Gasterosteus aculeatus (three-spined stickleback): 120819592
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Entry
120819592 CDS
T07457
Symbol
tap2t
Name
(RefSeq) antigen peptide transporter 2 isoform X1
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat02010
ABC transporters
gat04145
Phagosome
gat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120819592 (tap2t)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120819592 (tap2t)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120819592 (tap2t)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gat02000
]
120819592 (tap2t)
Enzymes [BR:
gat01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
120819592 (tap2t)
Transporters [BR:
gat02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
120819592 (tap2t)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
AAA_22
SMC_N
AAA_30
AAA_16
Rad17
AAA_29
AAA_5
Zeta_toxin
RsgA_GTPase
AAA_33
SRP54
SbcC_Walker_B
AAA_15
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
120819592
NCBI-ProteinID:
XP_040033072
LinkDB
All DBs
Position
V:6042041..6049915
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AA seq
735 aa
AA seq
DB search
MRTRPGSEEHTMQPVRSTRTMGELAARGLFILIFDAVLSAGLWAGLVLLKCSGCGGLPGV
WAFAAVKWAFLHVFASTLTDGKPEVVLRRLVAILCLLSPVFESGRLLVRPPSQPYTGPSP
DLGTLLLGPVSAVLACVVWEKYLCGDSKLAGDDDKRNARRLLVRMLKYFKPDTFYLIAAF
CVLILAVICDAFIPLYQGKVIDMLRGQPLQTSFGYAIGQLALVSLGSSLFSGLRGGIFMC
TLARLNKRLKHLLFHTLMQQEVHFFEENNPGRLSSRLHSDVDRMGRTVALNANALVRSSV
KSCLMLAVMLGLSWELTVLTCIEMPLLAIMQNKYIAVSQELKEQIQDCQARNKELALQII
GGIRTVRSFRAEKDEMRRYNEALDQLCAVKTRADIYSSIFTLIRRLVSLGIKVVMLVQAR
ALISSGHLSLGSLVSFFLYQKPMSNNLKEIMYCFSETMSTVGVISKVFSYLDRVPKWKNE
GQLAPEELEGSIVFQNVTFTYPSAPEDKPALKSVSLALRPGKMTALVGPSGSGKTTCVSL
LKRLYEPQEGHILLDGEPLHRYEHQYLHQKMALVSQNPVLFSGSLRYNMEYGLKDCSMEK
VEEAAKKANADKFICEMENGYDTDVGECGGALSEGRRQCVAIIRALVREPRVILLDEATS
RVDVEVQHAVSEVLQEVLARGGTVLVVAHQLKTVETADHIIFMEKGAVVEEGTHRELMAK
RGRYHRLKEELFSTQ
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcggacacggcccgggagcgaggaacacactatgcaacctgtcaggtccaccaggaca
atgggggaactggcggcacgtggattattcattctcatattcgacgcggtgctttccgcg
ggactgtgggccgggctggtgctgctcaagtgctccggttgcggcgggctgccaggagtg
tgggccttcgcggccgtgaagtgggcctttctccacgtattcgcctccacgctgaccgac
gggaagccggaggtcgtgctccgcaggctggtggccatcctctgcctcctctcccccgtg
tttgaaagtggacgtctcctcgtgaggcctccctcgcagccgtacacgggaccctctccc
gacctcggcaccctgctgctgggccccgtgtccgcagtgctggcctgcgtggtttgggaa
aagtacctctgtggtgattcaaagcttgcaggggatgacgacaaacggaacgccaggcgg
ctgctcgtgaggatgctgaaatacttcaaaccagacaccttttacctgattgcagcgttc
tgtgtcctcatcttagctgtcatctgtgatgcgtttatcccactttatcaggggaaggta
atcgatatgctcagaggtcaaccacttcaaaccagcttcggttatgcaattggacagctg
gcacttgtctctctaggaagctctctgttctctggcttaagaggaggaatattcatgtgc
acgttggccagactgaacaagagactgaagcatctgctgtttcacaccctcatgcagcag
gaggtgcacttctttgaggagaacaaccctggacgcctctcctcccgcctgcactcggac
gtggacaggatgggccgcacggtggcgctgaacgccaacgcgctggtccgcagctcggtg
aagagctgcctcatgctcgcagtgatgttgggcctgtcctgggagctcactgtgctcaca
tgcatcgagatgcctctcttggccatcatgcagaataaatatatcgccgtgtctcaggag
ctgaaagagcagatccaggactgccaggctcggaacaaagagctggctctgcagatcatc
ggagggatccgcacggtccgcagcttcagggcagagaaagacgagatgaggaggtacaac
gaggctctggaccaactgtgcgccgtgaagactcgtgcagacatctacagcagtatcttc
accttaatacggaggctggtgagtctggggataaaggtagtaatgctggttcaggcccgt
gctctcatctcgtcgggtcacctcagcctcgggagtcttgtgtccttcttcttgtaccag
aagcccatgtcaaacaatttaaaggagattatgtactgcttcagtgagaccatgtcgaca
gttggagtcatctccaaagtgttcagttaccttgacagagtgccgaagtggaagaacgag
ggacagttagctccagaggagctggaggggagcatcgttttccaaaatgtcaccttcact
tatccctccgctcccgaagacaagccggctctgaagtcggtgtctctggcgcttcggccg
gggaagatgacggccctggtcggcccctccggcagcggaaagaccacctgcgtcagcctg
ctgaaaaggctgtacgagccccaggaaggacacatcctgctggacggagagccgctgcac
cgctatgagcaccagtacctccaccagaagatggccctggtttcccagaatcccgtgctg
ttctctggttcactgagatacaacatggagtacggcctgaaggactgcagcatggagaag
gtggaagaggctgcaaagaaagccaatgcagacaagtttatctgtgaaatggagaacgga
tacgacacagacgtcggggagtgtggcggcgctctctcagaagggcggaggcagtgtgtc
gccatcatcagagctctggttcgggagccgcgggtcatcctgctggatgaggccaccagc
agagtggatgtagaggtgcagcacgctgtgagtgaggtgctgcaggaggttctggctcga
ggtggaaccgtcctggtggtggctcatcagctaaagacagtggagacggcggatcacatc
atcttcatggagaagggagccgtcgtggaggaggggacgcaccgtgaactcatggccaag
agggggcgctaccaccgcttgaaggaggaactgttttcgactcagtga
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