Gasterosteus aculeatus (three-spined stickleback): 120818229
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Entry
120818229 CDS
T07457
Symbol
si:ch211-114c17.1
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gat03041
]
120818229 (si:ch211-114c17.1)
Spliceosome [BR:
gat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120818229 (si:ch211-114c17.1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_11
TPR_16
TPR_MalT
TPR_12
HrpB1_HrpK
DUF4042
Motif
Other DBs
NCBI-GeneID:
120818229
NCBI-ProteinID:
XP_040031075
UniProt:
A0AAQ4NT28
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All DBs
Position
IV:8194674..8203340
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AA seq
738 aa
AA seq
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MAAEGYEEMSGNGELEESSATEASEAAASPRAEMAEMSEENGGPAVAPDVSVRPDPVSFS
MPPPAEDDEGELPADFERLWKAAHDNPQDFTGWTDLLQYCEQESHITASRRALAAFLTRY
PLCYGYWKKFADLERRAGFNNKAEEVCVQGLQAIPLSVDLWIHYINLLLGTLDMNLPESP
SRIRSVFEDAVVAAGLDFHSDRLWDLYVEWEKEQGNMKRAVAVLDRVLKVPTQLYNTHYD
KFKDQLNGQEPEEVLSTEEYEELRTLCRQTQKAERAKQAQEEEEEERPPGEEEPATPEGT
DSEELMQKIREQVLLRRDKVYQDNEGEVRKRWHFEDAIKRPYFHVKPLDRLQLRAWHSYL
DWEVAELNKDPKDPQDSQDPQQDPDQAATEEPEVTVQPQVDSEGAAVAHDDTRVRILFER
CLIACALYEEFWIRYNQYLESQSLEEARAVFKRACEVHLAYKPNIHMQWATFEERHGDLS
EARRVLEALEKTLPGLAVVRLRRAALERRAGLLDQSEALLREAVDESKENPTLHAFFSIK
LARLLLKLGRNPSRARGVLQEALEISPDNDKLHLNLLELEVSGDPSAEAVQECVTRALAA
ALAPHTKILFSQRRLQFAEDYSNSIASVLSVYEEHQKLLKQLGGTKRGAENGDEDSEKMS
KSDDGSAVAVSAEVAATMAHVPITTPPPPVVGADASSQAAYGGYSSWYQQPQYGSYGSYG
NYGYQNTWNYNQGYYPPS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaaggctatgaggagatgagcggcaacggggagctcgaagagtcttcagcc
acggaggcctctgaggccgccgcatcgcctcgagccgaaatggcagagatgtcggaagag
aacggcggtcccgccgtggcccccgacgtctctgtgcgccccgaccccgtttccttctcc
atgcccccacctgcggaagacgacgagggggaactgcccgcggactttgagcgcctgtgg
aaggccgcccacgacaatcctcaagacttcaccggctggacggacctgcttcaatactgc
gagcaagagagtcacatcacggcgtcgcgcagagcgctggcggctttcctcactcgctac
ccgctctgctacggctactggaagaaatttgccgatctggaacgccgcgctgggttcaac
aacaaagcagaggaggtgtgtgtccagggtctacaggcaatcccgctgagtgtagatctg
tggatccactacatcaatctgctgctgggaacactggacatgaacctccctgagtcgccc
tcgaggattcgcagtgtgtttgaggacgcggttgtggcagcaggtctggacttccactcc
gacaggctgtgggatctttatgtcgagtgggaaaaggagcaggggaacatgaagagagcc
gtagcagtcctggacagagtcctcaaagtccccacccagctctacaacacccactacgac
aagttcaaagaccaactcaacggccaggagcctgaagaggtgctttccacagaggaatat
gaggagctgaggacgctgtgccgtcagactcagaaagcggagcgtgccaaacaggcccag
gaggaggaggaggaggagcggccgccaggggaggaagagcccgccacaccggagggcacc
gactcggaggaattgatgcagaagattagggaacaagtgctgcttcgcagggacaaagtg
taccaagacaacgagggagaggtccgcaagcgttggcactttgaagacgctatcaaacgt
ccttacttccacgtcaagcccctggatcgcctccaactgagggcctggcactcctacctg
gactgggaggtcgccgagctgaacaaggaccccaaagacccccaagactcccaagacccc
caacaagatccagaccaggctgccacagaggagccggaggtcacagtccagccacaggtt
gactcagagggggctgcggttgcccatgacgacaccagggtgcgcattctcttcgagcgt
tgcctgattgcctgcgccctgtatgaggaattctggatcaggtacaaccagtacctggag
tcgcagagtttggaggaggcgcgcgctgtcttcaaacgggcctgtgaggtccacctggcg
tacaaacccaacatccacatgcagtgggccaccttcgaggagaggcacggggacctgagc
gaggcccggcgggtgctggaggctctggagaaaacgctcccgggattggcggtcgtccga
cttcgcagggcggctctagagaggcgggcgggcctgctggaccaatcggaggcgctgctg
cgtgaggcggtggacgaatccaaagagaatcccacgttgcacgctttcttttccatcaag
ctggcacggctgctgctgaagctgggcaggaaccccagcagagcccgcggagtcttacag
gaggcgctggagatcagcccggacaacgataagctgcacctgaacctgttggagctggag
gtgtcgggcgacccctcagcggaggcggtgcaggagtgtgtgacgcgagcgctggcagct
gccctcgccccccacaccaagatcctcttctcccagagacgcctgcagtttgcggaggac
tacagcaactctattgcgagtgtgctgtcggtctacgaggagcaccagaagctgctgaag
cagttgggcggaacgaagagaggagcagagaacggggatgaggactcggagaagatgagc
aaaagtgacgacggctcggctgttgccgtgtctgcagaagtggcagcgacgatggcgcat
gtccccatcacgacgccgcctcctcctgtggtgggcgccgacgccagctcacaggccgcc
tatgggggatacagcagctggtaccagcagccgcaatacggcagctacggaagctacggc
aactacggttaccagaacacctggaactacaaccaaggctactatccccccagctag
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