Gasterosteus aculeatus (three-spined stickleback): 120819227
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Entry
120819227 CDS
T07457
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120819227 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120819227 (trip12)
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120819227 (trip12)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
HECT type E3
120819227 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
120819227
NCBI-ProteinID:
XP_040032364
UniProt:
A0AAQ4PL69
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All DBs
Position
I:complement(6194468..6216268)
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AA seq
2077 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTVTGRLQSEQVKNKVNSPPESKRPNSKASKAT
ASSTAGQSRGHSSRRSGLTLSVASFVLQDEPEAAGTSEQERPGHQSKSEGTRGLKRSDAP
DLISTFGPTPAKKSKSVPPPKDNTSETKKVPAKSKKRPLAPEAPALSGRGQSKKSGAAGA
SPIQKRKKADSLPGLSSTAGSLPNRTEGRTAKPTKLASKSAASAKAGCSNVTDSSSSAST
SSSSSTTGPSSATTQGARVKQGKDQTKARRSRSASSPSPRRSTRDKEQAKTASSSKFEWA
ARFNPKVNLPKPKLSLPGSSKTETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSFRRS
TRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEASQGASAS
SSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASS
KAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFD
IMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKA
ILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDK
KSVESTCLCFARLVDNFQHEENLLQEVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMFS
LMCSNCPCLAVQLMKQIRLISRPINEESQVVVTPYDIAETLRFLLCGASNGSCQEQIELV
PRSPQELYELTSLICELMPCLPREGIFAVDVMLKKGSAQTTEGAIWQWRDDRGLWHPYNR
IDSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGS
HQEVRREDARAQLMKEDPELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIFFAD
AELLKDVLRNHSVSSHIASMLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQV
KNLSESESFLVTSPPKACPSGTASVCTTTISTASTTSANNATPDLGSPSFQHSMDDSLDL
SPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTSTQSPKSSFLASLNPKTW
GKLGAQTNNANSEPSRTAGVSGLARAPPKDSISNNRDKIKAWIKEQASKFVERYFNSENV
DGSNPALNVLQRLCTATEQLNLQVDGGLECLVEISSIVSESDVSSFEIQHSGLVKQLLVY
LTSNTDRDLLSRDVRLKRFLHVFSSCPVQGMEPLGRLDPTENGPYLAMVHKMNSCLSQME
QFPVKVHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALV
QAIERYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPY
NMTVYQAVRQYSLQAEEERESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGSKDAVGGK
RGRAQTAPTKTSPRNAKKQDELWHDGVCPSVVNPLETYLTSEPPETITFDDPSLEVNLLL
RVLHSISRYWFYLYDNAVCKEIMPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELG
KTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINR
DELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEV
TLANPKGSQEGTKYMFSSKGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLD
LPLGLPFYKWMLRHEASISSHDLVNIDPGVAKSIQHLEDIIRQKKRLEQDRSQTRENLQQ
ALESLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDFPVTIYNLEEYLRLVVYWTLNEGVS
RQFESFREGFESVFPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRA
VRFLFEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPS
VMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccacacagtcacaggaaggttgcagtcagagcaagtaaaa
aataaagtgaattctccacctgaaagtaaaagacctaattctaaggcttccaaagccaca
gccagctccaccgctggccagtccagaggccacagctcaagaagaagcggtcttactctt
tccgtggcttcatttgtgttgcaagacgagccagaggccgcggggacatctgagcaagaa
cgaccaggccaccagtcaaagagcgagggcactcgcgggctgaagcggagcgacgctcct
gatctaattagtaccttcggaccaacccctgccaagaagtccaaatcggtcccaccaccc
aaagacaatacctcagagaccaagaaagttccagcgaagtccaagaagagaccacttgct
ccagaagcacctgcattgtcaggtcgcggccagagcaagaagagcggggccgctggggcc
tcaccgatccagaaacggaagaaagcggactccctccccggtctaagtagcaccgctggg
tccctccccaatcgtaccgagggcagaactgcaaaacccaccaagctggcgtctaaatcg
gccgcctcagccaaagctgggtgtagcaacgtgacggactcctcctcttctgcctccacc
tcttcctcttcctcaaccacagggcccagcagcgccaccacgcagggcgcccgagtcaaa
cagggaaaagatcagaccaaggcacggcgctctcgctcagcctcaagcccctccccccgc
cgcagcacccgagacaaggagcaggccaaaaccgccagctcctcaaagttcgagtgggca
gcgcggttcaaccccaaagtcaacctgccaaaacccaaactgtccttgcccggatcctcc
aaaactgagacctccaaacctgggccttcgggattacaagctaaactagcaagtttgagg
aaatccactaagaagcgaagcgagtctcctccagcagagctccccagctttcggcggagc
acacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctgggc
aagcgcggggcagccgacgctcgccggcaggagaaaatggccgactctgacaacaaccag
gacggggccaactcgtccgccgctcgcaccgacgaggcgtcacaaggggcttcagcttca
agctccgtcgctggagcagtgggcatgaccacctctggagagagcgagtcggatgactct
gaaatgggaaggctccaagccctgctggaggccaggggtctccccccacatctcttcggg
ccccttggaccccggatgtcccagctgtttcacaggaccatcggcagcggagcgagctcc
aaggcgcagcagcttctgcagggcctgcaggccaccggagacgagtcccagcagctccaa
gcggccatcgagatgtgccagctgctagtgatgggcaacgaggagacccttggtggattc
cctgtcaagagcgtggtgcccgctttgattacgctcttacaaatggagcataactttgac
attatgaaccacgcctctcgtgcactcacgtatatgatggaggcgcttcctcgatcctct
gctgtggtggttgatgccattcctgtcttcctggagaagcttcaggtgatccaattcatt
gatgtagcagagcaggccctgactgccctggagatgttgtcaaggcgacacagcaaagcc
atattgcaggctggtgggctcgccgactgcctcctctacctggagttcttcagcatcaat
gctcagaggaatgccttggccatcgcagccaactgctgccagagcattactccagacgag
ttccactttgttgctgattctctacccctgttgactcagagactcacacaccaggataaa
aaatctgtggaaagcacttgcctctgtttcgccagactggtggacaactttcagcatgag
gagaacctgctgcaggaggtggcgtcacgggacctgttgaccaacattcagcagctgctg
gttgtgacccctcctgtgctcagctcggggatgtttatcatggttgtgcgcatgttttcc
ttgatgtgctctaactgcccctgcctggcagtccagcttatgaaacagatccgattgatc
tcgcggccaatcaatgaagaatcacaagtggttgtaactccttatgacatagcagaaact
ctgcgtttcctcctgtgtggggcctcaaatggcagctgccaggaacagattgaactggta
ccccgcagccctcaggagctctacgaactgacctccctcatatgcgagctgatgccctgc
ctgcccagagagggcatctttgccgttgatgtaatgctgaagaagggcagtgctcagacg
acggagggagccatctggcagtggagggatgaccgcggactgtggcatccatacaaccgc
attgacagccgcattattgagacagcacaccagaacggggaggatgagatcagcttgtca
accctgggccgtgtgtacacaattgactttaactctatgcagcagattaatgaagacaca
ggaactgcacgtggtatccagaggaaacccaatcctcttgccaaccctaatacagggagt
caccaggaggtccgtcgagaggacgcacgcgcccagttgatgaaggaggaccctgagctg
gcaaagtgctttatcaaaactctgtttggggtcttgtatgaggtgtacagctcctcggcc
ggccctgcggtcagacacaagtgccttagagccatcctcaggatcatcttctttgctgat
gcagagctgctgaaggatgtgctgaggaaccattctgtgtccagtcacattgcctccatg
ctatccagccaggacctgaagattgtagtgggttctcttcagatggctgagatcctcatg
cagaagctgcctgatgtcttcagtgtctatttcagaagagaaggtgtgatgcaccaggtg
aagaacctgtcagaatccgagagctttcttgtcactagtcccccaaaggcttgccccagt
ggtactgccagtgtgtgcactaccaccatcagcactgcgtccaccacgtccgctaacaat
gcaactcctgacctgggctcccccagcttccagcacagcatggacgactcactggacctc
agcccccaggggcggttaagtgatgtcctaaagaggaaacggcttccaaaaagagggccc
aggaggccaaaatactctcccccaagagatgatgacaaagtagacaatcaggccaagagc
cctaccagtactcagtcacccaaatcctccttcttggccagtcttaaccccaagacctgg
ggcaagctgggtgcccagaccaacaatgcaaactctgagccctcacgcacagcgggagtg
agtggcctggcccgggccccccccaaggactccatttccaacaacagagacaaaataaaa
gcctggatcaaagagcaggcgagtaagtttgtggagcgctacttcaactctgaaaatgtg
gacggcagcaaccctgcgctgaatgtactccagagactttgcacagccactgagcagctc
aacctgcaggtcgacggtggtttggagtgcctggtggagatctccagtattgtatcagaa
tctgatgtgtcgtcttttgagatccagcacagcgggctggtgaagcagctcctggtctac
ctgacctccaacaccgacagggacttgctgagccgtgacgtgcggctcaagcggttcctc
catgtgttctccagctgtccggttcaaggaatggagcctctaggtcgtctggaccccaca
gagaatggcccgtacctggcaatggtgcacaaaatgaacagctgcctgagccaaatggag
cagttccctgtcaaagtgcacgatttccccagtggcaacggcaatggcagcaggggatcc
caggcgctgaagtttttcaacacacatcagctcaagtgtcagctccagagacaccctgac
tgtacgaatgttaaacagtggaaaggcggcccggtgaagattgacccgctggccctggtg
caggccatcgagagatatcttgttgtcagaggttacggccgaatcagagaagaggatgaa
gacagtgacgacgacggttcagatgatgaaatcgatgagtctctggcggcccaattcctg
aattccgggagtgtgcgtcacagactacaattctacatcggtgaccacctgctgccgtac
aacatgacggtgtaccaggctgtacggcagtacagtctccaagcagaagaagaaagggag
tcgacggacgatgaggcaaacccacttggccgagcgggcatctggaccaaaacgcacaca
atatggtataagcccgtgagagaggacgaggatggcagcaaagacgctgtgggtgggaag
cggggtcgggcccagactgctcccaccaaaacctcgcctcgcaacgccaagaagcaggat
gagctgtggcacgacggcgtgtgtcccagtgtggtcaaccccctagagacatacctcact
tcggagcctccagagaccataacctttgatgacccctctttagaggtcaacctgctgctg
agggtcttgcactcaatcagtagatactggttctacttgtatgataatgctgtgtgtaag
gaaatcatgcccaccagtgagttcattaacagtaagctgacagccaaagcgaaccgtcag
ctccaagacccgctggtcattatgacggggaacatccccacttggctcatagagctcggg
aagacttgtccgttcttcttcccctttgacacccggcagatgttgttctacgtaaccgcc
ttcgatcgcgaccgagctatgcagcgcttactggacacaaaccctgagatcaaccaatcg
gattctcaggacagcagagtcgcaccgcgtcttgacagaaagaagaggacgataaaccgc
gacgagctgctgaaacaggccgagtccgtgatgcaggacctcggcagctccagggcaatg
ttggagattcagtacgagaacgaggtgggcacaggtctcggcccgaccttggagttctac
gctctggtgtctcaggagctccagcgggccgacctcggcctgtggaggggcgaagaggtc
actctggccaatcctaaaggaagccaagagggaacgaagtacatgttcagctccaaagga
ctgtttgctgttcccttcggaaggacaaccaaaccagcgcacatagccaaaatcaaaatg
aagttccgtttcttaggaaagctaatggccaaagccattatggacttcagattgctggac
ctgcccctggggctgcccttctataagtggatgctacggcacgaggcgtccataagctcc
catgacctggtgaacattgaccccggtgtggccaagtccatccagcacctggaggacatc
atccgccagaagaagaggttggaacaggaccgatcacagacgagggagaacctacagcag
gccctggagagcctgaacatgaatggctgctcagtggaggacctcggtttggacttcacc
cttccagggtttcccaacattgagctgaaaaagggcggcaaagactttcccgtcacaatc
tacaacctggaggagtacctcaggctggtggtgtactggactctaaatgaaggagtgtcc
agacaatttgagtcatttagggaagggtttgaatctgtcttccctttgcatcacctgcag
tatttctatccagaggagctggaccagttgctgtgtggcagtaaatccgagacgtgggac
gtcaagacgttgatggagtgctgtcgaccggaccacggctacacacatgacagccgtgcc
gtgcggttcctgtttgaggtgctgagcagctttgatgccgagcagcagagactgtttctg
cagtttgtcacaggaagccccagactgcctgttggtggtttccggagcctgaacccccct
ctgacgattgtgaggaagacgttcgagtcgacggagaacccggatgacttcctcccctcg
gtcatgacctgtgtcaactacctgaagctgcctgactactccagcatcgagataatgcga
gagaaactgttgatcgcggcccgcgagggccagcagtcgttccacctttcctga
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integrated database retrieval system
