Gasterosteus aculeatus (three-spined stickleback): 120819546
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Entry
120819546 CDS
T07457
Symbol
lrit1b
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1b
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120819546 (lrit1b)
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120819546 (lrit1b)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
fn3
Ig_2
LRR_14
LRRNT
Motif
Other DBs
NCBI-GeneID:
120819546
NCBI-ProteinID:
XP_040032988
UniProt:
G3ND14
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All DBs
Position
V:9787830..9791178
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AA seq
649 aa
AA seq
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MSRHFFAAFGLALVFLPLLSSSCPPQCSCFFHKLSDGSKARSVLCNDPEITEVPPNFPID
TSKLRIEKTSITRISSDNFHYLNSLEFLWMSFNSLNLLSVDSFRGLYNLDELRLEGNSLT
SFPWESLTDTPNLRLLDLHNNKITAVPADATVHMKNLTYLDLSSNSLATVPADVLAMWLS
VKPSQDADSSKLILGLHDNPWMCDCRLHDLVQYQKSPSSSVALIDTRLRCADPESLSGVL
FNEAELQKCQGPRVHTAVARVRSSLGNNVLLRCGTVGVPIPELSWSRADGKKMNGTVQEE
ISKEGVIWSILSVPAVAYRDSGKYICKATNFVGSADALISLVITDSIRSEEAGGGISKRT
RGKKPSGIGRAAYQEKLIARYVPPASTANQPIIQPLNSQGVTGKYEVESYSISDAASEGR
GKAPAPPRPVEMSALSNLAANASSLQQPPEKRVVRSVKVMGDTDHTVSLNWRAPTATNIT
EFSVLYAVFGERDMRRLNVAAGKNRITIDGLVPKTKYIACVCVKGLIPKKEQCVIFSTDE
AASASGTQKLINVVVITVACVIAVPLTLIVCCGALKKRCQKLLGRESKDIQDSYVTFETL
GPGNKAKGMEGEYLTRLNPDESNRLLSARSSVDSEATARTEVPPNEYFC
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgacatttttttgctgcttttggtttggctttagtttttcttcctttgctgagc
agttcgtgtcctccacaatgcagctgcttcttccacaagttaagcgacggatcaaaagca
aggagtgtactttgcaatgatccagagatcactgaggttcctccaaactttcccattgac
acatcgaagctgcgcatcgaaaagacatccatcacgcgcatttcaagcgacaacttccac
tacctcaacagcctggagtttctgtggatgtctttcaattcgctgaatctactgagtgtt
gacagcttccgaggcctttacaacctggacgagctccggctggagggcaactccctcacc
tccttcccctgggaatctctgacggacacgcctaacctgaggctcctcgacctgcacaac
aacaagatcaccgccgtccctgccgatgccaccgtgcacatgaagaacctcacctatctg
gacttatccagcaactctctggccaccgttcccgctgacgttctcgcaatgtggctgagc
gtgaagccgtctcaggacgcagattcctccaagctaattctcggtctccacgacaacccg
tggatgtgcgactgccggctgcacgacctggtccagtatcagaaatccccatcgtcatcg
gtggccctcatcgacaccaggctgaggtgcgccgatccggagagcctgtcgggggtcctc
ttcaacgaagcagagctgcaaaagtgccagggccctcgggtgcacacggccgtggctcgt
gtacggagctcgctgggcaacaacgtgctgctgcgctgtggcacggtcggagtccccatc
cccgagctttcctggagccgcgctgacggaaagaagatgaacggcaccgttcaggaagag
atttcgaaggagggcgtcatttggtcgattctgagcgtgccagcggtcgcgtaccgagac
tctgggaaatatatatgcaaagccaccaactttgtgggctctgcagacgccctcatctct
ttggtgatcacggattccattcggtcagaggaagccggtggggggatctccaagagaacc
agagggaagaaacccagtggcattggcagagcagcataccaggagaaactcattgccaga
tatgtacctccagccagcaccgccaaccagcccatcatccaacctctcaacagccaaggt
gtgactgggaagtatgaggtcgaaagctacagcatctccgacgctgcttcagagggaagg
ggcaaggctccagcccctccgaggccggtggagatgagcgctttgagcaacttagcagcc
aacgcctcgtccctccagcagcctccggagaaaagggtggtgcgctcggtgaaggtgatg
ggcgacaccgaccacaccgtctctctcaactggcgggcccctacggccacgaacatcacc
gagttcagcgtcctgtacgctgtatttggcgagagagacatgcgtcggctcaacgtggcg
gccggaaagaatcggatcaccatcgacggccttgtgcctaagacaaagtacatcgcttgt
gtctgcgtcaaaggcctcatcccgaaaaaggagcagtgcgtgatcttctcgacagacgag
gcggcgagtgccagcggcacccagaagctcattaatgtggtggtgataacggtggcgtgc
gtgatcgccgtcccgctgacgctgatcgtgtgctgcggggcgctaaagaagcgctgccag
aagctgctggggcgggagtccaaggacatccaggactcgtacgtcaccttcgagaccttg
ggccccggcaacaaagccaaggggatggagggagagtacctgaccaggctaaatcctgac
gagtccaacaggctgctctcagcgaggtccagcgttgactcggaggccacagccaggact
gaagtgccacccaacgagtacttctgctaa
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