Gasterosteus aculeatus (three-spined stickleback): 120819252
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Entry
120819252 CDS
T07457
Name
(RefSeq) thyroid hormone receptor alpha-B-like isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04080
Neuroactive ligand-receptor interaction
gat04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120819252
04081 Hormone signaling
120819252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120819252
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gat03310
]
120819252
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120819252
Nuclear receptors [BR:
gat03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
120819252
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120819252
NCBI-ProteinID:
XP_040032415
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Position
V:6557668..6649049
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AA seq
428 aa
AA seq
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MELVSKEQDSSPPEGEEKRWLNGPKRKRKNSQCSLKSMTAHSPSDSSKSLELKEASKEGY
IPSYLEKDEPCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDGCCIIDKI
TRNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRRLIEENRQRRKKEEIVKTLQNRPEPTD
GEWEVIHLVTEAHRHTNAQGAQWKQKRKFLPEKIGQSPVAPTSDGDKVDLEAFSEFTKII
TPAITRVVDFAKKLPMFSGLPCEDQIILLKGCCMEIMSLRAAMRYDPESETLTLSGEMAV
KREQLKNGGLGVVSDAIFDLGKSLAQFNLDDTEVALLQAVLLMSSDRSGLTCMDKIEKCQ
ETYLLAFEHYINYRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFL
EVFEDQEV
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggaactcgtgtccaaggagcaggactctagcccacctgagggagaagagaaacggtgg
ctcaatggcccgaaaaggaagaggaagaacagccaatgttccttgaagagtatgactgca
cattctccgagtgacagctccaaatccctcgagctgaaagaagcgagtaaagaagggtac
atccccagctacctcgaaaaggatgagccatgtgtggtgtgtggtgacaaggccacgggt
taccactaccgctgcattacctgcgagggctgcaagggtttcttccgaagaaccattcag
aagaacctccatcccagctactcctgcaagtacgatggctgctgcatcatcgacaagatc
acccgcaaccagtgccagctgtgccgcttcaagaagtgcatcgcggtgggcatggccatg
gacttggtgctggacgactcaaagcgggtggccaagcggcgtctgatcgaagagaaccgg
cagcgacgcaagaaggaggaaatagtgaaaaccctccagaaccgtccagagcccaccgat
ggcgagtgggaggtgatccacctggtgacggaggcccaccggcacaccaacgctcaaggc
gctcagtggaaacagaagcgcaaattcctgccagaaaaaatcggccaatccccggtcgcc
ccgacgtcagacggcgacaaggtggacctggaggcgttcagcgagttcactaagatcatc
actcctgccatcacccgtgtcgtcgactttgccaaaaagctgcccatgttctccgggctt
ccttgtgaagaccagatcattctgctgaagggctgctgcatggagatcatgtcgctgcga
gccgccatgcgctacgaccccgagagcgagacgctgacgctgagcggcgagatggcggtg
aagcgcgagcagctgaagaacggcggcctcggcgtggtgtcggacgccatcttcgacctg
ggcaagagcctggcccagttcaacctggacgacacggaggtggcgctgctgcaggccgtg
ctgctcatgagctcagatcgttcgggcctgacctgcatggataagatcgagaagtgccag
gagacctacctgctggcgttcgagcactacatcaactaccgcaagcacaacattcctcac
ttctggcccaagctgctgatgaaggtgaccgacctgcggatgatcggggcgtgccacgcc
agccgcttccttcacatgaaggtggagtgtcccaacgaactgttccccccgctcttcctg
gaggtcttcgaggaccaggaggtgtga
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