Gasterosteus aculeatus (three-spined stickleback): 120818176
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Entry
120818176 CDS
T07457
Symbol
pdgfc
Name
(RefSeq) LOW QUALITY PROTEIN: platelet-derived growth factor C
KO
K05450
platelet derived growth factor C/D
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04010
MAPK signaling pathway
gat04020
Calcium signaling pathway
gat04510
Focal adhesion
gat04540
Gap junction
gat04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120818176 (pdgfc)
04020 Calcium signaling pathway
120818176 (pdgfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120818176 (pdgfc)
04540 Gap junction
120818176 (pdgfc)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120818176 (pdgfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
gat04052
]
120818176 (pdgfc)
Cytokines and neuropeptides [BR:
gat04052
]
Cytokines
Growth factors (RTK binding)
120818176 (pdgfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
120818176
NCBI-ProteinID:
XP_040030977
LinkDB
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Position
IV:complement(2236388..2269745)
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AA seq
410 aa
AA seq
DB search
MRICLDLGRYNFHFFPRRTDKDYVDSTLPLPSPNVSETALVSRKRRTCVVIQTILSTALC
DRQPPXIQMILPFIFLLASLLQQYGTEAESSHVSKFQPPSVKEQNGVQDSHQEKIITVSG
EGMLQSPGFPLTYPRNTALVWRLVATNNMRIQLTFDERFGLEDPEDGTCKYDFVEIEDPT
ESGVLGRWCGSQSPPASHSSKGSQIRIRFVSDEYFPSEPGFCIRYSLLPASVSEIKVPAV
PPQSQQGLEEVSEAVASLGTVEEVMKYLEPERWQLDMEELYKPTWHLLGKSFIHNKKARG
GADLNLLREEVQLYSCTPRNFSVSLREELKRTDAIFWPSCLLVKRCGGNCACCSHRCYDC
QCVPSRVTKKYHEVLQLKHRSGGRSLQKTMTDVPLEHHEECACVCKDDSD
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcggatttgtcttgatttagggagatataactttcacttttttcccagaaggactgat
aaagattatgtggattctactctgcctttaccctctccaaatgtgtccgaaacagcactg
gtgtcccgtaaacgacgcacgtgcgtggtgatacaaaccatcctgtcaacagcgctttgt
gatcgccaaccaccantcatccaaatgatccttccattcatattcctccttgcatcgctt
ctccaacaatatggcacggaagctgaatcaagtcacgtcagcaagtttcagcccccaagt
gtaaaagagcaaaacggagtgcaagattcccatcaggagaagatcattacagtgtccgga
gagggaatgctccagagcccaggcttcccactaacttaccccaggaatactgcgttggtc
tggagactagtggcgaccaacaatatgaggatccagctcaccttcgatgagcggtttggt
ctggaggacccagaagatggcacatgcaagtacgactttgtggagatagaggacccgacc
gagagcggcgtcctgggtcgctggtgcggctcgcagtcgccaccagctagtcactcgtct
aaaggcagtcagatcaggatccgcttcgtctccgacgagtacttcccgtccgagccgggc
ttctgcatccgctactcccttctccccgcgagcgtatcggaaatcaaagtgcctgcagtt
cccccccagtcccagcagggcctggaggaggtgtcggaggctgtggcgagcctgggcacc
gtggaggaggtcatgaagtacctggagcccgagcgatggcaactggatatggaggagttg
tacaagcctacgtggcatttgctgggaaaatccttcatccacaataagaaagcaagagga
ggagctgatctcaacctgctgagggaggaagtccagctgtacagctgcactccacgcaac
ttctccgtgtccttgcgtgaggagctgaagaggaccgatgccattttctggccgagctgc
ctcctggtgaaacgctgcggtggaaactgcgcctgctgctctcaccgctgctacgactgc
cagtgcgttcccagcagggtgaccaagaagtaccatgaggttttgcagctgaaacaccga
agtggtggcagaagcttgcagaagaccatgactgatgtgcccttggagcatcacgaggag
tgtgcctgtgtgtgcaaagatgactcggactga
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