Gasterosteus aculeatus (three-spined stickleback): 120819373
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Entry
120819373 CDS
T07457
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gat03041
]
120819373
Enzymes [BR:
gat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120819373
Spliceosome [BR:
gat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120819373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Motif
Other DBs
NCBI-GeneID:
120819373
NCBI-ProteinID:
XP_040032637
UniProt:
G3NDN9
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All DBs
Position
V:9428698..9434770
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AA seq
747 aa
AA seq
DB search
MCGPLVVCVMSDGGIPGEPNTRPESEECPADDAFGFGDDLELNPFDGLPFSSRYYELLRE
RQTLSVWEARCEFEEALVNSQLVVVSGTAQTGRSTQIPQWSAEFCLSAKYQHGMVVCTQS
SAQSAVDLALRVADEMDVNIGHEVGYAIPLENCCSSDTILRYCTDHVLLREMMSDPFLEH
YGVIVIDQAHERTVSTDVLLGLLKDILLQRPELRVVVLAVPPATDKLVSHYHGVPLITLE
ASPPAEDVHSNSGNKDYFFSALRLALEIHRTKEEGDVVVFLASADEVRCAHSILQREGTR
LGAELGQMVPVVLCPRRGGIPPGPPGSKRSRRVFLSTKQGEDMWWATESVNFVIDTGVQK
KMVYNPRIRANSEVLQPISQYQADIRRRLCGPTGKCFCLYQEDGQLPAENPAQILESNIT
PTVLFLKRMEIAGLGQCDFIERPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEIPLE
PQMAKALLASCEFDCVSEMLTIAAMLSATSCFLEPPVGRSHEAVQCHRKFQHPEGDHFTL
INIYNAFKQSQREPYFTTEKWCQDYFLDHSALKEAEAIRSELTETLNRIELPISEPFFGT
KTNTHNVKRALLAGFFMQIARDVDGSGNYFILTHKHMAQMHPLSSYGPQSHKLGLPEWVV
FHEYTLSQNNHMRTVSEISPQVYIQMAPMYFFYNLPTSESKDMLQDMLNPEGSRKRGDGK
QNASTIGGDADAGCAVVSQTYDRCVIQ
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggacccctcgttgtatgcgtcatgtctgatggagggattcccggcgagccaaac
actcgcccggaaagcgaggaatgccccgcggatgatgcgtttggcttcggagatgatctg
gagttaaatccattcgacggcttgcccttttcctcccgctactacgagctgctgcgggag
aggcagactctgtccgtgtgggaggccaggtgcgagtttgaagaggctctggttaacagc
caactggtcgttgtgtccgggacggcgcagactgggaggagcacgcagatccctcagtgg
tctgccgagttctgcctctccgccaagtaccagcacggcatggttgtgtgcacgcagagc
agcgcacagagcgccgtggatctggccttgcgcgtggccgacgaaatggacgtcaacata
ggccacgaagtgggctacgccatccctctggagaactgctgctcctcggacactatcctg
aggtactgcaccgaccatgtgctgctgagagagatgatgtcggacccttttctggagcac
tacggggtcatcgtcatcgaccaggcccacgagaggacagtgagcactgacgtactgctg
ggtcttctgaaggacatcctgctgcagaggcctgagctcagagtggtggtcctcgccgtc
ccgcccgccaccgacaagctggtgagccactaccacggcgtcccgctcatcacgctggag
gcctcgccacccgctgaggacgtccacagcaacagcggcaacaaggactacttcttctca
gcgctgagactggcgctggagatccatcgaaccaaagaggagggagacgttgtcgtgttt
ttggcctccgccgacgaggtccgttgtgcccacagcatcctccagagagaaggcaccagg
ctgggagccgagctcggccagatggtccctgtggtgctgtgcccccggcggggagggata
ccgcctgggccaccgggctccaagaggtccaggagggttttcctctctaccaaacagggg
gaggatatgtggtgggccacagagtcggtcaacttcgtcatcgacacaggagtccagaag
aagatggtgtacaatccaagaataagagccaactctgaggttcttcaacccatcagtcaa
tatcaggcagacatacgcaggcggctctgtggaccaactggcaaatgtttctgcctgtat
caagaagacggacagctccctgcagagaacccggcacagattttggagtccaacattact
ccaactgtccttttcctaaaaaggatggagatagccggccttggacagtgcgatttcata
gagcgaccagatcccgagggtctcatgcaggcgttggaggagctcgattacctcgcagct
ttagacgacgatggcaacctgtctgagattggcatcatcatgtctgagatccccctggag
cctcagatggccaaagcgctgctggcatcttgcgagtttgactgcgtgagcgagatgttg
acaatcgcagcgatgctttcagccacaagctgcttcctggagccacctgttggtagaagc
cacgaggcggtccagtgtcacaggaagttccagcaccctgaaggcgatcacttcaccctc
atcaacatctacaacgccttcaaacaaagccagagagaaccatacttcactactgaaaag
tggtgccaggactatttcctcgatcattctgccctgaaggaagccgaggccattagatca
gagttgaccgagaccctaaacaggatcgagcttcccatctctgagcccttcttcggaacc
aaaaccaacacccacaacgtcaaaagagctctgctggccggtttcttcatgcagatcgca
cgagacgtggacgggtctggaaactacttcattctgacacacaagcacatggctcagatg
catcctctgtccagctacgggcctcagtcacacaagctggggctgccggagtgggtcgtt
ttccacgagtacaccctgtcccagaacaaccacatgagaacggtgtctgaaatctctcca
caagtgtacatccaaatggctcccatgtacttcttctacaatctgcccaccagtgaaagc
aaagacatgctacaagacatgttgaacccagaaggatccagaaaacgcggagacgggaaa
caaaacgcctccacgatcggcggcgatgccgacgccgggtgcgcggtggtgtcacagact
tatgacagatgtgtgattcaatga
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