Gasterosteus aculeatus (three-spined stickleback): 120819540
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Entry
120819540 CDS
T07457
Symbol
bbs1
Name
(RefSeq) Bardet-Biedl syndrome 1 protein
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gat03037
]
120819540 (bbs1)
Cilium and associated proteins [BR:
gat03037
]
Primary cilia and associated proteins
BBSome
120819540 (bbs1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
BBS1
GAE_BBS1
BBS2_Mid
PHTB1_N
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
120819540
NCBI-ProteinID:
XP_040032976
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All DBs
Position
V:15306131..15309979
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AA seq
581 aa
AA seq
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MASVEPRADGGGKWLDAHYDPVAGLHTFSSCVDLADLSGDGENRLVVGDLGSGSSGMKLK
VYSGTALTSESTLLDLPAGLVAFFMDLHEPRIPAVAVASGPCVYVYKNLRPYFKFTLPGL
EVNSLEQDVWQQVREGQIDPLTLREMLESLRKTAEVPLSVRSLRFLSLEAGDMDEFVQLH
KQQPIRRQTVITCIGTLKKSTADEDGVSCLVIGTESSEVFVLDPEAFIILSKMSLPAAPT
MMDVTGQFDVEFRITAACRNGNIYILRRDFDKPKYSIELSSHPVGLVRVGKNVVVGCTDE
SLQGFTQKGKKLWKAVLTAPITTLASMDLPTRGFQAVLVGLANCEVHLYQDKNLLSTIKT
PDVVTSICFGRYGREDGTLVLTTKGGGLMVKILKRTAALDERESAPGPPASQSVRLNVPK
KTKLYVDQTLRERESGVAMHRAFQMDLSRLRLAAAKSYVVALECSLTPMSSSEPLKMNAV
VQGLGPAFKLTLNIQNTGARRPAVNLAVSFLYDEGLYHMRNPYMRIPLLVPGLVYPVETF
VECTSDKGISDIIKVFVLHEGRSSPLLTAHINMPVSEGLTL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggtggagccgcgcgccgacggggggggcaaatggctggacgctcactacgac
ccggtggctggcctccataccttctcgtcctgcgtggacctggcagacctgagcggtgac
ggcgagaaccgcctggtggtgggcgacctgggctccggctcgtcgggcatgaagctgaag
gtctacagtggcacggcgctgaccagcgagagcaccctgctggacctgcctgccggtctg
gtggccttcttcatggacctgcacgagccccgcatccccgccgtggccgtggcgtctggg
ccctgcgtatacgtctacaaaaatctgcggccgtacttcaagttcacgctgccgggctta
gaggtcaactcgctggagcaggatgtgtggcagcaggtgagggagggtcagattgacccc
ctcaccctgagggagatgttggagagcctcaggaagacggccgaagtcccgctgtccgtc
cgctcactcaggttcctctccctggaggcgggcgacatggacgagttcgtccagctgcac
aagcagcagccaatcagacggcagactgtcatcacctgcatcgggactctgaagaagagc
acggcggatgaggacggcgtcagctgcctggtgatcgggacggagagcagcgaggtcttc
gtcctcgaccccgaggccttcatcatcctctccaaaatgtcgctgccggccgctcccacc
atgatggacgtcactgggcagttcgatgtggagtttcgcatcacggcagcatgtcgcaac
ggcaacatttacatcttgcgcagggactttgacaaacccaagtacagcattgagttgtcg
tcccacccggtgggtctggtgagggtcgggaagaacgtggtggtgggctgcaccgacgag
agcctgcagggcttcacccagaaggggaagaagctgtggaaggccgtcctcacggctccc
atcaccactttggcctccatggacctccccaccaggggcttccaggcggttctggtgggc
ctggccaactgcgaggtccacctgtaccaagacaagaacctgctgagcaccatcaagaca
cccgacgtggtcaccagcatctgctttgggcggtacggacgcgaggacgggaccctggtc
ttgaccaccaagggagggggtttgatggtgaagatcctgaagagaaccgcggccctcgat
gaacgggagagcgccccggggccgccggcgtcccagagcgtccgcctcaacgtgcccaag
aagaccaagctgtacgtggaccagacgctgagggagcgcgagagcggcgtggccatgcac
cgcgccttccagatggacctgagccgcctgcgcctggccgccgccaagtcctacgtggtg
gccctggagtgcagcctgacgccgatgtcctccagcgagccgctcaagatgaacgccgtg
gtgcagggcctgggcccggccttcaagctcaccctcaacatacagaacacgggcgcgcgt
cggcccgcggtcaacctggccgtcagcttcctgtacgacgagggcctgtaccacatgagg
aacccgtacatgaggatccctctgctggtgcccgggctcgtctaccccgtggagaccttc
gtggagtgcaccagcgacaagggcatctctgacatcatcaaggtgttcgtcctgcacgag
gggcggagctccccgctgctgaccgcacacatcaacatgcccgtcagcgaggggctgacc
ctctga
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