Gasterosteus aculeatus (three-spined stickleback): 120818901
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Entry
120818901 CDS
T07457
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04510
Focal adhesion
gat04517
IgSF CAM signaling
gat04518
Integrin signaling
gat04519
Cadherin signaling
gat04520
Adherens junction
gat04810
Regulation of actin cytoskeleton
gat04820
Cytoskeleton in muscle cells
gat05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120818901
04518 Integrin signaling
120818901
04519 Cadherin signaling
120818901
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120818901
04520 Adherens junction
120818901
09142 Cell motility
04820 Cytoskeleton in muscle cells
120818901
04810 Regulation of actin cytoskeleton
120818901
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120818901
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gat04812
]
120818901
04147 Exosome [BR:
gat04147
]
120818901
Cytoskeleton proteins [BR:
gat04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120818901
Exosome [BR:
gat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120818901
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Metal_resist
VMAP-M0
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
120818901
NCBI-ProteinID:
XP_040031712
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All DBs
Position
5:complement(10642460..10661961)
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AA seq
1066 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKD
TVQTTEDQIMKRDMPPAFIKVENACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPILISGIKIFVTTKTSGSQGVEESLKNRNFTFEKMSAE
INEIIRVLQLTSWDEDAWANKKDTEAMKRALGLIDSKMAQAKNWLRDPSAQSGDAGEQAI
RQILDEAGKVGELCAGKERRDIVGTAKTLGQMTDQVSEMRARGHGASAAAMQKAQQVSQG
LDVLTGKVENAARKLEAMTNSKQAIAKRIDAAQNWLADPNGGPEGEENIRGLLTEAKRIA
DMSEDPKERDDILRSIGDIAAMTAKLSDLRRQGKGDTPEARALAKQIATALQNLQSKTSK
AVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDSGVGQAAIRGLVAEGRRLANALLGPYRQ
ELLGKCEQVEQLMAQLADLAARGEGDSPQARAVAQHLEEALKDLKGKMQEAMTQEVSDIF
SDTTTPIKLLAVAATAPLDAPNRDEVFDERAANFQNHANRLGTTAEKAAAVGTANKSTVE
GIQAAVKSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEDAIKNDLEKCRLAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REMVKAASDGLSQTISPMVMDAKAVAGNIHDPSLQKGFLDSGYRILGAVAKVREAFQPQE
PDFPPPPPELEQLSLNDEAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQTGDMVNEPMMV
AARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGGGNKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWIRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtttttcacacaaagacgatagaaagcatcctggagccggtggcccaacagata
tcccatctggtcataatgcacgaagaaggtgaggtggacgggaaggcgatcccggacctg
acggcgccggtggctgccgtgcaggcggccgtaagcaacctcgtccgtgtgggtaaagat
actgtacaaaccacagaggaccagatcatgaaacgggacatgccaccagctttcatcaaa
gtggagaacgcgtgcactaagctggtgcaagcggcctccatgctgaaagccgatccatac
tctgtccctgctcgggattacctcatcgacggctctcgggggatcctctctgggacctct
gacctgctcctgacctttgacgaggccgaggtgcgcaaaataatccgcgtgtgcaaaggc
atcctggagtacctgactgtggcagaggtggtggaatccatggaggacttgatcacgtac
accaagaacctgggaccaggcatgacgaagatggcaaagatgatagatgagcgacagcag
gagctcacacaccaggagcaccgcgtgatgttggtcaactccatgaacaccgtcaaagag
ctgctgcccatcctcatctcaggtatcaagatctttgtgaccaccaagacatctggcagc
cagggggtggaggagtccttgaagaaccgcaacttcacctttgagaagatgagcgccgag
ataaacgagatcatcagagtcctgcagctgacgtcctgggacgaggacgcctgggccaac
aagaaggacaccgaggccatgaagagggctctggggctcatcgactcaaagatggctcag
gcgaagaactggctgagggatccaagcgctcaatctggggatgcaggcgagcaggccatc
cgccagatcctcgatgaagccgggaaggttggagaactgtgtgctggcaaagagcgcaga
gatattgtgggcacagccaagaccctgggccagatgacggaccaggtgtctgagatgagg
gcaagaggtcacggggcgtccgcggccgccatgcagaaggcgcagcaggtttctcagggg
ctcgacgtgctaaccggcaaggtggaaaacgccgcccgcaagctggaggccatgactaac
tccaagcaggcgatcgccaaaaggatcgatgctgcacagaactggctggcggaccctaat
ggcggaccggagggagaagagaacatcaggggcctgcttaccgaggccaaaaggatcgcg
gacatgtctgaggacccaaaagaacgagacgacatcttgcgctctattggagacattgct
gccatgactgctaaactgtctgatctcagaagacagggtaaaggtgacactcctgaagcc
agagctttggctaaacagatcgcaacagctctgcagaacttgcagtccaagaccagcaaa
gctgtggccaacagcaggcctgcaaaggcagctgttcacttggaaggaaagattgagcaa
gcacagcgctggatcgacaatcccaccgtggatgacagcggtgtgggccaggctgccatc
cgcgggctggtggctgagggccgcaggctggccaacgctctgctcgggccatacaggcag
gagctgctcggtaagtgtgagcaagtggagcagcttatggcccagctggccgacctggcg
gcccgcggcgaaggggattcacctcaggcacgagctgttgctcagcacctcgaggaagct
ttaaaagacctaaagggtaagatgcaagaggcgatgactcaagaggtgtccgacatcttc
agcgacaccaccacccccatcaagttactggcagtggctgccaccgcccctctggacgcc
cccaacagagatgaggtctttgacgaaagggccgccaactttcagaaccacgccaatagg
ctcggcaccacagcagagaaggccgctgctgtcggtaccgccaacaaaagcacggtggag
ggaatccaggcagctgtcaagtcaacaagggacttaacaccgcaagtggtatctgctgct
cgcattctgctgagaaaccccggcaaccaagctgcttacgaacattttgaaaccatgaag
aatcagtggattgacaatgtggagaaaatgacaggtttggtggacgaggccatcgatacc
aaatccttgctggatgcctcagaagacgccatcaagaatgacttggaaaagtgccgcttg
gccatggctaaccaccagcctcagatgctggtcgccggcgctaccagcatcgcccgcaga
gccaatcgtatcctcctggtggcgaagcgagaggtggagaactctgaggatcctaaattc
agggagatggtgaaggccgcgtctgatggactgagccagacgatctctcctatggtgatg
gacgctaaagccgtggctggaaatatccacgatccgagtctacagaaaggctttctggac
tcgggttataggatccttggtgctgtggcaaaggtcagagaggcattccagccccaggag
ccagacttcccaccacctcctcctgagctggagcagcttagtcttaacgatgaggcggca
ccacccaaacctcctcttcctgagggtgaggttcctccccccaggcctcctcccccagag
gagaaagatgaggagttccctgagcagactggtgatatggttaacgagcccatgatggta
gctgccaggcagctccacgatgaagcccgcaaatggtccagtaaaggcaatgacatcatt
ggtgccgccaaacgaatggccttgctcatggcggagatgtctcgtctggtgcgtggaggc
ggtggaaacaagcgtgccctcatccaatgcgccaaggacatcgccaaggcttccgatgaa
gtcacgcggctggccaaggaggtggccaagcagtgcactgacaagcgaatccggaccaac
ctgctccaggtgtgcgagcgcattcccaccatcagcactcagctcaaaatcctgtccaca
gtcaaggccaccatgttgggtcgtaccaacatcagtgaagaggagtctgagcaggccacc
gagatgttggtccacaatgctcagaacctgatgcagtccgtgaaggagacggtcagggag
gctgaggcggcttccatcaagatccgcacggatgctggtttcaccctgcactggatccga
aagaccccctggtaccagtaa
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