Gasterosteus aculeatus (three-spined stickleback): 120818448
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Entry
120818448 CDS
T07457
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120818448 (caprin2)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
120818448 (caprin2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
C1q
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
120818448
NCBI-ProteinID:
XP_040031467
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Position
IV:complement(23165832..23186959)
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AA seq
817 aa
AA seq
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MVQLSPSPTPSVTPQSECSESQENLVIAENVFSEVCSPGGLSALQLNLETSTVYYGYDTY
IVDGLICLKHKIRNLEKKKLKLEDYRKRLNWGEELNNDQMEAVKKYEEVLHNLAFAKELH
KSLNALTQNLLMAQNKAIRKEQVLKEEMERKHLSTVLQIQHLLRCMQQEHVRRDLLSGSN
QAPHIASQQLQSLNQLAALLGVKRNNGLSLEEQMEQAAMAYLDLLEGKDKPVAGSTFKLF
KEELTRLSNCKYFSCLPCPPNKSPEVLLRSSSNSTPSKSKLKERSRESWKEDFQATMERE
PPDCWDIEVTDGPDSPQAAVYKPWRGAATLIPKVPVATKKQYIDCKQKKETGAKSKQRAK
SAVEVFSYPYDLPKDPVLRKLHLEDLMTTIHGSFSFMQDSLLDGNITATNDYPRLKRQPS
RSPLPLGHTVLRSPVNVLPKAMHSTPLPTKLLEHKASLTNEDPFLEICDLKPSSTDLPHV
AVAESSKQSPLTGMVSCTSTPPQGQSFSTPPARRTLTSSHFQNIQPANRCIASTQTPPEF
LTSEEEEPLLVYHSDYTVENGGPVFPSPEQSDGSVGRPGQLYYSRGSVRGSCTSQTDLRD
TGPVIYAARDSGCQHGYSREGGRHNLSAAWSDSSQVSTPNREGAFTIVDSGHGDSLSLAT
IEVPLTPHGHQHTLLPIHLHPLSQPLRVAFNASRTANFAPGNLDQPIVFDQLHTNLGEMY
DTHIGRFTCPVDGTYVFIFHILKLAINVPLYINLMRNEEVMVSAYANDGAPDHETASNHA
ILPLFQGDQVWLRLHRGAIYGSTWKYSTFSGFLLYQD
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctttctccttcccctactccgagtgtcaccccccaatccgagtgctcagaa
agtcaggagaacctggtaattgctgaaaatgtattttcagaggtatgctcaccaggtggt
ctgagtgctctgcagctcaacctggagacctctactgtctactatggctatgatacctat
atagtagatggtctcatctgcctcaaacacaaaatcagaaatttggagaaaaagaagctg
aaactcgaagactacagaaagaggctgaactggggtgaggaacttaacaatgatcagatg
gaggctgtaaaaaagtacgaggaggtcctgcataatctggcgtttgcaaaggagctccac
aaaagcctgaatgccttgactcagaatttgctgatggcacagaataaggccattcggaag
gagcaggtgttgaaggaagagatggagaggaagcatctgagtactgtgctgcaaatccag
caccttctccgctgcatgcagcaggagcacgtcagaagagacctgctgagtggaagcaac
caggcgccacacattgcatcccaacagctgcaaagcctgaatcagcttgccgctttgctg
ggggtcaagaggaataatggactgagtttagaggagcagatggagcaagcggccatggcc
tatttggacctgctagaggggaaagacaagccagtggctggatccacatttaagcttttc
aaagaagagctgaccaggctgtctaactgcaagtacttcagttgtcttccctgtccaccc
aacaagtcaccagaggtgttactgaggtcaagcagcaatagcaccccatcaaagtcaaaa
ctaaaagaacgttccagggagagctggaaagaggacttccaggcaacaatggagcgtgag
cctccggactgctgggatattgaggttacagatggacctgactcaccccaagctgcagtc
tacaaaccgtggagaggagctgccactttaatccccaaggtcccagtcgccaccaagaaa
caatatattgactgcaaacagaaaaaggaaactggagccaaaagcaagcaacgtgccaaa
tctgcagtggaggttttcagctatccatatgacttacccaaagaccctgtcctgaggaaa
ctgcacctagaggacctaatgacgacaatccatggctctttcagtttcatgcaggactct
cttctggatgggaatattactgcaactaacgactatccaagactgaagagacagccgtct
agatctccactgcctctgggtcacacagtcttgagaagcccagtcaatgtcctgccaaaa
gcaatgcattccaccccactgccgaccaagcttcttgagcacaaagccagtctgacaaat
gaggacccattcctggagatctgtgacctgaagccttcctcaacagacctacctcatgtt
gcagtagctgagtcaagtaaacagtccccccttactgggatggtttcttgcacctcaacc
ccccctcagggacaaagtttctctacacctcccgctaggcgaactctaacatcttcccat
tttcagaacattcagccagccaatcgctgcattgccagtacacaaaccccaccggagttt
cttacctcagaagaagaagaaccactgttggtctaccactcggattatacggtggaaaat
ggtggacccgtcttcccgtcccctgaacagtcggatggaagcgtaggtcgtcccggccag
ttgtactatagcagaggatcggtgagaggatcctgcacctcccagactgatctaagggac
actggccctgtcatctatgctgccagggactctggatgtcaacacggttatagccgcgaa
ggaggaaggcataatttgagtgcagcatggagtgactcttcccaggtgagcacaccgaac
cgagaaggagcttttaccattgtggactctggtcatggagattccctctctctcgccaca
attgaggtccctttgacaccccatggtcaccagcacacccttcttccaatacacctccac
ccactttctcagccacttcgagtagccttcaatgcctctcgcactgccaactttgcacca
ggaaacctggaccagcctattgtgtttgaccagctgcacactaacctaggggagatgtac
gacacccacattggccgtttcacctgtcctgtcgatggaacctatgtgttcatcttccat
atcctgaaactcgccatcaacgtgcccctctacataaacctcatgcgcaacgaagaggtg
atggtgtctgcgtatgccaatgatggagccccagatcatgagactgccagcaaccatgcc
atcctgcctctctttcaaggcgaccaggtgtggctacgattgcatcgcggtgcaatctat
ggcagcacctggaagtacagcactttctctggcttcctgctgtatcaggattga
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