Gasterosteus aculeatus (three-spined stickleback): 120818151
Help
Entry
120818151 CDS
T07457
Name
(RefSeq) high affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120818151
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gat02000
]
120818151
Transporters [BR:
gat02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
120818151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
120818151
NCBI-ProteinID:
XP_040030934
LinkDB
All DBs
Position
IV:28603094..28607223
Genome browser
AA seq
544 aa
AA seq
DB search
MAVNWPGLLSLCVFYMMILAMGIWASRKSKREEKKCTGNRSEVTMVGGRNLNIWVSICTM
TATWVGGGYILGNAEVVYDPTKGLVWATGPLAFFMNLVLGALFFVKPIRSKNYVTLMDPF
QEKYGDKVAAVLFIPALLGDILWVACILGALGGTISVVMDISSALAVCVSAAVAIVYTLM
GGLYAVAYTDVVQLSLMLVGLWLCVPFILANPSSANITVAAVTKLHQEPWLGSLELEEAG
RWVDDLLLLAIGGICYQAFYQRVLSTATDAQSKLTCYVAAVLCPILAIPSLIIGAAAAST
NWNETSYGSPGPYQQGKAGMILPIALQHLCPFYVSLIGMGALAASVMSSVDSALLSVASQ
LGRNIFKNVIYKGASEKLILAVVKGSIFLCGTIGAGLAMTTKSVYLLWIVSADVLYSMLA
PQVICIFYLSRRVNHYGACAGFVLSLLLRALVGEPLIGLPDILPLPWDKTVDGHRYRLLP
FRTAIVLVTMATVLVVSRLASWLSEKGLLARASDAEADTAMKYTAPVGTHEEEAERKSSL
TVRT
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcggttaactggccaggactgctgtccttatgcgtgttttacatgatgatactggcc
atgggtatctgggcatccaggaagtccaaacgcgaggagaagaaatgcactggcaaccgc
agtgaagttacaatggttggggggcggaacctaaacatctgggtcagcatatgcaccatg
acagccacttgggtgggaggaggctatatattgggtaatgctgaagtggtctatgatcca
acaaaggggttggtgtgggccactggacccctcgcctttttcatgaacttagttttaggt
gcactcttctttgtcaaacccattcggtcaaagaattatgtcaccctgatggacccattt
caggagaaatacggcgacaaagtagcggctgttctcttcattcccgctctcctcggcgat
atcttgtgggtagcatgtatccttggtgcgttgggagggacgataagcgtggtcatggat
atctcctccgcgctcgccgtgtgcgtctccgccgctgtggctatcgtctacacgttaatg
ggaggactctacgctgtggcctacactgacgtcgtccagcttagcttgatgctagttgga
ttgtggctctgcgtgcctttcatattggcgaacccctcctctgccaacatcacggtagct
gcagtgaccaagctgcaccaggagccgtggctcggcagcctggagctggaagaagcaggt
cgctgggtagatgacctactgcttttggcaatcggtgggatctgctaccaggctttctac
cagagagtcctgtccactgccactgatgcgcaatcaaaactcacctgctatgttgcagca
gttctatgcccaattcttgccatcccgtcactcatcattggggcagcagctgcatctaca
aattggaacgagaccagctacggctcccccggcccgtaccaacaaggcaaagccggcatg
atcttgccaatcgcccttcagcatctttgcccattttacgtctcgctgatcggcatggga
gcgcttgctgcgtctgtgatgtcatcggttgactctgcccttctgtctgtcgcctcccaa
ctgggccgaaatatcttcaagaatgtcatctacaaaggggcctcggagaaactgatcctt
gccgtggtcaaagggtcaatcttcctttgtggaacaataggagcaggtctggccatgaca
acaaagtccgtttacctgctctggatcgtcagtgcggacgtcctttattcaatgctggct
ccccaggtgatctgcatcttctacttgtcccggcgggtgaaccactacggcgcctgtgcc
ggctttgtgttgtccctcctgctgcgggctctggtgggggaaccgctgataggccttccc
gacatcctgcccctgccgtgggacaagacggtggacgggcaccggtaccgcctgctcccc
ttccgcactgcaatcgtgctcgtcaccatggcgactgttttggtggtctcgcgccttgcc
tcgtggttgtctgagaaggggctgctggcgagagcaagtgacgcagaagccgacacggcc
atgaagtacacggcgccggtcggaacgcacgaggaggaggccgagagaaaatcctcactg
accgtgaggacatga
DBGET
integrated database retrieval system
