Gasterosteus aculeatus (three-spined stickleback): 120818907
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Entry
120818907 CDS
T07457
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gat01002
]
120818907 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120818907 (usp42)
Enzymes [BR:
gat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120818907 (usp42)
Peptidases and inhibitors [BR:
gat01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120818907 (usp42)
Ubiquitin system [BR:
gat04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120818907 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
120818907
NCBI-ProteinID:
XP_040031730
LinkDB
All DBs
Position
V:complement(14342237..14351593)
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AA seq
1176 aa
AA seq
DB search
MTIVDRSSEKSDHESVGCKRSPFTSGNVGMDGSCSSSWAMGPSMSGDSPRLKAAGGCLGP
TPGAAVYNSTPSSVDWPKEQVMSGGDGIDSPQKVLFLQERLNLKWTQVHRIGAGLQNMGN
TCFLNSALQCLTYTPPFTNYLLTREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIG
VLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFIHQVFGGYLR
SRVKCLNCKAVSDTFDPFLDITLEIKTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMVT
ASKRFTIHRSSNVLTLSLKRFANFSGGKITKDVKYPEYLDLRPFTSQSQGEPLVYGLYAV
LVHSGFSCHAGHYFCYVKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFYVKSRDVRRAG
DYSHMSHNPGVPGQSSPRPVVIPRINTTVHHGNTGFIGPQLPPHMTKRNLHVNGNGSLRD
YPTNSKPSTSVVGKPNHGPASSSASISHSISRPTMIPDHDKRQKLSFFIGQGKLNRPSSS
SSYSQPSSASGSSCSSSSLSSSQSTSDVRFVPRQLNHASRSNGDHHASFLVPYGQESSEE
SDQENCGSLAASHLNGNKRTGAAFDHSTRATNGLSAVHHNGNGLHGPTNGVSECSQNGHH
HEHHKVNGHEPPDKVSGSNHGGFSSVTAVAANGLDSDHSQTSDEAHNSSSSKASSSPGIH
PASGDSQHLSAPDTRASDASEPLPQHAAPSAVTSPPSAAPTKTHSVSSKESASPAARHCD
PTASSVPPDCSRKHNGASAAPQKVCSGGGDARDFPPTCSASAGTERRGDSDSDSKEKHQF
KPSLRGHEVQSYRECERDRSYWDRDRERHYRDRSHRRDPRDHHHQRPYRERFPPHSRSYR
DSGSEQRRERSLQHSRERDRDRCSNHHHHYHSRRYKEDRGRERRGRGSPSREKCPDRGRR
RPDSRESRGSGGRERDRYPAKEENSSEPETSTKSMDSPTQACRSAFGSAPDGGDQNHRRS
ADPLSKERDDGSEARRSGKHKKSKKKKKSKDKDRRRDSGSSEVDSDRATETKKKKKKKKK
RSRDGESRSPGASRRQRSRSSEEEESRKRRHDDTKEAQRDRVSLPEKRRRPDHTDPVSSN
HAAPTHGSCHLHLNGHRAIDGVPPPKSASKIPNAWK
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatcttcagagaagtctgaccacgagtcagtcgggtgtaagcga
tctcccttcaccagtggaaacgtggggatggacggtagctgttccagcagctgggcgatg
ggtccgtccatgtccggcgactctccgaggctgaaggccgcaggaggctgcctcggcccg
acgcccggagccgcagtctacaacagcacgccctcctcggtggactggcccaaggagcag
gtgatgagcggtggtgatggcatcgactcgccccagaaggtccttttccttcaagagcgg
ctcaacctaaagtggactcaggttcaccgcattggtgcaggcctgcagaacatggggaac
acctgctttcttaactcagccctgcagtgtctcacttacacacctccttttactaactat
ttgctgacacgggagcactccaaaacatgtcacgagccggggttctgtatgatgtgcacc
atgcaaaaccacatcattcaggtttttgcaaactctggaaatgtcattaagcccattggt
gtgctgaatgagctcaaaaggattgctaagcacttccgctatggaagccaggaggatgcc
cacgagttcctgcggtacacagtggacgctatgcaaaagtcctgcttacctggaaccaaa
ttggaccgacaaacgcaggcaaccactttcatccatcaagtatttggcgggtacctacgg
tccagagttaaatgtttaaactgcaaagcagtctctgatacattcgacccttttctagat
ataactctagaaattaagacggctcccagtgtctccaaggctctggagcagttcgtcaag
cctgaacagctggatggagaaaatgcctacaaatgcaccaagtgcaaaaaaatggtcaca
gcctcaaagagattcaccatccaccgcagttcaaatgtgctcaccctctcactcaaacgc
tttgcaaacttcagtggaggcaaaatcacaaaggatgtgaaatatccagagtacctggac
ctgcggcccttcacgtctcagtctcaaggggagccgctggtctacgggctgtatgctgtg
ctcgtccactctgggttcagctgccacgctggacactacttctgctacgttaaggccagc
aatgggcagtggtatcagatgaacgactcctccgtgtccgtcagcgacatccgctccgtc
ctcaaccagcaggcctacgtccttttctacgtcaagtcccgtgatgtgaggagagcaggc
gactacagccacatgagccataacccaggcgtccccggtcagtcttctccacggccggtg
gtgataccgcgcatcaacaccaccgtccaccacggcaacaccggcttcataggcccgcag
ctgcccccacacatgaccaagcgcaatctccacgttaacgggaatggatctctgagggac
tatcccaccaactccaagcccagcaccagcgttgtgggcaaacctaaccacggaccggcc
tcttcctctgcttccatctcccactcaatcagccggcccactatgatcccggaccacgac
aagcgccagaaactttccttcttcattggacaaggcaaactgaaccgcccgtcgtcctcg
tcgtcttacagccagccgtcctctgccagcggcagcagctgctcctccagctctttgtcc
tcctcacagtctacctcagacgtccgcttcgttccacgtcagcttaaccacgcgtcccgc
agcaacggggatcaccacgcgtccttcttggtgccctacggccaagagtcctcagaggaa
tcggaccaggagaactgtggctctctggccgcgtcccacctcaacggaaacaagcgaacg
ggggccgcctttgatcattccacgcgagccaccaacggactgtcggcagtgcaccacaat
ggcaacgggttacacgggccgaccaatggcgtctccgaatgcagtcagaacggacaccac
catgaacaccacaaagtgaacggacacgaaccccccgataaagtctctggcagtaatcat
ggaggtttttcctctgtgactgctgttgctgctaatggactcgacagtgaccacagtcaa
acaagtgacgaggcccataattcctcctcatccaaggccagttcttctccgggcatccat
cctgcgtccggtgacagccagcacctctccgccccggacacgagggcgagcgacgcgtct
gagcccctccctcagcacgcagcgccctccgccgttacctctccgccctcggctgctccg
acaaagacccactccgtctcgtccaaagaatcggcttcccctgctgctcggcattgcgac
cctacggcctcatccgtcccgccggactgctcccggaaacacaacggggcctctgcagcg
ccacagaaagtctgcagcggtgggggggatgcgagagatttcccaccgacctgcagtgcg
tcagcggggactgaaagacgcggcgattctgattctgattccaaggaaaaacaccagttc
aagcccagtttgagaggccatgaagtacaaagttacagagagtgcgagagagacagatcg
tactgggacagagaccgggagagacactacagggaccggagtcaccggcgggaccccaga
gaccaccaccaccagcggccgtacagggagcgttttcctcctcacagccgctcctacagg
gactcggggtccgagcagcgccgggagcgaagcctccagcactcgagggagcgcgaccgc
gacagatgctccaaccatcaccaccattatcacagccgccgctacaaagaggaccggggc
cgtgagcggaggggacgcggctctccgtccagggagaagtgtcccgatcgagggaggcgc
cggccggacagccgagaatcacgggggagcggcggcagggagagggaccgctatccggca
aaagaagagaattcctcagagccagaaacctccacaaagtccatggactcgcccactcag
gcctgtcgctccgcgttcggatcggctccagacgggggggatcagaatcacaggaggtcg
gctgatcctctgagcaaggagagggacgacggctccgaggcccgccgctctggaaaacac
aagaagagcaagaaaaagaagaagtcgaaggataaagaccggcgccgtgacagcggaagc
tccgaagtggattccgaccgagccactgaaacaaaaaagaagaagaagaagaagaaaaag
aggtcgcgggacggcgagtcgcgcagcccgggagcgtctcgccgccagaggagcagaagc
agcgaggaggaggagagccgcaagcgtcgccacgacgacaccaaggaggctcaacgcgac
cgcgtgtctctgccagagaagcgccggcgcccggaccacacggatccagtctcctccaac
cacgcggcccccacacacggttcgtgtcacctccatctcaacggacacagagctatcgac
ggtgtccctcccccaaagtcggcctcaaaaatacccaacgcgtggaaataa
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