Gasterosteus aculeatus (three-spined stickleback): 120819359
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Entry
120819359 CDS
T07457
Symbol
heatr1
Name
(RefSeq) HEAT repeat-containing protein 1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120819359 (heatr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gat03009
]
120819359 (heatr1)
Ribosome biogenesis [BR:
gat03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120819359 (heatr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
Arm
TOR1L1_N
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
120819359
NCBI-ProteinID:
XP_040032618
UniProt:
A0AAQ4RP59
LinkDB
All DBs
Position
V:complement(15378859..15392403)
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AA seq
2132 aa
AA seq
DB search
MTSLAHQLKRLALPQSDPDLLTRREVASLLFHPKDAASMDRSTFYALGCTGLEELLGIEP
ALLEFQDTLFSRASLTLERSVQSREVNEKLDASISLFLARLGPYFLLRPAHKCLEWLVHR
FHIHLYNVDSLLACALPYHDTNVFVRVLQLLKIKDATNRWSWLHSLQTGGVPLSRGALIT
HCYTDLSFMDFICSLVTNAVQAYSGRLGDCSQLRVVFSFYSSTIVSSLEAVDKVSDVIIS
KLLPFVQKGLKSPLTDYRASSFMIVCQLAVKVVMEASLVDSLAAHVCRSLLGGAALTREG
LGCLTVLLQNQKEGSVGPRAFLSLSRVPALASTLQAMATNHDVAPLLRYLLPHLIHAVFS
PSPGVAQTDELGVLEAVLKSVPLTGDLDRTAARLMLEEYLGHVELSAEETSDLHRRLSPL
VRLFESRYCAAMDGLLVGHVAGVGEQRRRYLQFLSLSTCSGKHQVIGDSDTSLLLSLKHP
QPSVRVSALEHLMGVVASAQPSLDEVFVRDAVTDRLKDDVPEVVSATLKVMEVLLDVLDP
EDSVSSLLSLLHRDDSSQDDHWLPVLTEAVHLLSDPRLGKGDTELVQKAGWRLLPFLVIT
SSDELSLVSCVARSAVVCRHPLTRNWAPEFDELMKTSGDEDFVGSANERLVSTLTENLSN
MENSSRRDALEQLAQLVEQQRGSSLRARASFPVLTRTLLRCLGQLSGTQHLLTAQRVYAL
LEARLLEVIGVAGQEVVSRVAPSFSEALTLYLSSCGRPGERPDQEFSFILISLLRDFISS
LRCHDASFKGDVWWNPEKFDTNTCCYLGITCRLFGVIISGAGEGPSAASFRDLMKLLIQV
HLSEPPMLFRFLCVLWGYSSNHGDQLDVKVGAVLQTRALYVGGALLSAMPAVTLEQLVAA
DSPVVPSLLCCLTSPVREVRRAALAALQVLSEAAASPFQPITERLLKTSEEIIADPTYLS
QALGRLHDESTSLKATSMQKKMRSSITQLLQSAQTPSCPSYSACSLLGALSQVNGQSVLS
NLLPVLERLLEQSTPEGPAPLRSEARLVHLVLGKYNEAAAPLLARDQSCLDLFIRALKTS
SQPHPDMPPCQVIALEQITKPFFSALGCQSLQQQLLTVVLDVLVETSSPLVADTVSSVFK
AVTIDGQLVANELTPPERPKESMTVQQTRRSMMSQRRLQGACEGGAGVSWRRVTLILELL
QHKKKLKRAQMLVPTLFSLLARSQQARPGEQVNMEYTKQLLLSCLLNICHKLCPEGGAAG
PAPLEEDKFNVELVVQCIRTSDVPQTHHHALLLLATAAAIFPEKVLLNIMPIFTFMGANI
MRLDDAYSFRVIDRTVQMVIPALIQAHQLADGSSPSHVVAVVTRILHVFADALPHVPDHR
RLPILSQLMTTLGPERFLWVLMLILFKLHATQTARSTSEKDVALEKDVDFWISLSCRFDV
TDQLTTIINILHFLLQLPDDRDAAPVKRRAGPTKKKTEEEEVEEVQELIFSLESHSSKEL
RHFKFLSLSFMAQLLGSASFVGKVADEVDAVDESLQQRLLEEVLRYVHSVARCVEDNTDR
PTAKFWRVLLNKAYEVLDKVNSLLPTDTFITVMRGLMGNHLPSVRRKAMELLNNKLQHRT
QWEEQQVTVLLQLTGDLLSIVGKGGAQGTQAEQAINRQTALYSLKLLCRSFGSDHQEAFV
PVLRHTVDIVMTTEEEKNVTGSALLCIAEAVATLKALAIPQLPRLMPAVLSALTDRKELL
TNEIYLLSAVTALQRVAETLPHFISPYLQDTTSQVCRLTRLVETSSSSSSSSTQLSARLA
SLRSSLATRLPPRVLLPTLTRCYGSMVVDRKRQLGALMSILKEHIGHMEKDQLNFHQSEL
TSFFLTALDFRAEHCQGDLQKTAEVEGHVINCLITMVMKLSEVTFRPLFFKLLDWSKSAS
GERLLTFYRLSDVIAGKLKGLFVLFAGNLVKPMSELLRQTAGSKPDEALFGSEEKTSLLL
RSVLDCLFKIFLFDTQRFLSRERADALMGPLVDQLGNTAGGDQVYQVMVTQHLVPCVGQF
CAALTDDSQWKTLNYQVLLKTRHPESKVRFSSLLVLMELASKLKENYMVLLPETIPFLAE
LMEDECEEVEQQVQKVVQEMENILGEPLQSYF
NT seq
6399 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgttggcccaccaactgaagaggctcgcgctgcctcagagcgaccccgacctg
ctgacccgcagagaggtcgcctcgctcctcttccaccccaaagatgccgcctctatggac
cgaagcaccttctacgccctcggctgcacagggctggaggagttgctggggatcgaaccc
gccctgctggagttccaggacaccctgttcagccgggcttcgctgaccctagagcgcagc
gtccaatctagggaggtcaacgagaagctggacgccagcatatcgctcttcctcgcccgc
ctcggcccgtacttcctcctcaggccggctcacaagtgcctcgagtggctggtccaccgc
ttccacatccatctgtacaacgtggacagcctgctggcctgcgcgctgccataccacgac
accaacgtcttcgtcagggtcctgcagctgctgaagatcaaagacgccaccaaccgctgg
agctggctgcatagcttgcagacaggtggcgttccgctctccagaggagctctgatcacc
cactgctacacggacctgagcttcatggacttcatctgctcgctggtcaccaacgccgtg
caggcgtattcagggcgccttggtgactgctcccagctcagggtggtcttctccttctac
tcctccaccatcgtctcctctctggaggctgtggacaaagtgtccgacgtcatcatctcc
aagctgctgccattcgtccagaagggtctgaagtctcctctgacggactacagagcctcc
tccttcatgattgtatgccagctggcggtgaaggtggtgatggaggcgagtctggtggac
tccctcgctgcccacgtctgcaggtctctgcttgggggagcggcgcttaccagggagggt
ctgggctgcctgacggtgctgctgcagaaccagaaggagggctctgtggggcccagggcg
ttcctcagcctgagccgagtgccggcgctggcctccacgctacaggcgatggcgacgaac
cacgacgtggctcctctgctgcgctacctgttgcctcacctgatccacgctgtcttcagc
ccctccccaggtgtggcgcagaccgacgagctcggcgtgctggaggccgtcctgaagtct
gtccctctgaccggagacctggaccgaacggcagcgcggttgatgctggaagagtacctc
ggtcatgttgaactctccgctgaggaaacctcggacctccaccgccgcctctcccctctg
gtccggctgtttgaatccagatactgcgccgctatggacggcctcctcgtgggtcacgtg
gccggcgtcggtgagcagaggcgtcggtacctgcagttcctctctctgtccacctgcagc
gggaaacaccaggtaatcggtgactcggacacgtcgctgctgctcagtctgaaacacccg
cagccttccgtcagggtctctgcgttggagcacctgatgggcgtggtcgcctccgctcag
ccgagtttagacgaagtcttcgtcagagacgccgtcacggaccgactgaaggacgacgtg
cctgaggtcgtgtcagccactctcaaggtcatggaggttctgttggacgtgttggatccc
gaggactcggtgtcctctctattgtcgctgctgcacagagacgattcgtcccaggacgat
cactggctgccggtgctgacggaggcggtgcatttactgtccgatccacggctaggaaaa
ggggacaccgagctggtgcagaaggctggctggcggctcctgcccttcctggtcatcacc
tcctcggacgagctcagcttggtctcctgcgtcgcccggtccgccgtcgtgtgccgacac
ccgctcacccggaactgggctccagagtttgacgagctgatgaagacgagcggggatgaa
gactttgtgggttcggccaacgaacgcctggtctccacgttgaccgagaacctgtcgaac
atggagaactcctctagacgggacgccctggagcagctggcccagctggtggagcagcag
cggggctcctccctccgggcccgggcctccttcccggtgctgacccggactctgctgcgt
tgcctgggccagctgagcgggacccagcacctgctcaccgcccagcgggtctacgcgctg
ctggaggcgcggctgctggaggtcatcggggtcgccggccaggaagttgtgagccgtgtg
gcgccctccttctccgaagccctgacgctctacctgagcagctgtgggcgaccaggtgag
cggccggaccaagagttcagcttcatcctgatctctctgctcagagacttcatctcctcc
ctgcggtgccacgacgcctccttcaaaggtgacgtgtggtggaacccggagaagtttgac
acaaacacctgttgttacctcgggatcacctgccgtctctttggtgtcatcataagcggc
gccggcgaggggccgtccgctgccagcttccgggacctgatgaagctgctgatccaggtt
cacctcagtgagccgccgatgctcttccgcttcctgtgcgtgctgtggggctacagcagt
aaccatggcgaccagctggacgtgaaggtgggcgccgtcctgcagacccgggccctgtat
gtgggcggggctctactgagcgccatgccggctgtcacgctggagcagctggtcgccgct
gactcgcccgtggtcccgtccctgctctgctgtctcacctctccggttcgggaggtgcgg
agggcggcgctcgccgccctgcaagtcctttcagaggctgccgcttctcccttccagcca
atcacagagaggctcctgaagacctcagaagagatcatcgctgacccgacgtacctgagc
caggctctggggcgactccatgacgagtcgacgtccctcaaagcgacgtccatgcagaag
aagatgcgctcctccatcactcagctgctgcagagcgcccagacccccagctgcccctcc
tacagtgcctgcagcctgctgggagctctgagccaggtcaacggacagtccgtcctgtcc
aacctgctgcccgtcctggagcgcctcctggagcagagcacccccgagggccccgccccc
ctgcgctccgaggcccgcctggtgcacctggtcctggggaagtacaacgaggcggcggcc
cccctgctggcaagagaccagagctgcttggacctgttcatcagggccctgaagacctcc
agccagccccaccccgacatgcccccctgccaggtcatcgccctggaacagatcaccaag
cccttcttctcagcactggggtgccagtcgctgcagcagcagctcctgacggtggtgttg
gacgtgctggtggagaccagcagtcctctggtggccgacaccgtcagcagcgtcttcaag
gcggtgaccatcgacgggcagctggtggccaatgagctgactccacccgagagacccaaa
gagagcatgacggtgcagcagacccggcgtagcatgatgagtcagaggaggctccagggg
gcctgtgaggggggggcgggcgtgtcgtggaggagggtcacgctcatcctggagctgctg
cagcacaagaagaagctgaagagagcccagatgttggtcccaactctgttctccctgctc
gccaggagtcagcaggctcgtcccggcgagcaggtcaacatggagtacaccaagcagctg
ctgctcagctgtctgctcaacatctgtcacaagctgtgtcctgaagggggcgccgctggt
cccgcccccctggaggaggacaagttcaacgtggagctggtggttcaatgcatcagaacc
tctgacgtgccccagactcaccaccacgccctgctgctgctcgccaccgccgccgccatc
ttccctgagaaggtcctgcttaacatcatgcccatcttcaccttcatgggtgccaacatc
atgcgcctggacgacgcctacagtttcagagtcatcgacaggacggttcagatggtgata
ccggctctgatccaggcccaccagcttgcagacggcagctctccctctcacgtggttgcc
gtggtaactcggatcctccacgtctttgccgacgctcttcctcacgtccccgatcaccgg
cggcttcccatcctcagtcagctgatgaccacgctgggccccgagcgcttcctctgggtc
ctaatgctcatcctattcaagctgcacgccacgcagactgccaggtccaccagcgagaag
gatgtggctcttgagaaagacgtggacttctggatttctctcagttgtcggttcgacgtc
acggatcagctgaccaccatcatcaacatcctgcacttcctgctgcagcttcctgacgac
agagacgccgctccggtgaagcgccgggcaggacccacaaagaagaagacggaggaggag
gaggtggaggaggtgcaggagctgatcttcagtctggagagccacagcagcaaagagctg
aggcacttcaagttcctctcgctctccttcatggctcagctgctcggctcggccagcttc
gtggggaaggttgcggacgaagtcgatgccgtggacgagtctctgcagcagaggctgctg
gaggaggtgctgcgctacgtccacagcgttgctcgctgcgtggaggacaacacggaccgg
cccaccgccaagttctggagggttctgctcaacaaagcctacgaagtcctggacaaggtg
aactccctgttgcccacggataccttcatcacggtgatgagggggctgatgggtaaccac
ctgccctccgtcaggaggaaggccatggagctgctgaacaacaagctgcagcaccgcacc
cagtgggaggagcagcaggtcactgtgctcctacagctgaccggcgacctcctgagcatt
gtgggtaaaggcggcgcccaggggacgcaggcggagcaggccatcaaccgccagacggcg
ctctacagcctcaagctgctctgtcgcagtttcggcagcgaccaccaggaggcgttcgtg
cccgtcctgcggcacacggtggacatcgtcatgacgacggaggaggagaagaacgtgacg
ggcagcgctctgctctgcatcgccgaggccgtcgccacgttgaaggccctcgccatccca
cagttaccaaggttgatgccggcggtgctcagcgcgctgacggacaggaaggagctgttg
accaatgagatctacctgctgagcgccgtcaccgccctgcagcgcgtcgcggagacgctg
cctcacttcatcagcccgtacctacaggacaccacctctcaggtgtgtcggctgactcgg
ctggtggagacttcctcgtcctcttcctcctcctccactcagctgtctgctcgtctggcc
tccctcaggagctccctcgccacccggctgccccccagggtcctactgcccaccctcacc
aggtgctacggcagcatggtggtggacaggaagcgtcagctgggggcgctgatgagcatc
ctgaaggaacacattggtcacatggagaaagaccagctcaacttccaccaatcagagctc
acctccttcttcctcactgccctggacttcagagccgaacactgtcagggcgatctgcag
aagacagcggaggtcgaaggtcacgtgatcaactgcctgatcaccatggtgatgaagctg
tcggaggtcacgtttaggccgttgttcttcaagctcctggactggagtaagtcggcgagc
ggcgagcggctgctgaccttctaccgcttgagtgacgtcatcgccgggaagctcaaagga
ctcttcgtcctgttcgctggaaacctggtgaagccgatgtcagagctcctgagacagacg
gccgggtccaaaccagatgaggcgctgtttggctctgaggagaagaccagtctgctgctc
cgctccgtgctcgactgtctctttaagatcttcctgttcgacacccagaggttcctcagc
agggagcgggccgacgccctgatgggcccgctggtggaccagctggggaacaccgcagga
ggagaccaggtgtaccaggtgatggtgacccagcacctggttccctgtgtgggtcagttc
tgtgcagcgctgactgacgactcgcagtggaagaccctcaactaccaggtcctcctgaag
accagacaccccgagtccaaggtgcgtttctcctctctgttggtgctgatggagttggcg
tccaaactgaaggagaactacatggttcttcttccagagacgatccccttcctggctgaa
ctgatggaggatgaatgtgaggaggtggagcagcaggtccagaaggtggttcaggagatg
gagaacatcctgggagaaccgcttcagagctacttctaa
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integrated database retrieval system
