Gasterosteus aculeatus (three-spined stickleback): 120818344
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Entry
120818344 CDS
T07457
Symbol
smo
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120818344 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
gat04030
]
120818344 (smo)
G protein-coupled receptors [BR:
gat04030
]
Frizzled / Smoothened family
120818344 (smo)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
DUF6312
Motif
Other DBs
NCBI-GeneID:
120818344
NCBI-ProteinID:
XP_040031287
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Position
IV:29406293..29413629
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AA seq
826 aa
AA seq
DB search
MSSQARRGPIVGVCGMLCVWAAWLSGSAAALSPNGTAFVDHCKKHSTCEALKYNTCLGSP
LPYTHTSLALAEDSGTQEEAFEKLTMWSGLRNAPRCWSVIQPLLCAIYMPKCENGRVELP
SQSLCLATRGPCSIVDQERGWPGFLKCDKFPQGCSNEVQKLKFNMSGQCEAPLVKTDIQS
SWYKDVEGCGIQCDNPLFTEEEHNDMHAYIAYFGTITLLCTFFTLATFLADWKNSNRYPA
VILFYINACFFVGSIGWLAQFLDGARDEIVCKSDNTMRLGEPSSSETLSCVTIFIIVYYS
LMSGVIWFVMLTYAWHTSFKALGTTQQPLSGRTSYFHMVTWSIPFVLTVAILAIAEVDGD
SVSGICFVGYKNYRYRAGFVLAPIGVVLVVGGYFLIRGVMTLFSIKSNHPGLLSEKAASK
IKETMLRLGIFGFLAFGFVFITFGCHFYDFFNQAEWERSFREYVLCEANVTIASQTNKPI
PECTIKNRPSLMVEKINLFSMFGTGIAMSTWVWTKATILIWRRTWCKIIGRSDNEPKRIK
KSKMIAKAFALRKELHKDPEKELSFSMHTVSHEGPVAGINFELNEPSNDMSSAWAQHVTK
MVARRGAILPQDISVTPTGTPVPPPDERNRLWMVEAEISPEMIKRKKKKKKRKKDVRPSE
EAVEHHGYAQREFGRSSVPRLPKLPCHPSLVANLREHQRQQQTLEEEEVLPGSYPDTRPS
HSVSREQRRPHPSYQSGRRSYGHGHPPAYSDRPEDLGLGPRCLPSASTWQPSEPSSYPGE
TDLADGLSERLAHVARVPAGRRAGYGPIHSRTNLMEAELMDADSDF
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccaggctcggcggggccccattgttggagtgtgcgggatgctgtgcgtctgg
gcagcctggctctcgggctccgcggcggcgttgtcgccgaacggcaccgcgttcgtggac
cactgcaagaaacactcgacgtgcgaggcgctcaagtacaacacatgcctcggatcgccg
ttaccgtacacgcacacctccctggccctggccgaggactccggcacccaggaggaggct
tttgagaagttgaccatgtggtccggtctgcggaacgctccccgctgttggtccgtcatc
cagcctctgctctgtgccatctacatgcccaaatgtgagaacggtcgggtggagctgccc
agccagagcctgtgcttggctacgcgtggaccatgtagcatcgtggaccaggaaaggggc
tggcccggcttcctcaagtgtgacaaattcccccagggctgttcgaacgaggtgcagaag
ctgaagttcaacatgtcgggccagtgcgaggctcccctggtgaagacggacatccagtcc
agctggtacaaggacgtggagggctgcggcatccagtgtgacaacccgctgttcaccgag
gaggagcacaacgacatgcacgcctacatcgcctactttggcaccattaccctcctgtgc
accttcttcaccctggcgacgtttctcgccgactggaagaactccaatcgctacccggcc
gtcattctcttctacatcaacgcctgtttcttcgtgggcagcataggctggctggcccaa
ttcctggacggagcacgcgacgagatcgtgtgcaagagcgacaacaccatgcgactcggg
gagccgtcgtcttcggagacgctgtcgtgcgtcaccatcttcatcatcgtgtactactcc
ctgatgtcgggcgtgatctggttcgtcatgctgacctacgcctggcacacgtccttcaaa
gccctggggaccacgcaacagccgctgtccggcaggacctcctacttccacatggtcacc
tggtccattccctttgtcctgaccgtggccatcctggccatcgccgaggtggacggagac
tcagtcagcgggatctgtttcgtcggatacaagaactacagataccgtgccgggttcgtg
cttgcccccatcggggtggtgcttgtcgtcggaggctacttcctcatccggggcgtcatg
actttgttttccattaagagcaaccaccccgggctgctgagtgagaaagctgccagtaaa
atcaaagagacgatgctgagacttggtatttttggattcctcgctttcggctttgtcttc
atcaccttcggctgccacttctacgacttcttcaaccaggccgaatgggagaggagcttc
agagaatacgtgctgtgcgaagccaacgtgacaatcgcctctcagaccaacaagccgatc
ccagaatgcaccattaagaaccggcccagcctaatggtggaaaagatcaacctgttctcc
atgttcgggaccggtattgctatgagtacctgggtctggaccaaggccactatcctcatc
tggagacggacctggtgcaagattattggccgcagtgacaatgaacccaagaggatcaag
aagagcaagatgattgccaaggcgtttgcgttgaggaaggaacttcacaaggacccagag
aaggagctgtctttcagcatgcacaccgtgtcccacgaaggacccgtggccggaatcaat
tttgagctgaatgagccatcgaatgacatgtcgtcggcctgggcgcagcatgtgaccaag
atggtggccaggcgaggtgccatcctgcctcaggacatctctgttacccccactggtacc
ccagtgccacctccagacgagaggaacagactgtggatggtggaggcggagatctcgcca
gagatgataaagaggaaaaagaagaagaagaagaggaagaaggacgttcgtccgtcggag
gaagcggtggaacaccatggctatgctcagcgcgagttcggccgcagctcggtgcctcgc
ctgcccaaattgccgtgccaccccagcctggtcgcaaacctgcgggagcatcagaggcaa
cagcagacgctggaggaggaggaggtcctgccagggtcctacccggacacccgaccctcc
cactccgtgtcccgcgagcagaggcgcccccatccctcgtaccagagcggccggcgcagc
tacggccacggccaccctccggcctacagcgaccgcccagaagatctgggtctcggcccg
cgctgcctcccctcagcctccacctggcagcccagcgaaccttccagctacccgggggag
acagacctcgccgacgggctgtcagagaggttggcccacgtggctcgggtgccggctgga
cgcagggcaggctatggacccattcactctcggaccaatttaatggaagcggagcttatg
gacgccgactctgacttctaa
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