Gasterosteus aculeatus (three-spined stickleback): 120818411
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Entry
120818411 CDS
T07457
Symbol
eri1
Name
(RefSeq) 3'-5' exoribonuclease 1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120818411 (eri1)
03036 Chromosome and associated proteins [BR:
gat03036
]
120818411 (eri1)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120818411 (eri1)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
120818411 (eri1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
Pox_D5
Motif
Other DBs
NCBI-GeneID:
120818411
NCBI-ProteinID:
XP_040031385
LinkDB
All DBs
Position
IV:32717414..32720232
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AA seq
342 aa
AA seq
DB search
MDEHKENIHTEDLNAKMSDARADDDEVKPCSRICPDEEAAPQVSPSQSNSDFSHPVYKEI
SMANGHINRMTMDELRIKLSELHLDTRGVKDVMKKRLKSHYKKQKLLQSAAEGGATDTYY
DYICVVDFEATCEEDNPSDFHHEIIEFPMVLINTHTLEIVDSFQEYVKPESNPQLSDFCV
QLTGITQKMVDEAAPFPDVLQRVVAWLQERELGTKYKYAILTDGAWDMSKFLNIQCRISR
IRYPQFAKKWINIRKSYGNFYKVPRTQTKLSTMLEKLGLQYEGRPHSGLDDSRNIARIAL
RMLQDGCQLRANERMHAGQLLSVPSSAPMEGAPPPHNPRSRD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcacaaagagaatattcacaccgaggacctgaacgcgaagatgtcggatgcc
agagcagatgatgatgaggtgaagccttgcagcaggatatgtcccgacgaggaagctgct
cctcaggtgtccccgtcccagtccaacagtgacttcagtcacccggtgtacaaagagatc
tccatggctaacggacacatcaaccgcatgaccatggacgagcttcggatcaagttgtca
gagctgcacctcgacacgagaggcgtgaaggatgtgatgaagaagaggctgaagagccat
tacaagaagcagaagctgctgcagtctgccgccgagggaggggccaccgacacctactat
gactacatctgcgtggtggacttcgaagcaacgtgtgaagaggacaacccgtccgacttc
caccacgagatcatagagttccccatggtgctcatcaacacgcacaccttggaaatcgtg
gactcgtttcaggaatacgtgaagccagagtcgaacccgcagctctccgacttctgtgtg
cagttaacggggataacgcagaaaatggtggacgaagcggccccgtttccggatgtcctc
cagcgggtcgtcgcttggcttcaggagagggagctcgggacaaagtacaaatacgccatc
ctcaccgacggggcctgggacatgagcaagttcctcaacatccagtgccggatcagccgg
atccgataccctcagtttgcgaagaagtggatcaacatcaggaaatcatacgggaacttc
tacaaggtcccgcgcacacagaccaagctgagcaccatgttggagaagttgggtctgcag
tacgaaggtcgccctcactccggtctggacgactcgcgcaacatcgcccggatcgctctg
cgcatgctgcaggacgggtgtcagctgcgcgccaacgagcgcatgcacgccggccagctg
ctctccgtccccagctcggcccctatggaaggagcccccccgccacacaacccccgcagc
agagactag
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