Gasterosteus aculeatus (three-spined stickleback): 120819772
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Entry
120819772 CDS
T07457
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120819772 (mms19)
03400 DNA repair and recombination proteins [BR:
gat03400
]
120819772 (mms19)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120819772 (mms19)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
120819772 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_2
Sec7-like_HUS
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
120819772
NCBI-ProteinID:
XP_040033406
LinkDB
All DBs
Position
V:complement(4846328..4856629)
Genome browser
AA seq
1011 aa
AA seq
DB search
MRGLGASHRGAMAADSAVLLSLVEEFVSGLQDSKANDAATCVKDGQFTILELVEALGLSL
TSSQPHTRARAVQLLSQVLHDCHGALTEREVEVLLAFYENRLKDHYVITPPVLHGLRALT
KCTVLPPGSAVSMLRSLFQDVHVQSLMLGERACVYNMLINLMATREAELKGLGADFVFGF
VQSMDGERDPRNLLLAFQIARTIVLRGYDLGKFTEELFEVTSCYFPIDFSPVSPCLLCLV
LCGWRGSFLATLDISQVAGVSKYEHKDVAEFLEGLWASLRREVFQTASEKIEAAGLAALT
ALTSCLSRSVLNSDSEDSLSTFLQLVLTDCKHHLCEPDLKLVWPSAKLLQAACAASSRAS
HTVADAVMPALIEQYNGRAQCSQRRTLLEVVQRFLQSVKTCESEESVFSAFRPALCTVVF
SALTETNSSLQITAASVLTSLARHSDLLLDSDIELAVDHLTRLLLTEEDERVSLAVVECA
GALAELRSAAFITNLIPRLKKELFSEPTDQKDNSEASEKLSHHAVRQRCLSALAAVSTQP
GVVQESAPVLLEVLGSAHAGGVVFSVEEVVAACGSLRRIAERVQDTEETGRCFHDVIIPR
LLSLALQAALQGGGGSPGRRSPLLEEVVLAAMVPVISTSCSRLQPTLAGQTAARAVSLFL
DGDVSFLPDNSFPSNLQLLKTQQGDSWSQSQMVCLLLGCVCSLPRTVEAPRLDELMTELE
EMSCACSHPLSYTSAAKCFAGLANKRAAGESLDGLIQRTMKRVCSELDCPSSPARTQAFT
LMIWVAKALLLRYHPLYATLTDKLFSLLDDADLGPAAADAFLLLMSDTADILNRGCHADV
RIMYRQRFFSENSAKLVQGFNAAPQEKKPNYLKALSNIVNKLPKQVQLTELPALLSLLLE
ALLCPDHAVQLSTLSCLEPVLMEPPPALIQQLEALVGRLLALTASAVMSVRIASLRCIHS
ISCFPAHEVLPFRARVLRALSRPLDDHKRLVRREAVRARAEWFLLGSPGGS
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtctcggtgcgagtcacagaggcgcgatggctgcggacagtgccgtgctgctg
tctctggtggaggaatttgtctctggactgcaggacagcaaagccaacgatgcggcaaca
tgtgtcaaagatggacagtttacgatactggagctggtggaggcactgggactgagcctc
accagctcgcagcctcacacccgggccagagcggtccagcttctctctcaagtgctacac
gattgccacggggctctcacggagagagaagtggaggtgctcctcgccttctatgagaac
cgcctcaaggaccattatgtcatcacgccgccggttctacatgggctcagagcgctgacc
aaatgcacagtgttgccccctggctcagctgtgtccatgctgaggtctttgttccaggat
gttcatgttcagtcgttgatgctgggcgagagagcgtgcgtctacaacatgctcatcaac
ctcatggccaccagagaagccgaactcaagggtttgggcgcagactttgtgtttggtttt
gtccagtcgatggacggagagcgagaccctcgcaacctgctgctggccttccagatcgcc
aggaccatcgtcctccgaggttatgatctcggtaaattcacagaggagctgttcgaagtg
acgtcctgctacttccccatcgacttcagccccgtaagtccctgtttactctgcttagtt
ttgtgtgggtggaggggttcttttcttgccacactggacatttctcaggtcgccggtgtg
tcaaaatatgaacataaggacgtggcggagttcctcgagggactgtgggcctcactgcgg
agagaggtgttccagacagcgagcgagaagatcgaggcggctggcctcgccgctctcacc
gcactcacttcctgcctgtctcgctcagtcctcaactctgactccgaggactccctcagc
accttcctgcagctggttctcacagactgcaaacatcacctgtgcgagccggacctgaag
ctggtgtggcccagcgccaagctgctgcaggccgcctgcgccgcctccagcagggcgagc
cacacggtcgccgacgccgtgatgcccgccctcatcgagcagtacaacggcagagcacag
tgctcccagagacggactctgctcgaggtggtgcagcgattccttcagtcagtgaaaacc
tgcgagagcgaagagagcgtgttttcagccttccgtcccgctctgtgcaccgtggtgttt
tcagcgctgacggagactaattccagcctgcagatcaccgccgcctccgtcctcacctcg
ctggcgcggcacagcgatctgctgttggactctgacatcgagctggctgtggatcacctg
acccgactgctgctgacagaggaggatgagcgagtgagtctcgctgtggtcgagtgcgcc
ggagccttagcggagttgcgctcggcggctttcatcaccaatctgatcccgagactaaag
aaggagctgttttctgagcccacggatcaaaaagacaacagcgaggcttctgagaagctt
tcccatcatgcagtgcgccagcgctgtttgtcggctctggccgccgtgtccactcaaccc
ggcgttgtccaggagagcgcacctgtcctcctggaggtcctcggctcagcgcacgcgggt
ggcgttgtcttctccgtggaggaggtggtggcggcgtgcggtagcctccggagaatagcc
gagcgggtgcaggacaccgaggagacgggacggtgcttccacgacgtcatcatcccgcgc
ctgctgtctctggcactccaggctgcactgcagggcggggggggatcgcccggtcggcgt
agtcctctcctggaggaggtggtcctggccgccatggtccccgtcatcagcacttcctgc
tccaggctgcagcccacgctggcgggacagacggcagcgagggccgtgtcgctcttcctg
gacggcgacgtctcctttttacccgacaactcgttcccttccaacctgcagctgctcaag
acgcagcagggggactcgtggagccagtctcagatggtctgcctgctcttaggatgtgtg
tgttcgctgcctcgcaccgtggaggcgcctcggttggacgagctgatgaccgagctggag
gagatgagctgcgcctgcagccacccgctgtcctacacctcggctgcaaagtgcttcgct
ggcctggcgaacaagagagcagctggcgagtctctcgacggcctaattcagaggaccatg
aagagggtgtgtagtgagctggactgcccgtcttcccccgcgcgcactcaggccttcacc
ctcatgatctgggtggccaaggctctgctcctccgataccaccctctgtacgccacgctg
accgacaagctcttctcgctgctcgacgacgctgatctgggtccggcggcagcagacgcc
ttcctgctgctgatgagcgacaccgccgacatcctcaaccgcggttgccacgccgatgtt
cgcatcatgtaccgccagcgcttcttcagcgagaactccgccaagttggtgcagggcttc
aacgctgcgccgcaagaaaagaagcccaactacctgaaggccctgtccaacattgtcaac
aaactgcccaagcaggttcaactcaccgagctgccggcgctgctgtctcttctgctggag
gccttgttgtgtcctgaccacgccgtccagctgtccaccctgtcctgcctggagcccgtc
ctgatggagccccccccggccctcatccagcagctggaggctctggtcggcaggctgctg
gccctcaccgccagtgccgtcatgagcgtgcggatcgcctcgttgcgttgcatccattcc
atttcctgcttccccgcgcacgaggtgttgccttttcgggcccgagtgctgcgcgctctg
tcccggcctctggacgaccacaagaggctggtgaggagggaggcggttcgggcgcgagcc
gagtggttcctgttaggaagtcctggaggaagttga
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