Gasterosteus aculeatus (three-spined stickleback): 120819424
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Entry
120819424 CDS
T07457
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03020
RNA polymerase
gat04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120819424 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
120819424 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120819424 (polr3a)
Enzymes [BR:
gat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120819424 (polr3a)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
120819424 (polr3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Bac_DNA_binding
Motif
Other DBs
NCBI-GeneID:
120819424
NCBI-ProteinID:
XP_040032758
UniProt:
A0AAQ4QHU0
LinkDB
All DBs
Position
5:complement(10147432..10162116)
Genome browser
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTKHTPLAYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKATIGILQMICKTCSSIMLTKE
EKLQFMDFLKRPNLPYLQKRGLKKKISDKCRKRTICLNCSAFNGPVKKCGLLKIIHEKYK
TTKKVVEAFVSEFLQSFDTAIEHNKVVEPLLTKAQENLNPLVVLNMFKRIAQEDIPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANLELMRKLVRNGPELHPGANF
IQNRHTQMKRFLKYGNREKIAQELRFGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFERAKACQIVASILVGQDERVKVSLPRPAIMKPMALWSGKQI
FSLILKPNKDCPVKANLRTKGKQYCGKGEDLCSNDSFVVIHNSELMCGSLDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKHDLLDEG
YKKCDEYIEALDTGKLQQQPGCTAEETLEALILKELSVIRDRAGSACLRELDKSNSPLVM
ALCGSKGSFINISQMIACVGQQAISGSRVPNGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPADMEGKDEPLEFSRVLDNIRAIHVCSDEPALSQNELVLTADAITKRVDFLC
CKDIFLEALTDTGSEKYLEEMKKFIKSISEKIKKTRDKYGINDNGTSEPKVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKNISTPIITAHLDVEDDADFGRLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENNKSSMYYV
LQSLKQELPKVVVQGIPEVSRAVIHIDEQSTKTIYKLLVEGDNLRAVMATHGVNGSRTTS
NNTYEVEKTLGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADR
DPTPVKRPLLFDSADFHIPLIT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagtttagagagacagatgtggccaagaaaataagccacatctgcttt
gggatgaaatcggctgaacagatgcgtcagcaggcccacatccaggtggtcagcaagaat
ctgtacagccaagacaccaaacacactcctctagcctacggagtgctggaccaccgcatg
ggcaccagtgagaaagacaggccgtgtttgacatgtgggaagaatctggcagattgcttg
ggacattatggctacttggatctggagctgccgtgttttcatgtcggctattttaaagcc
acaataggaatcttacagatgatttgtaagacatgctcaagcataatgctgacgaaagaa
gagaaactgcagttcatggatttcttgaaaaggccaaatctgccctacctgcagaaacga
gggttgaaaaagaagatctccgataaatgtcgcaaaaggacaatctgtctgaattgttca
gctttcaatgggccagtgaagaagtgtggtcttcttaagatcatccacgagaagtataaa
acaaccaagaaggtggtggaggcctttgtgtcagagtttctccagtcctttgacactgcg
attgagcacaacaaagtggtggaaccgttgctgaccaaagcacaggaaaacctgaaccct
cttgtggtgctgaacatgttcaagaggattgctcaagaagacatccccttgctgctgatg
aacccggaggcagggaagcctgcagacctcattctcacccgcctcctggtgccgccgctc
tgcatacgaccctctgtggtcagcgacctgaagtcgggcaccaacgaggatgacctcacc
atgaagctcacagagataatcttccttaacgatgtcatcaaaaagcatcgtatgaccggg
gcgaagacacagatgatcatggaggactgggacttcctccagctgcagtgtgctctttac
atcaacagcgagctttctggcatcccgctcaacatggcacctaagaagtggaccagaggc
ttcgtgcagagactcaaggggaagcaaggtagattcagaggaaacctctctgggaaaaga
gtggacttctccggcagaactgtaatttcccccgacccaaacctgaggatcgacgaggtg
gccgtccccgtgcatgtggctaaaatcctcacgtacccagagaaggtgaacaaagccaat
ttggagctaatgaggaaactggtccgcaacggtcctgagcttcatcccggagccaacttt
atccagaatcgtcacacgcagatgaaaaggttcttgaaatatggaaaccgtgagaagatc
gctcaggagctgaggtttggcgatgtggtggaaaggcacatgatagacggagacatcgtc
cttttcaatcgacagccctccctgcacaaactcagcatcatggcccacatcgccagagtc
aaacctcacaggacgtttcggttcaacgaatgtgtgtgcacgccgtacaatgccgacttc
gacggcgacgagatgaacctccatctacctcagacggaagaagccaaagccgaggccctc
gtcctgatggggacaaaagcaaatctcgtcacgccgagaaatggcgaacctctgattgct
gccattcaggactttctgacaggcgcttacctcttgacgctgaaggacaccttcttcgaa
agagcaaaagcctgtcagatagtcgcgtcaatccttgtgggccaagatgaaagagtcaag
gtctctctcccccgcccggctatcatgaagccgatggctctgtggtcgggcaaacagatc
ttcagcctcattctgaagccaaataaggattgtccagtcaaggccaacctgcggaccaag
ggcaagcagtactgtggcaagggagaggatctgtgttccaacgactcgttcgtggtgatc
cacaacagtgagctgatgtgtggttctctggacaagggcaccttgggctccggctccaag
aacaacatcttctacatcctgctgagagactggggacagctggaggcggcgaacgccatg
tctcgcctggcgagactcgctccggtgtatctctccaaccgcggtttttccattggcatt
ggtgacgtgacacccggccagggtctgctgaaggccaaacacgacctgctggacgagggt
tacaaaaagtgcgacgagtacatcgaagctctagacaccggcaagctgcagcagcagccg
ggatgcacagcggaggagactctggaggcgctcatcttgaaagagctgtccgtcatcaga
gatcgagccggtagcgcctgcctccgggagctcgacaagagcaacagccccctcgtcatg
gctctgtgcggctcgaaggggtctttcattaacatctcccagatgattgcctgtgtgggc
cagcaggccataagtggctctcgagtacccaatggatttgagaatcgctccctacctcat
tttgaaaagcactcaaaactgcctgctgctaaaggctttgtggccgacagcttctactct
ggcctgacacccaccgagttcttcttccacactatggccggtcgggagggtctggtggat
actgcagtgaaaactgcagagacgggatatatgcagaggcgtctggttaagtccctggag
gatttgtgctcgcagtacgacctgaccgtacgcagctccaccggcgacatcatccagttc
atttatgggggggacggtctggatccagctgacatggagggaaaggatgagccgctggag
tttagtagagtcctcgacaacatccgggcgatacacgtgtgttcggacgagcctgcgctc
agtcaaaacgagctggtcctcacagccgatgccatcaccaagagagtggacttcttgtgc
tgcaaagacatcttcttggaggcgttaactgacacaggctcagagaaatacctggaggag
atgaagaaattcatcaagagcatctcagaaaagatcaagaagaccagagacaagtacggc
atcaacgacaacggcaccagcgagccaaaagttctctatcagctggaccgcataaccccc
acgcagctggagaagtttcttgaaacatgcagagacaagtacatgagggcgcagatggag
ccgggctcggcggtcggggctctgtgtgcccagagcatcggggagcccggtactcagatg
accctgaaaaccttccactttgccggtgtggcgtccatgaacatcaccctgggagtgcct
cgcatcaaagagatcatcaacgcctccaagaacatcagcacccccattatcacggctcat
ctggatgtggaagacgacgctgacttcggccggctggtgaagggaaggattgagaagact
cttctcggagagatttctgagtacatagaggaggtctttctaccggacgattgtttcatc
ttggtgaagttgtccctggagagaataaggctgctgcggctggaggtaaatgcagaaacg
gtgcgttactccatctgcatgtcgaagctacgggtgaaacccggagacatcgctgtgcac
ggcgaggcggtggtgtgcgtgtccccgcgagagaacaacaaaagctccatgtactacgtg
ctgcagtctttgaaacaggaacttcctaaggtggtggttcaaggaatacctgaggtttcc
cgagccgtcattcacattgacgaacagagcactaagaccatttataaactgctggtggag
ggggacaacctgagggctgtcatggcaacgcacggcgtgaacggaagcaggaccacttcg
aacaatacatacgaggttgagaagacgttgggtattgaggcggcgagatccaccatcatc
aatgagatccagtacaccatggtgaaccatggaatgagcatcgaccggcgccatgtcatg
cttctagcagatctcatgtcttacaagggggaaatactgggaattacccggttcggttta
gccaaaatgaaggagagtgtcctgatgctggcctcctttgagaaaacagccgaccacctc
ttcgatgccgcctactttggacagaaggactccgtctgcggtgtgtctgagtgcatcatt
atggggattccaatgaacatcgggacgggactgtttaaactgctgcacaaggccgacagg
gatcccactccagtgaagaggcctctcctcttcgacagcgcagacttccacatacctctg
atcacatag
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integrated database retrieval system
