Gasterosteus aculeatus (three-spined stickleback): 120819353
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Entry
120819353 CDS
T07457
Symbol
tdrd1
Name
(RefSeq) tudor domain-containing protein 1 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120819353 (tdrd1)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Gene silencing
piRNA pathway
120819353 (tdrd1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
MYND_ZMYND11_ZMYD8
zf-HIT
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
120819353
NCBI-ProteinID:
XP_040032605
UniProt:
A0AAQ4NTQ9
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Position
V:11409361..11418515
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AA seq
1185 aa
AA seq
DB search
MTSVGRHHRTADTMYRAFSPNLLRPNLPLRKPSSGPVALSTPRPPAPSPPLSLPDATAAC
TVSGAIGDALTNVSAGRDQSAFFESTPPPLTVNFCNYCGQQGNLRCKRCKKMPYCSVACQ
TEDWKAHRRMCKPFDPEPQIEKPKETTASPLAGDGGSLPESKQSDASSLQRVYLKDLHMT
KIIKGADIQASVLEFYSPGRFFLLAQNPKLLEALQNISTELQKTYSCPSVTTYVPHVGEV
CAVKFSCDLNWYRGLVQTLTADQKTANILYIDFGNEENVPVDRIKPLAANIQPFSPCAMQ
CRISGVVPTAGSWSSECCILVKPLLAGKILTTRMVETHEDGCTHSVDITLPMGKNLSRFL
LDHGYAEEEAVNTAPTKKEIDAMVTASLDNFRRLSDGKDDNTWAQLPEPLTQAVGDAFYV
LITHFQSPSEMIVQKVENAGVIRELQLKLREHCSQAPAPQNFRPAPGTVCCAQFSEDKQW
YRAKVLGYSSEERICVGYLDFGNSEEVDLANLQPISTSLLAMPMQAIPCGLAGVRPVGES
WTEDCVLALQRRVVNRILRIEITGEHDGKLLVTMIDEASDPQANMAELLSSAGFAIPVPT
VSDQQAEKTASAAVDPQEPTAACEPLVWSCTRLPCDGQTVALLASVVENPQEFYCRVNNP
TDHQQLIELGAELKEHCEAKASPFVPKVGEPCCAMFPGDGKWHRAMVMGLSEDVSVYFVD
YGYSMKVEKNHLRSITARLLTLPFQAICCWLTGVEPVGSEWTSEAMLYFDRLVDGKQLSA
RVLSVTDQGYGLKLESRGKDVATALISEQLAKDPGALEAETVSGHTHQEKGQENDHSPKH
AHSNQATGVSLEEMPTEDRLPTPSKAPGFPVDWKAVELPLNTPFQPRVAAISGPSLFYLI
IPVQVDQQKLQEVMTELAAYCCDIPASLSSSVSCKPAVGAACCARFSADNNWYRAVVVEV
GENEASVIYADYGNAEKVPFSRILPIPMSLLQLPFQVTRCTLNGNEHLPANLPDLLLSGF
LATVQSFNGTENVLTLALPTENGGRLVSAMIRDAPKAEATSSPRTPAAQKVDQTDDPASA
AAAAAAAAAAAAAATSAAPEGLRSKSGTQKGLESTAAATGPPVDPEPEPQTPQQKKNTSA
VALNDPQTSSCCCLKLTTKIDDLERLMQQQLSLIKLLVGQKEIRF
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagtcggacgtcaccacaggacagctgacaccatgtatcgggcattctctcca
aacctgcttcgacccaacctgcccttgaggaagccatcatcgggccccgtggctctctcc
accccgaggcctccggccccgtcgccgcctctctccttgcccgatgctacggctgcgtgc
accgtgtcgggcgccattggagacgccctgacgaatgtatcagctggcagggatcaatct
gcattctttgaatccacaccaccacccctgactgtaaatttctgcaactactgtggtcag
caaggaaatttgcggtgcaagcgctgcaagaagatgccttactgctccgtcgcgtgtcag
acagaagactggaaggcacacagacgcatgtgcaagccctttgatccagaacctcaaatt
gaaaaacctaaagaaactacagcttcgccattggcaggagacggaggcagcctgcctgag
tcaaagcaaagtgatgcatccagcctccagagagtctatttgaaggacttgcacatgact
aaaatcatcaagggagccgacatccaggcatctgtcttagagttctacagccctggcagg
tttttccttcttgcccaaaaccccaaacttctggaagctctgcaaaacatcagcacagag
cttcagaaaacgtacagctgcccatcggtgacgacatatgttccccatgttggagaagtt
tgtgcggttaagttctcctgtgatctgaactggtacagaggacttgtccagaccttaact
gctgaccagaagactgctaatatcctttacattgactttggcaatgaagagaatgtcccc
gtggacaggataaagcccctggctgccaatatccagccattttctccttgcgcaatgcag
tgccgtatcagcggggtggtgccaacggctggcagctggtcgtcagagtgttgtatttta
gtgaaaccgcttttggccggcaagattttgaccactaggatggtggaaacacatgaagat
ggttgcacacattctgtggatatcacacttcctatgggaaagaatttaagcaggtttctc
cttgatcacggttatgcagaggaggaagctgtcaacacagcacccactaagaaggaaata
gacgctatggtgactgcgtctttggacaacttcagacgtctctccgatggaaaagatgac
aacacttgggctcagctaccagagccactgacacaggcagtgggggacgccttctacgtt
ttgatcacccacttccagtcacccagcgaaatgattgtacagaaggtcgagaacgccggt
gtgattcgggagttgcagctgaagctgcgggaacactgctctcaggccccagcgcctcag
aacttcaggccggccccgggcacagtttgctgcgcacagttctcagaggacaaacagtgg
tacagagccaaagttttgggttattcatcagaggaacgcatctgtgttggctaccttgac
tttggcaactctgaggaagtggacttggccaacctgcagcctatcagcacttccctactg
gccatgccaatgcaagctataccttgtggtctagcaggtgtgcgaccagttggggagagc
tggacagaagactgcgtgctggctctgcagcggagggtagtgaaccgaatactgcgcatc
gagatcacgggagaacatgacggcaagctgctagtgaccatgatcgacgaggccagcgat
cctcaggccaacatggccgagctgttgagctctgctggcttcgccattccggtccccacc
gttagtgaccagcaggcggaaaagacagccagtgctgctgtggacccccaagagcctacc
gccgcctgtgagcctctggtgtggtcttgcactcggcttccctgtgatggccagacagtg
gcactgctcgccagcgtcgtggagaaccctcaagagttctactgccgcgtcaacaacccc
acagaccatcagcagctgatagagctgggagctgagttgaaggagcattgtgaggcaaag
gcgtcaccttttgtacccaaagtaggggagccctgttgtgccatgtttcctggcgatgga
aagtggcatcgggcgatggtgatgggtctgtcggaagacgtgtctgtctactttgtggac
tatggttacagcatgaaagttgaaaagaaccaccttcgatccattacagcccgactcctg
actctaccctttcaggctatttgctgctggctcacaggtgtggagcctgtggggtcagag
tggaccagtgaggccatgctgtacttcgataggctggtggatggcaagcagctttctgca
cgtgtcctttccgtcaccgatcagggttacggtttgaagctggaaagccgtgggaaggat
gtggcaactgccctcatctctgagcaactggccaaagatcctggggcgctagaagcagaa
actgtctctggacacacgcaccaagaaaaagggcaggaaaatgaccacagcccaaaacat
gcacactccaaccaggcgaccggagtcagtttggaagaaatgccaaccgaggaccggctt
ccaacgccatcaaaagcccctggtttcccagtggactggaaggcagtggagctgcctctc
aacaccccctttcagcctcgtgttgctgctatcagcggcccttctctcttctacctgatc
attcccgttcaggtggaccagcagaagcttcaggaggtgatgacagagctggccgcctac
tgctgcgacattccggcctctttgtcctccagtgtctcgtgcaaaccggctgttggagct
gcctgctgcgcccggttctctgccgacaacaactggtaccgtgcggtggtcgttgaggtc
ggcgagaatgaggcgagtgtcatctacgcagattacggcaacgctgagaaagtgccgttc
tcccgtatcctgcccatccccatgagcctgctgcagctccccttccaggtcacccggtgc
accctcaacggtaacgaacacttgcctgcaaaccttccggacctgctgttgagtggcttc
ctcgccacggtccagtccttcaatggcactgaaaacgtgctgacactcgctctgcccact
gagaacggcgggcgactcgtctccgccatgatccgggatgccccgaaggccgaggccacg
agcagtcctcgcacacccgccgcccagaaggtcgaccaaactgacgacccggcctctgct
gctgctgctgctgctgccgccgccgccgccgccgccgccgccacttcagctgcacctgag
ggcctccggtccaaatctggaacccaaaaggggcttgaaagtacagctgctgccaccggc
ccccccgtggatccagagccggaacctcagactccgcagcagaagaaaaacacgtcagct
gttgcgctcaatgatcctcagacgtcgagctgctgctgtctaaagctgaccacaaagatt
gacgacttggagcggttgatgcagcagcagctttctctcatcaaactgttggtgggacag
aaagaaattagattttaa
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