatcactccgtcgagcccgccgacaccgagttcgactctgaaaccagg
caaacgatggaagccatgcatcgccggcacaccacactgagagagaaggggcgtcggcag
gcagtgcggggcccagcctacatgttcaatgaacgtggctcagccctcactgcagaggag
gagcgctttctggacgctgccgaatacggaaacattcctgtggtgcgcaaaatgctggaa
gagtccaaaacccttaacttcaattgtgtggactacatgggccagaatgccttgcagctg
gcagtgggcaatgagcaccttgaagtgaccgagctgcttctaaaaaaggatggcttggca
aggatcggcgatgggttgctcttggctatctccaagggttatgtccgaattgttgaggcc
attctcgcccactcggcttttggcggaggtctccgactggctttgagccctctggagcag
gagatgcgtgacgatgacttttacgcatacgacgaagacggaacccgtttttcacacgat
gtcacgccgatcatcctggccgctcactgtctagagtatgagattgtccacatccttctg
acgaagggggcccgcattgaaaggccacatgactacttctgtaattgtctagaatgcatg
gagaaacagaagcaagacgcattcagtcactctcgctccaggatgaatgcatacaaagcg
ctggccagtgcttcttacctgtcactcagcagcgaagaccctgtgctgaccgccctggag
ctcagcaatgaactggcaagattggccaacatcgagacagaattcaagaatgagtaccgt
aagctgtccatgcagtgcaaggactttgtggtgggtgtgttggacctttgtcggaacaca
gaggaagtggaggccatcctgaacggcgacgtggaccagtgccctccgagtgcgtacaac
cgaccctgcctcagccgcgtcatactcgccatcaagtacgaggtcaagaagttcgtcgcc
catcccaactgtcagcagcagctgctgacgatctggtacgagaacctgcccggcctgagg
cagcagtccgttggggtgaagtgctggacggtgctgggggtggccgcaggtctgcccttc
ctggctgttgcctactggataatgccatgtagcaagcttggtcagatcctgcgaagtccc
ttcatgaagtttgtggctcacgccgtctccttcaccatctttttgggtcttcttattgtc
aacgcctccgaccgctttgagggcgtgaagaacctgcccaacgagaccatcacagaccac
ccacgacaggtgttcagggtaaagaccacccagttctcctggacagagatgctgatcatg
aagtgggtgttggggatgatttggtcagaatgtaaggagatctggaccgacgggcccaga
gagtacatcatgcacctgtggaatgtgctggactttggcatgttgtctatctttgtggct
tccttcacggcgcgcttcatggcgttcctcaaggcgtccaaagcccagcagtatgtggac
ctgcacgtaccagacgaagaccttagcaacgcctcgctgcctgacgaagtcgcctacttc
acttttgccaggaacaagtggcgcccctcagacccccagatcatctcagaaggcctgtac
gccatcgccgtggtgctgagcttctcccgcatcgcctacatcctgccggcaaacgagagc
ttcggcccattgcagatttcactggggcgcacagtcaaagatatcttcaagttcatggtc
atcttcatcatggtgtttgtggccttcatgattggcatgttcaacctgtactcgtactac
ctgggagccaagtacaatcctgcattcaccacggtggaggagagttttaagacccttttc
tggtcgatctttgggctgtctgaagtgatctccgtggtgctgaagtacgaccataaattc
atagagaacatcggctacgtgctgtacggagtctataatgtcacgatggtggtcgtcctc
ctcaacatgctcattgccatgatcaacagctcgtaccaggagatagaggaggacgccgac
gtagagtggaagtttgcccgagccaagctgtggctctcctactttgacgagggccgcacg
ctgcccgcccccttcaacatggttcccagcccaaagtccttctactacctggtgctccgc
atcaagtcctgtctgatacgcctgtgcaaggccaacagccgtcaccataacaacgagctg
gagctgggcatgctcaactcacagaccaaggatgaacgcctcaggacttttccacgcccg
ggagaagagttcatccccagaaaaccgagagaacacccgaccagataccagaatatcatg
aaacgcctgactaagaggtacgtgctgaaggcccaagtggacagagagagcgacgaagtc
aatgaaggtgagctgaaggagatcaaacaagacatttccagcctccgttatgagctcctg
gaggagaagtccgatgccgccggagagctgggtctactcatccaacaacttggcgacaag
tttggcaagaccaccgcgagacactga
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