Gasterosteus aculeatus (three-spined stickleback): 120818403
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Entry
120818403 CDS
T07457
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120818403 (ddx4)
Enzymes [BR:
gat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120818403 (ddx4)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Gene silencing
piRNA pathway
120818403 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120818403
NCBI-ProteinID:
XP_040031378
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All DBs
Position
I:complement(20959536..20966849)
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AA seq
630 aa
AA seq
DB search
MMDEWDEAETTASTNAATSHTSSDGGLWNKEIGDFGRGRGGRGRQGGFQNSFSGGEETTN
DGNSWNSRAGESGASRGRSRGRDDRVHEYGFRGGRGGGEGFRRGGGGDGDQGARGAFRGG
YRGRDEEILTHGGADESEKRDDTDGERPKVTYVPPTLPEDEDSIFAHYEKGINFDKYDDI
LVDVSGSNPPQAIMTFEEAALCGTLRKNVNKSGYIKPTPVQKHGIPIISAGRDLMACAQT
GSGKTAAFLLPILQQLMANGTAASSFSEQQEPDAIIVAPTRELINQIYLEARKFAFGTCV
RPVVVYGGVSTGHQIRDLLKGCNVLCGTPGRLMDVIGKGKVGLAKLRYLVMDEADRMLDM
GFEPEMRRLVGSPGMPSRENRQTLMFSATYPEDIQRLAADFLKTDYLFLAVGVVGGACSD
VEQTFIQVTKFSKREQLLDLLKTTGTARTMVFVGTKRQADFIATYLCQEKVLTTSIHGDR
EQREREQALADFRIGKCHVLVATSVAARGLDIPDVQHVVNFDLPNNIDEYVHRIGRTGRC
GNTGRAVSFYDPCADNQLARSLVTILSKAQQEVPSWLEESAFSGTGSGSFQPPRERFAST
DSRKGGSFKDMAAWSQPAALGVNDEDDAWE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgagtgggatgaagcggaaactactgctagtaccaatgcagcaaccagtcac
acctccagtgatggaggcctgtggaacaaagagattggcgactttggaagaggtcgtggt
ggaagaggcagacaaggaggatttcaaaactcattttcaggtggtgaagagactacgaat
gatgggaacagctggaacagtagagctggagaaagcggtgcttccaggggcagatccaga
ggcagagatgacagagttcatgagtacgggtttagaggaggaagaggcggcggagaaggt
ttcagacgaggtggtggtggtgacggtgaccagggtgcaagaggcgcctttagaggaggc
taccgtgggagagatgaggagatcttaacacatgggggagctgacgaatcagaaaagagg
gatgacacggatggtgaaagaccaaaggtcacttatgtccccccaacactccctgaagat
gaagactccatctttgcccactatgagaaaggcatcaactttgacaagtatgatgacatt
ctggtggacgtcagtggatccaacccaccgcaggctatcatgacttttgaagaggcagcg
ttatgcgggaccctgagaaaaaatgtcaacaagtctggttacatcaagccgaccccggtg
cagaaacatggcatcccaattatctctgctggcagagacctcatggcttgtgcccagact
gggtctggtaaaacggctgccttcctgctccctattttgcagcagctaatggccaatggc
actgcagccagctcattcagtgagcagcaggagcctgacgccatcattgtggccccaaca
agggagctcatcaaccaaatctacctggaggccaggaagtttgcctttgggacatgtgtg
cgcccagtagtggtctatggtggagtcagcactgggcaccaaataagagacctcttaaaa
gggtgcaatgtgctgtgtggaacaccgggtagactgatggacgtaataggaaaaggaaag
gtcgggttggccaagctgcggtacttggtgatggacgaggctgaccggatgttggatatg
ggatttgagcctgaaatgcgtcgcttggtgggctcccctggaatgccgtccagagagaat
cggcagactcttatgttcagtgccacctaccctgaggacattcaacggttggcggctgac
ttcctcaagactgattatttgttcttggctgtgggtgtggtgggcggagcatgcagtgac
gttgagcaaacgtttattcaagtcacaaagttctcaaagagggaacaactccttgacctt
ctcaagaccacagggacggcgcgcaccatggtctttgtggggaccaagagacaagcggat
ttcattgccacttacttatgccaggagaaagtcctaaccaccagcatccatggggaccgt
gagcagcgagagcgagaacaggctctggcagacttccgcattggaaaatgtcacgtcttg
gtggcaacctccgtagcagcccgtggactggacattccagatgtgcagcatgtggtgaac
tttgacctccccaacaacattgacgaatacgtccaccgcattgggcgaactggccgctgt
gggaacactgggagggctgtgtcattctatgatccttgtgctgacaaccagttggcccgc
tccctcgtcacaatcctctctaaggcccagcaggaagtgccctcctggctagaggagtct
gccttcagcggcactggaagcggtagcttccagccgcccagggagcgctttgcctccaca
gactccaggaagggagggtctttcaaggatatggctgcatggagccagccggctgccctg
ggtgtaaatgatgaagatgatgcctgggaataa
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