Gasterosteus aculeatus (three-spined stickleback): 120819821
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Entry
120819821 CDS
T07457
Symbol
itgb4
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-4
KO
K06525
integrin beta 4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04382
Cornified envelope formation
gat04510
Focal adhesion
gat04512
ECM-receptor interaction
gat04518
Integrin signaling
gat04810
Regulation of actin cytoskeleton
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120819821 (itgb4)
04518 Integrin signaling
120819821 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120819821 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120819821 (itgb4)
04810 Regulation of actin cytoskeleton
120819821 (itgb4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120819821 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gat04147
]
120819821 (itgb4)
04515 Cell adhesion molecules [BR:
gat04515
]
120819821 (itgb4)
04090 CD molecules [BR:
gat04090
]
120819821 (itgb4)
Exosome [BR:
gat04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120819821 (itgb4)
Exosomal proteins of bladder cancer cells
120819821 (itgb4)
Cell adhesion molecules [BR:
gat04515
]
Integrins
Integrin beta subunits
120819821 (itgb4)
CD molecules [BR:
gat04090
]
Proteins
120819821 (itgb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Pur_ac_phosph_N
Integrin_B_tail
FN3_DSCAM-DSCAML_C
I-EGF_1
EGF_integrin
EGF_2
Fn3_PBP1
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
SEA
Motif
Other DBs
NCBI-GeneID:
120819821
NCBI-ProteinID:
XP_040033477
LinkDB
All DBs
Position
5:complement(4618679..4637685)
Genome browser
AA seq
1994 aa
AA seq
DB search
MQLRKEMGRWTPRLSAELGLLAVLLTCCCAQENPCFAVRAGTCSECLQAWKDCAYCPEES
FKGPRCDLYENIIAHGCSAAAALTAKSSMMIERKQPINMRLKQSQVSPQQVSMSLLPGEE
KEVDVEVFAPTKGPLDLYILMDFSNSMVDDLNNLKRMGTQLASLVKDLSDDYTIGFGKFV
DKVVEPQTDMRPSKLKEPWPNSDPPFSFQNVIKLTSDAAFFDSELQKEKISGNLDAPEGG
FDAILQAAVCGDKIGWRDNSTHLLVFSTESSFHYEGDGVNVLSGILARNDEGCHLDAAGK
YTKDTQQDYPSIPTLVRLLGKHNIIPIFAVTDHSYTYYEKLREYFPIAEIGRLQEDSSNI
LTLMRVAFESIRRKMSIRAEDKPKAFVTNFLDTSGRVVEHGAFDFKPGAIGNFKMRLSAQ
QMVGGKPVCQLEPLGKKGSIRVKPTTFNAAANVDATILCPSCECEKSAIPAAAKCHGHGD
LVCGRCQCYDGWLSTFCNCSESSAAQDTSRCLGPDMKDPCSGRGDCLECGTCVCYNPDQF
EGEYCQYDKTDCQRYGGFLCNDRGSCIRGRCACNEGWAGNACECPNSNATCLDSKGGVCN
GRGECVCGRCKCPESDMSMTSTCAPNFEAQLGVCEGTRSCVQCQAWKTGEKKDKTQCDKC
PFKIVLVDELKEEKDVAHSCSFRDEEDDCTYRYNVEDWKPDSKVKELQFQVLKKKDCPPA
SLLWLLPLLLFLLLLLALLLLCCWKYCACCKTCFQSCLALLPCCKGGRMVGFKEDEYMFR
QSLLTSDHLDTPMVRTGPPKGTDVVRWKVTDNVHRSPTHPQVLMKPNPKEIIPFPISLRL
NRLFSENLSRPDSRDAEQLRKEVADNLNEVYKQIPGAQKVQKTLFRKQKNAGKRQDFAIM
DTVLSAPRSSYPDIVKLTQKNVQSGNLHDLKVVPGYYTVATDREAAGAIEFQEGVGSVDV
HVPLFVKDEDDDKKQLQVEATDVPLGIAEIGKRFVNITIIKEHATGVFSFLQPAYTYSRG
DGVAHIPISKEIIEEGSSQVTYRTRDITAKDKKDYVAMEGDLTFGPEETQKIVPVRLLEL
SEKDGLLADKQVRQFAIDLSNPRQGAKLGRYPRTTVTIADEPDPSVMMFKKGSQNFSTTD
PTYTIPVVRTRNQDIPATVKWRTKKAQRFELSDLLKFSPGETEKNIVIDPRAHPGPIQPE
TIQLELFDPSVNATVGERKTTLVNVADGPHYKPLEMEQVQNKSAVKGGRLFSPTNLKAKA
TGPRNIRLNWDAGSGNPAGYKVKYWIYGDPEKDAQVLDVKSPQAELTDLYPYCDYEMRVC
SYNALGDGSDTDIVTCQTLEDAPGEPGRLAFNVISPTVTQVSWGEPAETNGNITAYEVIY
TPIDDDLKAVGAAKKVKIDNPKKRMLLIENLQRAQTYQYKVRAMNSIGWGPFKDASINLA
SQPTRPMSIPIIPDVPIVDAEAGDEYDGYLMYSNEVLRTPTGSKTPSVSGDGWKFVKMVG
SNLDLRKVSWKKRVDVIPSRLSTDTETSSDEVPHPSYAQTPLPDYTSNGKWDQNFLFPGG
SATRNLSSSSSPMSTVGSNYRGAGGSFTETNTTYMSAGGSQRTDMIRGGMHSSEVIMRKR
SENRSYMDENIRDSIVMGDVSGNFPDLSGFGYAGTQSSFXSQFSYSLFGGPRAXTESTDV
NDALYNLDRVLYDARLSPGIPDTPSRLVFSALGPTALKVSWQEPRCDRDLQGYCVLYQLL
NGGKMNTVNVTNPAENSVIIQDLLPNQSYLFKVKAKSQEGWGPEREGVITIESAVDPKSP
LSPMPGSPFTLSTPSAPGPLVFTALSPDSLQLSWEKPRKPNGDILGYVVTCEQLHGGGDV
RSFEVNGDTAETSLTVPNLTENIPYKFKVQARTTQGFGPEREGIITIESQDGSSLSQYNS
QSMSSREVFQMPTEVSTRMNISHTMMDPYFSDGAMMTTQHMETSGMVTRQVTKEVVQRSV
MGGTTVTKKMFYES
NT seq
5985 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcaggaaggagatggggagatggacgccgcgcctgtcagcagagctcgggctg
ctcgccgtcttgttgacctgctgttgtgcccaagagaacccctgcttcgccgtcagggcc
gggacctgttcagaatgcctgcaggcctggaaagactgtgcttattgccctgaggagagc
tttaagggccctcgctgtgacctgtacgagaacataatcgcccacggctgcagtgctgcg
gctgcactcacagctaaaagcagtatgatgatagaaagaaagcaacctatcaacatgagg
ctcaagcagtcccaagtgtctccgcagcaggtcagcatgagcctcctgccaggagaggag
aaggaggtggatgtggaagtgttcgccccaaccaaaggccccctggacctttatatcctt
atggacttctccaactccatggttgacgatttgaacaacctgaagaggatgggcacacag
ctggcttctttggtgaaggatctgtcggacgactacaccatcgggtttggaaagttcgtg
gacaaagtggtcgagccccagacagacatgagaccctccaaactgaaggagccgtggccc
aacagcgacccgccgttctctttccagaacgtcatcaagttgaccagcgacgcggcgttc
ttcgacagtgagctccagaaggagaagatatctggcaacctggacgctcctgaaggaggc
tttgatgccatattgcaagctgccgtttgtggggataagatcggctggcgtgacaacagc
acgcatctcctggtcttctccaccgagtcgtccttccactacgagggagacggtgtgaac
gtgctgtcgggcatcttggcgcgcaacgacgagggctgccacctggacgcagcgggcaaa
tacacaaaggatacacagcaggattacccttcaatacccacgctggtccgtctgctgggc
aaacacaacatcattcccatctttgccgtcaccgaccactcctacacgtattacgagaaa
ctccgagagtacttccccatcgcggaaatcggtcgcctgcaagaagactcgtccaacatc
ctgacactcatgcgggtcgcctttgagagtatccgcaggaagatgagcatccgtgcagag
gacaaaccaaaggctttcgtgacaaacttcttggacaccagtggaagagttgtagagcac
ggggcctttgatttcaagcctggcgcaataggcaacttcaagatgcggctctcggcccaa
cagatggtcggcggcaaacctgtctgtcagctggaaccgcttggaaaaaaggggtcaatc
agggtcaaaccgacaacgttcaacgctgccgccaatgttgacgctacaattctgtgtccg
agctgcgagtgtgagaagtccgccatccctgcagcagccaagtgccacggacacggagac
cttgtgtgcgggagatgtcagtgctatgacggctggctgagcaccttctgtaactgctca
gaaagttctgcggctcaggacaccagccggtgtttgggtccggatatgaaagacccgtgt
tccggccgtggggactgcctggagtgcgggacctgtgtgtgctacaatccggatcagttt
gaaggggaatactgtcagtacgacaagacagattgtcaaagatatggcggcttcctctgc
aacgaccgcggctcttgtatccggggtcggtgtgcgtgcaatgagggctgggcaggcaac
gcctgcgagtgtcccaacagcaacgcgacctgtctggacagcaagggcggcgtctgtaat
gggcgaggagaatgtgtctgcggacgctgtaagtgtcccgagtccgacatgagtatgact
tccacgtgtgccccaaatttcgaggcccagttgggtgtttgcgagggcacgaggtcttgc
gtccagtgtcaggcctggaaaacaggagagaagaaagacaaaacgcaatgcgacaaatgc
cccttcaaaattgtcttggtggatgaactcaaagaagaaaaggacgtggcgcattcatgc
agtttccgtgacgaggaggatgactgtacgtaccgctacaacgttgaggactggaaacct
gattccaaagttaaagagctgcagttccaggtgctcaaaaaaaaagattgtccccctgcc
agcctcctgtggttgctcccactcctcttgttcctcttgttgctgctggcacttctgctg
ctgtgctgctggaaatactgcgcttgctgcaaaacgtgcttccagagctgtcttgccctg
ctgccttgctgtaaaggaggtcgtatggttggcttcaaggaagatgagtatatgttccgc
cagtctctgctcacctcagaccatctggacacgccgatggtgaggaccggcccacccaaa
ggaaccgatgtggttcgctggaaggtcacagataacgtgcaccgatcccccactcacccg
caggttctgatgaagcccaacccgaaagagatcatcccgttccccatctctctgcggcta
aacaggctgttctctgagaacctttctcgacccgactccagagatgccgaacagctccgc
aaggaagttgccgataacctaaatgaggtttacaagcagatccccggcgcccagaaggtg
cagaaaaccttattcagaaagcagaaaaatgccggaaaaaggcaggactttgccatcatg
gacaccgtcctgtctgctcctcgcagcagctaccctgacatcgtcaaactcacccagaaa
aatgtccagtctggaaacctgcatgatctcaaagtggtgcccggctactacacagtggcc
acagatcgagaggctgcaggagccattgagttccaagaaggcgtggggtcggtagacgtc
cacgtgccactctttgtcaaagatgaagacgatgacaagaagcagttgcaagtggaggcc
acggatgtgcctctgggcatcgctgagattggaaaacgttttgtcaacatcactatcata
aaagaacatgccaccggcgtcttctcgttcctccagccggcttacacctacagcaggggg
gacggagtggcccacatccccatcagcaaagagatcattgaagagggaagctcacaggtc
acataccgcacacgggacatcacagctaaggataagaaggactacgtggctatggaaggt
gacctgacctttggtccggaagagacccagaaaatagtgcctgttcgtctgctggaactg
agcgagaaagatggcctcctggcagacaaacaggtcaggcagtttgccattgatcttagc
aacccgcggcaaggcgccaagctgggacgctacccaagaactacggtcaccatcgcagac
gagccagatcccagtgtgatgatgttcaaaaagggctcccagaacttcagcacaacagat
ccaacctacaccatccctgtggtccgcacacgcaaccaggacatcccggccacagtgaaa
tggcgcaccaagaaggcccagcgctttgaattatcggaccttctgaagtttagtcctgga
gagacggagaagaacatagtgatcgacccgagggctcaccctggcccaatccaacctgag
accatccaactggagctgtttgacccgagtgtcaacgctactgttggagagaggaagacc
acccttgtcaatgtcgctgacggaccacattacaaacctttagagatggagcaggtgcag
aataagagcgccgtaaaaggcggtcgccttttctccccaactaaccttaaggccaaagca
actggacccagaaacatccgcctcaactgggacgcagggtctgggaaccccgcggggtac
aaggtaaagtattggatctacggcgacccagagaaagacgcccaggtcttagatgtgaag
tctccccaagctgagttgactgacctgtacccctattgtgactacgagatgagagtgtgc
agctacaatgcattgggtgatggaagcgatacagacattgttacctgccagacacttgag
gatgcgcctggtgaacccggacgtctggcctttaatgtcatcagtccgactgtgactcag
gtcagctggggagagcctgcagagaccaacggcaacatcacggcttacgaggtcatctac
acacccatcgatgacgacctgaaggcagtgggcgctgctaagaaagtaaagatcgacaac
cccaagaagcgaatgctgttgatcgagaacctccagagagcccagacctaccagtacaag
gtccgtgccatgaacagcataggctggggccccttcaaagatgccagcatcaacctggca
tcacagcctactagacctatgtccattcccatcattcccgatgtccctattgtggatgca
gaggcaggagacgagtacgacggctacctgatgtacagcaatgaagtgctgaggaccccc
acaggctctaagacaccgagcgtctctggtgatggctggaaatttgtcaagatggtgggg
tccaacctggatctccgcaaggtgtcctggaaaaagcgagtggacgtcatccccagtcgg
ctcagcacagacacagagacgagctcagatgaggtcccccaccccagctacgcccaaacg
cccctgccagattacacaagtaatgggaaatgggaccagaacttccttttcccaggggga
tcagcgacacgcaacttgtcttcatcgtcctctccgatgtccactgtgggctcaaactac
agaggggcaggcggctccttcaccgaaacaaacaccacatacatgtcagcaggaggctct
cagagaactgacatgatccgaggaggcatgcactcatcggaggtcatcatgaggaagcgc
tcagagaacaggagctacatggatgaaaacatccgggactctattgtgatgggagacgtg
tcgggcaatttcccagatctaagtgggttcggctacgctgggacgcagagcagctttnag
agccagttcagctacagcctgtttgggggcccgagggccnagaccgagtctacggacgtc
aatgacgccctgtacaatctggacagggtgctctatgatgctcgactgtctccgggtatt
ccggacacccccagcagactggtgttctctgccctcggccccactgccctcaaagtcagc
tggcaggagccgcgctgcgacagagacctgcaaggctactgcgttctctaccagctgctc
aacggaggcaagatgaacactgtcaatgtgacgaacccagcagagaactccgttatcatc
caggacctgctgcccaaccagtcctacctatttaaggtgaaggctaagagccaggagggc
tggggtccagagagggagggggtcatcaccatcgagtccgctgtcgaccccaagagtccc
ctcagcccgatgccaggctcgccatttactctcagcactcccagtgctccgggacccctg
gtcttcactgcgctgagccccgactccctgcagctcagctgggagaaaccccgtaaaccc
aacggagacatcctgggatacgtagtcacctgcgaacagctgcatggcggaggagacgta
cggtcctttgaggtgaacggggacaccgctgaaaccagtcttaccgtcccaaacctgact
gagaacatcccctacaagttcaaagttcaggctcgaaccacgcagggcttcggtcctgag
agggagggcatcatcaccattgagtctcaggatggaagctccttgtctcagtacaacagc
caatcaatgtcgagcagggaagttttccaaatgccaacggaggtcagtacgcggatgaac
atctcccacaccatgatggacccttacttctcagatggggcgatgatgaccacgcagcac
atggagaccagcggcatggtgactcgccaagtcaccaaggaggtagttcagcggagcgtc
atgggaggaaccacggtcactaagaagatgttttacgaatcgtaa
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integrated database retrieval system
