Gasterosteus aculeatus (three-spined stickleback): 120819539
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Entry
120819539 CDS
T07457
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120819539
Cell adhesion molecules [BR:
gat04515
]
Immunoglobulin superfamily
DSCAM family
120819539
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
fn3_2
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
120819539
NCBI-ProteinID:
XP_040032977
LinkDB
All DBs
Position
I:9409308..9486571
Genome browser
AA seq
2081 aa
AA seq
DB search
MWLVTLLLLYSLQEVNSEDVVSPRLYFVNASLQRVTFSSSVGVSLPCPAGGAPHAALRWY
LAAGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSIIHDNEYFCTAENQAGKIRSPSIHIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPPAVQEYVSVVSWEKDTVSIVPGNRFFLTSFG
ALYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESTPSVLDSFQSGEVQVG
HSVELPCIASGYPNPTIRWLKDGRPLPADSRWTRRITGLTVSDLRLEDSGNYICEVTNSF
GSKEVTGHLNVIEPLRVTLSPKNLRTGISSTVILSCAVQGSPHFTVSWYRNTESVLPDQH
FSIQGAHNETLFISAAQKRHSGAYQCFATRKCQTAQDFSIILLEDGTPRIVASFSEKVVV
PGEPFSLMCAAKGAPPPTITWTLDDEPVARDLSRVRTSQYTLSDGSTVSHVNISSPQIRD
GGVYRCAARNSAGSAEYQARINVRGPPRIRPMKNITAVAGRNSFINCRVIGYPYYSINWY
KEGLLLPDNHRQVVYENGTLKLSDVQKGMDEGAYVCSVLIQPQLFITQTVYITVKVPPLI
QPFDFPPTSIGKLMYIACVVSSGDMPIRIAWRKDGQEIVPSSGITIDTKEFMSSLQISKV
SLKHNGNYTCIASNAAATVSTERQLTVTVPPRFVVQPNNQDGIYGKAGILNCSVDGYPPP
KVMWKHAKSALAGIGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEEDRGFYLCQASNGVGS
DISKSMVLTVKIPAMITSHPNTTMAKKGHLKELNCTARGEWPIIIRWERGDTVIDPDRNP
RYSITTSPNEKTDEVLSTLKLKPAEREDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPEL
EVREVKDRSMNLRWTQRFDGNSVITSYDIEYKNKTDSWELKHATRNISPTNNQANIVDLH
PASVYSIRMYSYNAIGKSEASKELTISTEEAQPDGPPMEVILQPVTSQSIRVTWKAPRKE
LQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAG
TGPSSSEINATTLEDVPSQPPQTVRAISVTSDEAVITWAEPPRMTLHGVLKGYRVVFWTV
FPDGEWGEMQNITTIKEQVELRGLEKFTNYSIQVLAYTQAGDGVRSNVLYIQTREDYPGP
PAGIKTVPSSASSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPLPSEYEVNPELLFYRIT
HLNHRQQYLIWAAAVTTAGRGNFSDKVTVEPAAKAPAKILSFGGTVTTPWMKEVRLPCSS
VGEPTPTIKWTKDSEDTAIPVSLDGQRLILANGTLVQRSVKAEDSGYYTCTATNTLGFDT
IIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWKDVFI
SSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDQPVFTHINS
SHARLNLQGWASGGCPISAVTLEFRPEGTWAWQHVRTNATTDVFLAELREATWYELKMKA
CNSAGCGNQSSQFATLDYDGSTIPPIKSPLEKNDDVKKLFSIGCPVILVTLGVALLFIIR
KKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIK
QIGEDKATIPVTDTEFNQTGNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKS
VKSAHSIRNRYSSQWTLTKCHASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDK
GRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNDNAD
SMTSMSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRAKSDYCNLPLYMKSDPFFRKQ
PEHHDPCPVVPPREASIRGLAQRAYHTQGRHVTMDSAKQQALTMGHSGLSSLTSSGGATG
GCGGSSGGASASSSSSTLPQRTLTMPGSSSSVAQCAAAAAATAAAAAALSSGATGGTPGG
ASSKMGGSRDSLLESSSSGLGRLQKQRDGGAGAYSKSYTLV
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttacttctgctgtattctttgcaagaagtcaacagtgaggatgtt
gtctctccgcggctgtattttgtgaacgcctccctgcagcgggtgaccttctccagctcg
gtgggggtgtccctgccctgccccgcgggcggcgccccccatgccgccctgcgctggtac
ctggctgccggagacgacatttatgacgtgccccatatccgccacgtgcatgccaacggt
accctccagctctacccattctccccatcagcctacaacagcattatccacgacaacgag
tacttctgcactgcggagaaccaagcaggcaagattcggagccccagcattcacatcaaa
gcagtgttcagggagccctacacagtccgcgtggccgaccagcgctccatgcggggtaat
gtcgccgtgttcaagtgcctcatccccccagccgtccaggagtacgtcagcgtggtgtcc
tgggagaaagacaccgtctcaatcgtcccaggtaaccgttttttcctgacctcttttggc
gcactgtatatctccgaggtgcagaaggaagatgctctgtccacctaccgctgcatcaca
aagcacaagtacagtggagagactcgccaaagcaatggagccaggctctctgttatggac
cctacggagtccaccccgtcagtgctggacagttttcagtccggagaggtacaagtgggg
cacagcgtggagctgccctgcatcgcttccgggtacccaaaccccaccatccggtggcta
aaggacggtcggccattgcccgcagactcccgctggacgcgtcgcatcactggcctcacc
gtttcagatttgaggctcgaggacagtggcaactacatctgcgaggtcaccaacagcttt
ggatccaaagaggtgacgggtcacctcaacgtcatagagccactgcgggtcaccttgtct
cccaagaacctcaggacggggatcagcagcacagtcatcctgtcctgcgctgtccagggt
tccccgcactttacggtgtcttggtaccgtaacacagaatccgtgctgcccgatcagcac
ttttccatccagggggctcacaatgagacgttgttcatctccgctgcacaaaagagacac
tcaggagcttaccagtgctttgccacgcgcaaatgccagactgcccaagacttctccatc
atactactggaagatggcacaccccgcatcgtcgcctccttcagcgagaaggtggtggtc
ccgggtgaacccttttccctgatgtgcgctgccaaaggagcccctccgcccaccatcacc
tggaccctcgacgacgagcccgtcgcccgggacctgtcccgcgtcagaaccagccagtac
acgctgtcggacgggagcaccgtgagccacgtcaacatcagcagccctcagatccgcgac
ggaggagtgtatcggtgcgccgcacgaaactcggccggtagtgccgagtaccaagcgcgc
ataaacgtaagaggtcctccgaggatccggcccatgaaaaacatcactgcagtggcggga
agaaactctttcataaactgccgtgtgattgggtacccttattattcgataaactggtac
aaggaggggcttctgctgcctgacaatcaccgccaggtggtctatgaaaatggaactctg
aagctgagtgacgttcagaaggggatggacgagggggcctatgtctgcagcgtgctcatc
caaccccagctctttatcacgcagaccgtctatattaccgtcaaagttcctccactgatc
cagccgtttgacttcccgccgacttccattggcaaactgatgtacatcgcctgcgtggtg
tcgtccggggacatgcccatacgcatcgcgtggcgcaaggacgggcaggagatcgtgccc
tcttctggcatcaccatcgacacaaaggagttcatgagctctctccagatatccaaggtg
tcgctcaaacacaacggcaactacacctgcatcgccagcaacgccgccgccaccgtcagc
acggagaggcagctcacggtcacagtgcctccaaggtttgtggttcagcccaataatcag
gacgggatctatgggaaggctggcatcctaaactgttcagtcgacggataccctcctcct
aaagtcatgtggaagcatgccaaaagtgcactagcgggtattgggaatccacagcagtac
caccctgtgcctctgacgggccgcatccagatcatgagcaacggctctctgctcatcagg
catgttttggaagaagatcgtggattttacctctgccaggcctccaacggcgttggctca
gacatcagcaagagcatggtcctcaccgtcaagatcccagctatgatcaccagtcacccc
aacaccaccatggctaagaagggtcacttaaaggagctgaactgcacagccaggggagaa
tggcccatcatcatccgctgggagagaggcgacacggtcattgaccctgatcgcaacccc
cgatactctatcaccaccagtcccaacgagaagacggacgaagtgttgtctacactcaag
ctaaagccagcagagcgtgaggattcggttttcttctcctgtcatgccattaactcttat
ggagaaggacgtggccttatccagctcactgtgcaagagcccccagaccctccagagctg
gaggtgcgtgaagtgaaagaccgcagtatgaatcttcggtggacacagagattcgatgga
aacagcgtcattacctcttatgatattgagtataagaacaaaacagattcctgggagctg
aagcatgccactcgaaacatctcccccaccaacaatcaggcgaacatagtggacctgcac
cccgcctctgtctacagcattcgcatgtactcctacaatgcgataggaaaaagcgaggcc
agtaaagaactcaccattagcacagaggaagcacagccggacggtcctcctatggaggtg
atcctgcagccggtaacctctcagagtatcagggtcacctggaaggctccgaggaaggag
ctgcagaatggggtgatccgcggttaccagatcggttacagagagaatgggccgggcagt
aacggccagtacagcattgtggagatgaaggccactggggacagtgaggtctacacactg
gacaacctgaagaagtttgcccagtatggtgtggtggtccaggccttcaacagagctggc
acaggaccctctagctcagagatcaatgcaacgacactggaagatgtgcccagccagccg
cctcagaccgtccgggccatttctgtgacgtcggacgaggcagtgatcacatgggccgag
ccccccaggatgacgctgcatggcgtgttgaagggctaccgtgtcgtgttctggaccgtc
tttcctgatggagaatggggggaaatgcaaaacatcacaaccatcaaagagcaggtggag
ctcagaggcttggagaagtttaccaactacagcatccaggttctggcgtacacccaggcc
ggagacggtgtccgtagcaacgtcctgtacatccaaacccgggaagactaccctggaccc
cccgcaggcatcaaaactgtgccctcctctgccagcagtgttgtggtgtcctggttacct
ccacacaagccaaatggaatcatccgcaaatacaccatctactgctccagcccgggctct
ggccaaccactgcccagtgagtacgaagtcaacccagagctgcttttctacagaatcact
cacctcaaccacaggcagcagtacctgatctgggctgcagcggtcaccactgcaggccgg
ggcaactttagtgacaaggtcactgtggagccagcagccaaggccccagctaagatcctg
tccttcgggggcacagtgaccactccctggatgaaggaggtgcgactgccctgtagctca
gtgggagaacctacacccactattaaatggaccaaagacagtgaggacacagccatccca
gtgtctcttgatggacaacgtctcattctggccaatgggacgctggtgcagcgctctgta
aaagctgaagattctggttactacacctgcaccgcaaccaacacgctggggtttgacacc
atcatcgtcaacttattggtacaagtccccccagaccagcctcgtctgaccgtttccacc
acctccacctcctccatcacgctggcctggataccaggagacaacggaggcagctccatc
aggggttttgtgctgcagtactctgttgacaacacagaggagtggaaagatgttttcatc
agttctagtgaacgctccttcaaattggacaacctgcgctgcggcacctggtacaaagta
aagctggctgcaaagaacagtgttggggccggacgcatcagcgagatcattgaggcaaag
acgcacgggcgagaaccccagttcaacaaggaccagccagtcttcacccatattaattcc
agccacgcccgcctcaacctgcagggttgggccagcggaggctgtccaatcagcgctgtt
actctcgagtttagaccagaaggtacatgggcgtggcagcatgtgcggaccaatgccacc
acagacgtgtttctggcagagctacgcgaggcgacctggtacgagttgaagatgaaggcc
tgtaacagcgctggctgcggcaaccagagctcccaatttgcaacactggactatgatggc
agcacgattcctccaatcaaatctcccctggaaaagaacgatgatgtcaagaagctgttt
tcgattggctgtcctgtgatcttggtcacgctaggtgtcgcgctgctcttcatcattcgc
aagaaacgcaaagaaaagagactgaagagactaagagatgccaaaagcctggcagagatg
ttgatcagtaaaaacaaccgcagctttgacaccccagtgaagggacctcctcagggcccc
cggttacacattgacatcccccgagtgcagctgctgattgaagacaaagaaggcatcaag
caaatcggtgaggacaaagccactatccctgtgacagacactgagttcaaccaaactggc
aaccctcagagcttctgcacgggtgtgtccgtccatcaccccgccctcatccagaacacc
ggccctttgattgacatgtcggacatcagaccaggaaccaacccagtgtcgaggaagagt
gtgaagtcagcccacagcatcaggaaccgctactccagtcagtggactctgaccaagtgc
cacgcctccacgccggcccgcacgctcacctcagactggcgcacagttggctctcagcac
ggcatcactgtgacagagagtgacagctacagcgccagcctttcacaagatacagataag
ggtcggaacagcatggtgtcgacagagagcgcctcctcaacttacgaggagttggcaaga
gcatatgagcatgccaagctggaggagcacctgcagcatgccaaatttgagattaccgag
tgctttatctccgatagctcatctgaccagatgaccaccggtaccaatgacaatgcagat
agcatgacgtccatgagcacaccctctgagcccggtatctgccgtttcaccgcctcgcca
cccaaaccccaggactacgatcgtggcaagaatgtagctgtgcccatcccacaccgcgcc
aagagtgactactgcaacctacccctctacatgaagtctgacccattctttcgaaagcag
ccggagcatcatgacccatgtccagtggttccaccacgtgaggcctcaatccgcggccta
gcgcagcgagcataccacacccagggccgtcatgtgactatggactctgcaaagcagcag
gccctaaccatgggccactctggcttgtccagcctcacttcctccggaggagcaaccggc
ggctgtggtggaagtagcggaggggcatccgctagctccagcagctccacgctaccccag
aggactctcaccatgcccggctcttcttcctcagtggcccagtgtgcagcggcagctgct
gccactgctgcagctgccgctgccttatcctccggcgccacgggagggactcctggaggg
gcctcctccaagatgggaggatccagagactctctgctggagagcagctcctccggctta
ggcagactacagaagcagagggatggaggggcgggggcttactccaagtcatacacactg
gtgtag
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